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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2100735..2101814- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_45580-T1 ID=CAN33_45580-T1|Name=CAN33_45580-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1080bp|location=Sequence derived from alignment at NKJJ01000022.1:2100735..2101814- (Aspergillus niger FDAARGOS_311)
ATGCCTTTGAACCTAGTTCGGTGCGGAGGGGGTGTCCTCCAACACCTCCA
GCTTAGCGAGGCCTTCTCTCGTCCGGTCCGCCAGGCCATCTCCCAGAGCC
ATGTTAGGCGCATGTCCCTCGCCGCTCTGAGTCGCTTCTCGACCCCCAAT
GTCAGATATGCGCCTCTTTCCGCTGCACTCTCCGGACACCTGACCAGCAG
CTATGCGACTGCGGCTTCCCCCAAGGGGCGCGCCGGCACCAAATCCTCTT
CCACCAAGACGACGAAGTCTACCAAGTCCACCAAGACTACCAAGAAGCCT
CGGGCAAAGAAGGAACTTACTGAAGAGCAGAAGGCGGCCAAGAAGGAAGC
TAAGGAGAAGAGCGACCTGAGGCAGCTTGTTAAGCAGCTGAAGGCCGCCT
CCCTTACGCCGCCCAAGAGGCTCACCAACCACTTCACCCTGACCATGCTC
AGCAAGCTTGAAGAGGTCAAGAAGGAAGGAAAGGGATTGAAGGGCAAGGA
GGCATTCAAGGAGGCCGCCGAACGTGCCAAGAACATTAGTGAAGCCGAGC
GCGAGGTTCATTGTTCCCTTCCAGAGACATGAGACGTTCCATGATACTGA
CGTCTGCTTACAGCAATTTGTCGCTACTGCTGCTACCAACAAGGAAGCCT
ACGAGAAGGAATACAAGGAGTGGCTCGACTCGCACAGTCCCCTGGAGATC
AAGCAAGCCAATGACGCCAGGCGAAGACTTGCCCAGATTCAGAACAAGAA
GTTCTTCCCTCTTCATGACCCTCGCCTGGTCAAGCGCTCTAAGATCGCGT
ATCTATTTTACGCCGAGGAACGCCATCAGGCTGGCGACCTAAAGTACATG
CCCATCCCCGAACGTGGTGTGCGAATTGCGGAAGAATGGCGAGGCATGAC
CGCTGCAGAGAAACAGGTATGCACGATGCGCCTCTCTCGGACTGTTGTCA
GAAGGAATGCTAATGCAGCGAGCAGAAATACGTGCGACTTCAAGAAGTTG
ATGCCGAACGGTACGCCCGGGAATACAAGGTCGTCTATGGCGAGGATCCC
CCCTATGTGGGAAAGAACGCGACGAAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2100735..2101814- >CAN33_45580-T1 ID=CAN33_45580-T1|Name=CAN33_45580-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2889bp|location=Sequence derived from alignment at NKJJ01000022.1:2100735..2101814- (Aspergillus niger FDAARGOS_311)
AAATACGTGCGACTTCAAGAAGTTGATGCCGAACGGTACGCCCGGGAATA
CAAGGTCGTCTATGGCGAGGATCCCCCCTATGTGGGAAAGAACGCGACGA
AATGACAATTTGTCGCTACTGCTGCTACCAACAAGGAAGCCTACGAGAAG
GAATACAAGGAGTGGCTCGACTCGCACAGTCCCCTGGAGATCAAGCAAGC
CAATGACGCCAGGCGAAGACTTGCCCAGATTCAGAACAAGAAGTTCTTCC
CTCTTCATGACCCTCGCCTGGTCAAGCGCTCTAAGATCGCGTATCTATTT
TACGCCGAGGAACGCCATCAGGCTGGCGACCTAAAGTACATGCCCATCCC
CGAACGTGGTGTGCGAATTGCGGAAGAATGGCGAGGCATGACCGCTGCAG
AGAAACAGATGCCTTTGAACCTAGTTCGGTGCGGAGGGGGTGTCCTCCAA
CACCTCCAGCTTAGCGAGGCCTTCTCTCGTCCGGTCCGCCAGGCCATCTC
CCAGAGCCATGTTAGGCGCATGTCCCTCGCCGCTCTGAGTCGCTTCTCGA
CCCCCAATGTCAGATATGCGCCTCTTTCCGCTGCACTCTCCGGACACCTG
ACCAGCAGCTATGCGACTGCGGCTTCCCCCAAGGGGCGCGCCGGCACCAA
ATCCTCTTCCACCAAGACGACGAAGTCTACCAAGTCCACCAAGACTACCA
AGAAGCCTCGGGCAAAGAAGGAACTTACTGAAGAGCAGAAGGCGGCCAAG
