|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1830082..1831330- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_45080-T1 ID=CAN33_45080-T1|Name=CAN33_45080-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1249bp|location=Sequence derived from alignment at NKJJ01000022.1:1830082..1831330- (Aspergillus niger FDAARGOS_311)
ATGAGTGACGCCGCAACAGGCGTGGCGCGGGGGAAAAGACATGCGGCCTG
TGATGAGTGCAGTATGTCTGACTTCTTGTCAAGATGAAGTACAAATTGTC
TGGTGCTAATCATGTTTCATCATTCTAGGAAGTCGCAAGCTGAAATGCTC
AGGGGAAGCTACTGGCTGCACTCGCTGCATTAAACAAAGTCTCACTTGCC
ACTACTCTCTACAGAAACAGATGGGACGGCCCCCAAAGAAGCGAATGCGA
GAAGATGAGGATCCATCACCACCTTTCGGCCTACCAGGGAATGAGCCATG
GACCAGTGAATCGGATTTTGCTTCCCTTGGACCGTCGACCATAGAGTCAA
CCGAGACCGCCCCATCAGACTACAGCGGGCAGATAAATTTCTTTACGGAC
GCAAATAGCAACATTGACGCTGGGCAATTCCTCCTCAACAAGCCGATAGA
TGCAGCACCAACGACAGTCAGTCCATGGCCTGATTTCTCCAATGTCTCTT
CATCAGCAGCCAATCTTTACACTCTCCCACCAGATCTATCCTTACTCCAA
CAGTCCTCTGCCGCCTCGTCTCCGAACTCAGAGGAATCTGACCGCCAGTG
CCCTTGTCTATCCTGCCTCTACCTCTGTCTCAGCCACCTGTCTTCTCTCG
CCCCATTCCCCCTCTCCCACCACAACCTATGCTCCCTCTACATCGCATCC
AGAACCGCCCGAGCCGTCATCCGCTGCCAGATCTGTCCCCTCCGCTTCAC
AACAGGCATGCAAAATGTCACCTTCACCGGCACCTTATTGACCGTCATCG
CCGATACCTGGCTACGCATATCCAAAGTTAACGCCGTCGACTTCGGCCGA
CAATCGGCACCACCGGCTTACGCCGCAGCAATAGATGCCTCCCCCAACCC
TGCAAAAGGCTGGGAGGACTGGCTACGGCAAACCGTGCGATACCGTGTAA
TAGGAGGGCCGTGTGATCCGGCCGGTATGCCCCCGGGTGCAGATGATGGA
CCTAGTCTGCTTAGCCTTATAGAGGAAATGGAGGAGCGGCAACGGCGTTG
GCATCGTTCACACCCGCTGCCTGTCGAGGAACGTCATCTTCCTATACCGA
AGACGGACGGGTCCAAGGAGGAGGAATCGTGCCATGAGCGGGATGCGCTG
TGCATGCGCATCATTCAGAGCGCGCGCAATGTCATTCCAAAGTTTGGTTT
CCAGCCAAGTGATTATCCGGATGATGCGGTTGCCAAGAAGACCGCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1830082..1831330- >CAN33_45080-T1 ID=CAN33_45080-T1|Name=CAN33_45080-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2364bp|location=Sequence derived from alignment at NKJJ01000022.1:1830082..1831330- (Aspergillus niger FDAARGOS_311)
GAAGTCGCAAGCTGAAATGCTCAGGGGAAGCTACTGGCTGCACTCGCTGC
ATTAAACAAAGTCTCACTTGCCACTACTCTCTACAGAAACAGATGGGACG
GCCCCCAAAGAAGCGAATGCGAGAAGATGAGGATCCATCACCACCTTTCG
GCCTACCAGGGAATGAGCCATGGACCAGTGAATCGGATTTTGCTTCCCTT
GGACCGTCGACCATAGAGTCAACCGAGACCGCCCCATCAGACTACAGCGG
GCAGATAAATTTCTTTACGGACGCAAATAGCAACATTGACGCTGGGCAAT
TCCTCCTCAACAAGCCGATAGATGCAGCACCAACGACAGTCAGTCCATGG
