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CAN33_45200-T1, CAN33_45200-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45200-T1
Unique NameCAN33_45200-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1883640..1884270+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45200-T1 ID=CAN33_45200-T1|Name=CAN33_45200-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=631bp|location=Sequence derived from alignment at NKJJ01000022.1:1883640..1884270+ (Aspergillus niger FDAARGOS_311)
ATGGGTAAGGGACAGCCCCGTGGTTTGAACGCCGCCCGCAAGCTCGCGAC
CACCCGTCGCGAGAACCGCTGGGCCGATCTGCACTACAAGAAGCGCCTCC
TCGGTACTGCCTACAAGTCCTCTCCCTTCGGAGGTGCCTCCCACGCCAAG
GGTATCGTTCTTGAGAAGGTCGGTGTTGAGGCCAAGCAGCCCAACTCCGC
TATTCGCAAGTGTGTCAAGGTCCAGCTCATCAAGAACGGCAAGAAGGTTA
CCGCTTTCGGTGGGTGATCCTATCCTTTTCTTTTTCTATTTCCCGGTTGT
GATGGATGTTTATGGTTTGGGGATTTTGTGATGGGATATTGTGCGGAGAA
TGGAGCAGAAGAAGGAGAAGGGAATAAAGGACGGAGTGGCAAACGGGAAA
TATCGCATATTCTTTAAGAGGGTATCGATTGGCTAACATATTTCCTGTAT
AGTCCCCAACGATGGTTGCTTGAACTTCATCGATGAGAACGACGAGGTCC
TCCTCGCCGGTTTCGGTCGTAAGGGCAAGGCCAAGGGTGATATTCCCGGT
GTCCGTTTCAAGGTCGTCAAGGTTTCCGGTGTCGGTCTGCTCGCTCTCTG
GAAGGAGAAGAAGGAGAAGCCCCGCTCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1883640..1884270+

>CAN33_45200-T1 ID=CAN33_45200-T1|Name=CAN33_45200-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=876bp|location=Sequence derived from alignment at NKJJ01000022.1:1883640..1884270+ (Aspergillus niger FDAARGOS_311)
ATGGGTAAGGGACAGCCCCGTGGTTTGAACGCCGCCCGCAAGCTCGCGAC
CACCCGTCGCGAGAACCGCTGGGCCGATCTGCACTACAAGAAGCGCCTCC
TCGGTACTGCCTACAAGTCCTCTCCCTTCGGAGGTGCCTCCCACGCCAAG
GGTATCGTTCTTGAGAAGGTCGGTGTTGAGGCCAAGCAGCCCAACTCCGC
TATTCGCAAGTGTGTCAAGGTCCAGCTCATCAAGAACGGCAAGAAGGTTA
CCGCTTTCGTCCCCAACGATGGTTGCTTGAACTTCATCGATGAGAACGAC
GAGGTCCTCCTCGCCGGTTTCGGTCGTAAGGGCAAGGCCAAGGGTGATAT
TCCCGGTGTCCGTTTCAAGGTCGTCAAGGTTTCCGGTGTCGGTCTGCTCG
CTCTCTGGAAGGAGAAGAAGGAGAAGCCCCGCTCTTAAATGGGTAAGGGA
CAGCCCCGTGGTTTGAACGCCGCCCGCAAGCTCGCGACCACCCGTCGCGA
GAACCGCTGGGCCGATCTGCACTACAAGAAGCGCCTCCTCGGTACTGCCT
ACAAGTCCTCTCCCTTCGGAGGTGCCTCCCACGCCAAGGGTATCGTTCTT
GAGAAGGTCGGTGTTGAGGCCAAGCAGCCCAACTCCGCTATTCGCAAGTG
TGTCAAGGTCCAGCTCATCAAGAACGGCAAGAAGGTTACCGCTTTCGTCC
CCAACGATGGTTGCTTGAACTTCATCGATGAGAACGACGAGGTCCTCCTC
GCCGGTTTCGGTCGTAAGGGCAAGGCCAAGGGTGATATTCCCGGTGTCCG
TTTCAAGGTCGTCAAGGTTTCCGGTGTCGGTCTGCTCGCTCTCTGGAAGG
AGAAGAAGGAGAAGCCCCGCTCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS23CAN33_45200Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45200-T1.exon1CAN33_45200-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_45200-T1.exon2CAN33_45200-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45200-T1.cdsCAN33_45200-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45200-T1CAN33_45200-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005680
DBxrefInterPro:IPR006032
DBxrefPFAM:PF00164
Product40S ribosomal protein S23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1883640..1884270 +
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