AAGGAAGCTAAGGAGAAGAGCGACCTGAGGCAGCTTGTTAAGCAGCTGAA
GGCCGCCTCCCTTACGCCGCCCAAGAGGCTCACCAACCACTTCACCCTGA
CCATGCTCAGCAAGCTTGAAGAGGTCAAGAAGGAAGGAAAGGGATTGAAG
GGCAAGGAGGCATTCAAGGAGGCCGCCGAACGTGCCAAGAACATTAGTGA
AGCCGAGCGCGAGAAATACGTGCGACTTCAAGAAGTTGATGCCGAACGGT
ACGCCCGGGAATACAAGGTCGTCTATGGCGAGGATCCCCCCTATGTGGGA
AAGAACGCGACGAAATGACAATTTGTCGCTACTGCTGCTACCAACAAGGA
AGCCTACGAGAAGGAATACAAGGAGTGGCTCGACTCGCACAGTCCCCTGG
AGATCAAGCAAGCCAATGACGCCAGGCGAAGACTTGCCCAGATTCAGAAC
AAGAAGTTCTTCCCTCTTCATGACCCTCGCCTGGTCAAGCGCTCTAAGAT
CGCGTATCTATTTTACGCCGAGGAACGCCATCAGGCTGGCGACCTAAAGT
ACATGCCCATCCCCGAACGTGGTGTGCGAATTGCGGAAGAATGGCGAGGC
ATGACCGCTGCAGAGAAACAGATGCCTTTGAACCTAGTTCGGTGCGGAGG
GGGTGTCCTCCAACACCTCCAGCTTAGCGAGGCCTTCTCTCGTCCGGTCC
GCCAGGCCATCTCCCAGAGCCATGTTAGGCGCATGTCCCTCGCCGCTCTG
AGTCGCTTCTCGACCCCCAATGTCAGATATGCGCCTCTTTCCGCTGCACT
CTCCGGACACCTGACCAGCAGCTATGCGACTGCGGCTTCCCCCAAGGGGC
GCGCCGGCACCAAATCCTCTTCCACCAAGACGACGAAGTCTACCAAGTCC
ACCAAGACTACCAAGAAGCCTCGGGCAAAGAAGGAACTTACTGAAGAGCA
GAAGGCGGCCAAGAAGGAAGCTAAGGAGAAGAGCGACCTGAGGCAGCTTG
TTAAGCAGCTGAAGGCCGCCTCCCTTACGCCGCCCAAGAGGCTCACCAAC
CACTTCACCCTGACCATGCTCAGCAAGCTTGAAGAGGTCAAGAAGGAAGG
AAAGGGATTGAAGGGCAAGGAGGCATTCAAGGAGGCCGCCGAACGTGCCA
AGAACATTAGTGAAGCCGAGCGCGAGAAATACGTGCGACTTCAAGAAGTT
GATGCCGAACGGTACGCCCGGGAATACAAGGTCGTCTATGGCGAGGATCC
CCCCTATGTGGGAAAGAACGCGACGAAATGACAATTTGTCGCTACTGCTG
CTACCAACAAGGAAGCCTACGAGAAGGAATACAAGGAGTGGCTCGACTCG
CACAGTCCCCTGGAGATCAAGCAAGCCAATGACGCCAGGCGAAGACTTGC
CCAGATTCAGAACAAGAAGTTCTTCCCTCTTCATGACCCTCGCCTGGTCA
AGCGCTCTAAGATCGCGTATCTATTTTACGCCGAGGAACGCCATCAGGCT
GGCGACCTAAAGTACATGCCCATCCCCGAACGTGGTGTGCGAATTGCGGA
AGAATGGCGAGGCATGACCGCTGCAGAGAAACAGATGCCTTTGAACCTAG
TTCGGTGCGGAGGGGGTGTCCTCCAACACCTCCAGCTTAGCGAGGCCTTC
TCTCGTCCGGTCCGCCAGGCCATCTCCCAGAGCCATGTTAGGCGCATGTC
CCTCGCCGCTCTGAGTCGCTTCTCGACCCCCAATGTCAGATATGCGCCTC
TTTCCGCTGCACTCTCCGGACACCTGACCAGCAGCTATGCGACTGCGGCT
TCCCCCAAGGGGCGCGCCGGCACCAAATCCTCTTCCACCAAGACGACGAA
GTCTACCAAGTCCACCAAGACTACCAAGAAGCCTCGGGCAAAGAAGGAAC
TTACTGAAGAGCAGAAGGCGGCCAAGAAGGAAGCTAAGGAGAAGAGCGAC
CTGAGGCAGCTTGTTAAGCAGCTGAAGGCCGCCTCCCTTACGCCGCCCAA
GAGGCTCACCAACCACTTCACCCTGACCATGCTCAGCAAGCTTGAAGAGG
TCAAGAAGGAAGGAAAGGGATTGAAGGGCAAGGAGGCATTCAAGGAGGCC
GCCGAACGTGCCAAGAACATTAGTGAAGCCGAGCGCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036910 |
| DBxref | InterPro:IPR009071 |
| DBxref | PFAM:PF09011 |
| DBxref | PFAM:PF00505 |
| Product | HMG (high mobility group) box family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2100735..2101814 - |
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