CCTGATTTCTCCAATGTCTCTTCATCAGCAGCCAATCTTTACACTCTCCC
ACCAGATCTATCCTTACTCCAACAGTCCTCTGCCGCCTCGTCTCCGAACT
CAGAGGAATCTGACCGCCAGTGCCCTTGTCTATCCTGCCTCTACCTCTGT
CTCAGCCACCTGTCTTCTCTCGCCCCATTCCCCCTCTCCCACCACAACCT
ATGCTCCCTCTACATCGCATCCAGAACCGCCCGAGCCGTCATCCGCTGCC
AGATCTGTCCCCTCCGCTTCACAACAGGCATGCAAAATGTCACCTTCACC
GGCACCTTATTGACCGTCATCGCCGATACCTGGCTACGCATATCCAAAGT
TAACGCCGTCGACTTCGGCCGACAATCGGCACCACCGGCTTACGCCGCAG
CAATAGATGCCTCCCCCAACCCTGCAAAAGGCTGGGAGGACTGGCTACGG
CAAACCGTGCGATACCGTGTAATAGGAGGGCCGTGTGATCCGGCCGGTAT
GCCCCCGGGTGCAGATGATGGACCTAGTCTGCTTAGCCTTATAGAGGAAA
TGGAGGAGCGGCAACGGCGTTGGCATCGTTCACACCCGCTGCCTGTCGAG
GAACGTCATCTTCCTATACCGAAGACGGACGGGTCCAAGGAGGAGGAATC
GTGCCATGAGCGGGATGCGCTGTGCATGCGCATCATTCAGAGCGCGCGCA
ATGTCATTCCAAAGTTTGGTTTCCAGCCAAGTGATTATCCGGATGATGCG
GTTGCCAAGAAGACCGCTTGAATGAGTGACGCCGCAACAGGCGTGGCGCG
GGGGAAAAGACATGCGGCCTGTGATGAGTGCAGAAGTCGCAAGCTGAAAT
GCTCAGGGGAAGCTACTGGCTGCACTCGCTGCATTAAACAAAGTCTCACT
TGCCACTACTCTCTACAGAAACAGATGGGACGGCCCCCAAAGAAGCGAAT
GCGAGAAGATGAGGATCCATCACCACCTTTCGGCCTACCAGGGAATGAGC
CATGGACCAGTGAATCGGATTTTGCTTCCCTTGGACCGTCGACCATAGAG
TCAACCGAGACCGCCCCATCAGACTACAGCGGGCAGATAAATTTCTTTAC
GGACGCAAATAGCAACATTGACGCTGGGCAATTCCTCCTCAACAAGCCGA
TAGATGCAGCACCAACGACAGTCAGTCCATGGCCTGATTTCTCCAATGTC
TCTTCATCAGCAGCCAATCTTTACACTCTCCCACCAGATCTATCCTTACT
CCAACAGTCCTCTGCCGCCTCGTCTCCGAACTCAGAGGAATCTGACCGCC
AGTGCCCTTGTCTATCCTGCCTCTACCTCTGTCTCAGCCACCTGTCTTCT
CTCGCCCCATTCCCCCTCTCCCACCACAACCTATGCTCCCTCTACATCGC
ATCCAGAACCGCCCGAGCCGTCATCCGCTGCCAGATCTGTCCCCTCCGCT
TCACAACAGGCATGCAAAATGTCACCTTCACCGGCACCTTATTGACCGTC
ATCGCCGATACCTGGCTACGCATATCCAAAGTTAACGCCGTCGACTTCGG
CCGACAATCGGCACCACCGGCTTACGCCGCAGCAATAGATGCCTCCCCCA
ACCCTGCAAAAGGCTGGGAGGACTGGCTACGGCAAACCGTGCGATACCGT
GTAATAGGAGGGCCGTGTGATCCGGCCGGTATGCCCCCGGGTGCAGATGA
TGGACCTAGTCTGCTTAGCCTTATAGAGGAAATGGAGGAGCGGCAACGGC
GTTGGCATCGTTCACACCCGCTGCCTGTCGAGGAACGTCATCTTCCTATA
CCGAAGACGGACGGGTCCAAGGAGGAGGAATCGTGCCATGAGCGGGATGC
GCTGTGCATGCGCATCATTCAGAGCGCGCGCAATGTCATTCCAAAGTTTG
GTTTCCAGCCAAGTGATTATCCGGATGATGCGGTTGCCAAGAAGACCGCT
TGAATGAGTGACGCCGCAACAGGCGTGGCGCGGGGGAAAAGACATGCGGC
CTGTGATGAGTGCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | Fungal Zn(2)-Cys(6) binuclear cluster domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1830082..1831330 - |
|
