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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2053415..2054200+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_45490-T1 ID=CAN33_45490-T1|Name=CAN33_45490-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=786bp|location=Sequence derived from alignment at NKJJ01000022.1:2053415..2054200+ (Aspergillus niger FDAARGOS_311)
ATGTTTAAGAAGGAGTGAGTGAAAACCAGCATAGTCATTACTACAGAACA
CCCATCAACTTCATCCATTTATTCCCCAATCCACCACCCTCCCTACAGCC
CAATCCCTCCTCACAGCTAGCTACCAAGCAGAACAACCAACTAACAACTC
AAACCACCATGATAACAGCATCCCCCCCAGCAACCGCTCAAAAGTCAAAT
CCTCCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGC
TTCGAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGC
CGTGAAGCTGTACGGTCCCCCAATACCTACCTTCCTTCATACCCTTTCCC
CCTTCCCACAAACTAACTAACCCAACCCAACCCATAGTCCGGAAAGATCA
ACCCTCTACACCCACAACAACACCCCCTCTTCTACCAACCCATGGACGGC
CCACCCATCCCGCACCTGAAACTGCTCCACGCATACCCTGACGCTCTCCC
GACAATCCAAATCGACCGCGGCGCCATCCGCTTCGTGCTCTCGGGCGCGG
CGCTCATGGCGCCTGGGTTAACGAGTGCCGGGGGTAGATTGCCTGATGTC
GAGAATGGGGAGAAGGAGATCCCTGCGGGTGAGGTCGTGGCGGTGAAGGC
GGAGGGGAAGGAGTTTGTTTGTCTGGTCGGGGTGTTGAAGGTGGGTACGG
AGGAGATTAAGAAGGTCGGGAAGGGTGTGGTGCTTGATGAGGGGCATTAT
TTGGGGGATGGGTTGTGGAGGTATCATCTTGATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2053415..2054200+ >CAN33_45490-T1 ID=CAN33_45490-T1|Name=CAN33_45490-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1638bp|location=Sequence derived from alignment at NKJJ01000022.1:2053415..2054200+ (Aspergillus niger FDAARGOS_311)
ATGTTTAAGAAGGACATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCTC
CGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCTTCG
AACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCCTCC
GGAAAGATCAACCCTCTACACCCACAACAACACCCCCTCTTCTACCAACC
CATGGACGGCCCACCCATCCCGCACCTGAAACTGCTCCACGCATACCCTG
ACGCTCTCCCGACAATCCAAATCGACCGCGGCGCCATCCGCTTCGTGCTC
TCGGGCGCGGCGCTCATGGCGCCTGGGTTAACGAGTGCCGGGGGTAGATT
GCCTGATGTCGAGAATGGGGAGAAGGAGATCCCTGCGGGTGAGGTCGTGG
CGGTGAAGGCGGAGGGGAAGGAGTTTGTTTGTCTGGTCGGGGTGTTGAAG
GTGGGTACGGAGGAGATTAAGAAGGTCGGGAAGGGTGTGGTGCTTGATGA
GGGGCATTATTTGGGGGATGGGTTGTGGAGGTATCATCTTGATTGAATGT
TTAAGAAGGACATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCTCCGTG
CAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCTTCGAACC
CTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCCTCCGGAA
AGATCAACCCTCTACACCCACAACAACACCCCCTCTTCTACCAACCCATG
GACGGCCCACCCATCCCGCACCTGAAACTGCTCCACGCATACCCTGACGC
TCTCCCGACAATCCAAATCGACCGCGGCGCCATCCGCTTCGTGCTCTCGG
GCGCGGCGCTCATGGCGCCTGGGTTAACGAGTGCCGGGGGTAGATTGCCT
GATGTCGAGAATGGGGAGAAGGAGATCCCTGCGGGTGAGGTCGTGGCGGT
GAAGGCGGAGGGGAAGGAGTTTGTTTGTCTGGTCGGGGTGTTGAAGGTGG
GTACGGAGGAGATTAAGAAGGTCGGGAAGGGTGTGGTGCTTGATGAGGGG
CATTATTTGGGGGATGGGTTGTGGAGGTATCATCTTGATTGAATGTTTAA
GAAGGACATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCTCCGTGCAGC
GCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCTTCGAACCCTAC
ATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCCTCCGGAAAGAT
CAACCCTCTACACCCACAACAACACCCCCTCTTCTACCAACCCATGGACG
GCCCACCCATCCCGCACCTGAAACTGCTCCACGCATACCCTGACGCTCTC
CCGACAATCCAAATCGACCGCGGCGCCATCCGCTTCGTGCTCTCGGGCGC
GGCGCTCATGGCGCCTGGGTTAACGAGTGCCGGGGGTAGATTGCCTGATG
TCGAGAATGGGGAGAAGGAGATCCCTGCGGGTGAGGTCGTGGCGGTGAAG
GCGGAGGGGAAGGAGTTTGTTTGTCTGGTCGGGGTGTTGAAGGTGGGTAC
GGAGGAGATTAAGAAGGTCGGGAAGGGTGTGGTGCTTGATGAGGGGCATT
ATTTGGGGGATGGGTTGTGGAGGTATCATCTTGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264RQY |
| DBxref | InterPro:IPR015947 |
| DBxref | InterPro:IPR041366 |
| DBxref | InterPro:IPR016437 |
| DBxref | InterPro:IPR036974 |
| DBxref | InterPro:IPR004521 |
| DBxref | InterPro:IPR002478 |
| DBxref | PFAM:PF01472 |
| DBxref | PFAM:PF17832 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2053415..2054200 + |
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