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CAN33_45810-T1, CAN33_45810-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45810-T1
Unique NameCAN33_45810-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2270932..2271763-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45810-T1 ID=CAN33_45810-T1|Name=CAN33_45810-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=832bp|location=Sequence derived from alignment at NKJJ01000022.1:2270932..2271763- (Aspergillus niger FDAARGOS_311)
ATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCG
ATCTCTCGAGACTCAGGTACGAGCATCGCTTCCCTGTCATACGGAATGGA
AATCCTAACAATGTGTATACATGATCATAGACCGAGAACCTCTTCCACAC
ATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCGGAGG
AAGAACAGCGGATCGAATCGCAGCTCAAAGACCTCCTAGAACGAGTACGC
ATCCACTATGCCCATTCCATCACAGTTACCATCCTAATACCACAATCACA
TGAACTAATCTAATGGATCAATCACCAGCGCGACTCTCTGATCTCCCAAC
TCGCCCGCCTCCTCGACTCCGAAGCAACCCTCACCTCCTCCGCCCTCAAA
CAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGA
ACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATC
TCCTCTCCAACGTCCGCTCCGATATCGATGCCTACCGCAACTCGAACCCG
GGTCAGGCGGAAGCAGATTACATGCTTGAGGAGCGGGGTCGGATTGATGA
GAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATG
AGAACTTTGGTCTGCAGCGTGAGACGCTCGCTAGTATTAATCGACGCATT
GTGGGCGCGGCGAACTCGGTGCCGGGCATGAATGCGTTGATTGGGAAGAT
CGGGTCCAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGT
TTTGCTTTTTGATGTTGCTTTGGTTGAGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2270932..2271763-

>CAN33_45810-T1 ID=CAN33_45810-T1|Name=CAN33_45810-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2052bp|location=Sequence derived from alignment at NKJJ01000022.1:2270932..2271763- (Aspergillus niger FDAARGOS_311)
CGCGACTCTCTGATCTCCCAACTCGCCCGCCTCCTCGACTCCGAAGCAAC
CCTCACCTCCTCCGCCCTCAAACAAAACAACCTCGCCCGCCACCGCGAAG
TCCTCCACGACCACCGTCGTGAACTACAGCGTCTCAAATCTGCCATCGCC
GAATCCCGCGACCGCGCTAATCTCCTCTCCAACGTCCGCTCCGATATCGA
TGCCTACCGCAACTCGAACCCGGGTCAGGCGGAAGCAGATTACATGCTTG
AGGAGCGGGGTCGGATTGATGAGAGCCATAATATGATTGATGGGGTGTTG
AGTCAGGCTTACGCTATTAATGAGAACTTTGGTCTGCAGCGTGAGACGCT
CGCTAGTATTAATCGACGCATTGTGGGCGCGGCGAACTCGGTGCCGGGCA
TGAATGCGTTGATTGGGAAGATCGGGTCCAAGAGGAGACGGGATGCGTTG
ATTTTGGGGGCTTTTATTGGGTTTTGCTTTTTGATGTTGCTTTGGTTGAG
GTGAACCGAGAACCTCTTCCACACATACTCTCAATATGCTTCGTTAACGA
AGCTCCCACCCACACCCTCGGAGGAAGAACAGCGGATCGAATCGCAGCTC
AAAGACCTCCTAGAACGAATGGCCACCTCAACCGGTACCGGCTGGGCTCA
GCTCCGGCAGCAAGCCCGATCTCTCGAGACTCAGCGCGACTCTCTGATCT
CCCAACTCGCCCGCCTCCTCGACTCCGAAGCAACCCTCACCTCCTCCGCC
CTCAAACAAAACAACCTCGCCCGCCACCGCGAAGTCCTCCACGACCACCG
TCGTGAACTACAGCGTCTCAAATCTGCCATCGCCGAATCCCGCGACCGCG
CTAATCTCCTCTCCAACGTCCGCTCCGATATCGATGCCTACCGCAACTCG
AACCCGGGTCAGGCGGAAGCAGATTACATGCTTGAGGAGCGGGGTCGGAT
TGATGAGAGCCATAATATGATTGATGGGGTGTTGAGTCAGGCTTACGCTA
TTAATGAGAACTTTGGTCTGCAGCGTGAGACGCTCGCTAGTATTAATCGA
CGCATTGTGGGCGCGGCGAACTCGGTGCCGGGCATGAATGCGTTGATTGG
GAAGATCGGGTCCAAGAGGAGACGGGATGCGTTGATTTTGGGGGCTTTTA
TTGGGTTTTGCTTTTTGATGTTGCTTTGGTTGAGGTGAACCGAGAACCTC
TTCCACACATACTCTCAATATGCTTCGTTAACGAAGCTCCCACCCACACC
CTCGGAGGAAGAACAGCGGATCGAATCGCAGCTCAAAGACCTCCTAGAAC
GAATGGCCACCTCAACCGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCC
CGATCTCTCGAGACTCAGCGCGACTCTCTGATCTCCCAACTCGCCCGCCT
CCTCGACTCCGAAGCAACCCTCACCTCCTCCGCCCTCAAACAAAACAACC
TCGCCCGCCACCGCGAAGTCCTCCACGACCACCGTCGTGAACTACAGCGT
CTCAAATCTGCCATCGCCGAATCCCGCGACCGCGCTAATCTCCTCTCCAA
CGTCCGCTCCGATATCGATGCCTACCGCAACTCGAACCCGGGTCAGGCGG
AAGCAGATTACATGCTTGAGGAGCGGGGTCGGATTGATGAGAGCCATAAT
ATGATTGATGGGGTGTTGAGTCAGGCTTACGCTATTAATGAGAACTTTGG
TCTGCAGCGTGAGACGCTCGCTAGTATTAATCGACGCATTGTGGGCGCGG
CGAACTCGGTGCCGGGCATGAATGCGTTGATTGGGAAGATCGGGTCCAAG
AGGAGACGGGATGCGTTGATTTTGGGGGCTTTTATTGGGTTTTGCTTTTT
GATGTTGCTTTGGTTGAGGTGAACCGAGAACCTCTTCCACACATACTCTC
AATATGCTTCGTTAACGAAGCTCCCACCCACACCCTCGGAGGAAGAACAG
CGGATCGAATCGCAGCTCAAAGACCTCCTAGAACGAATGGCCACCTCAAC
CGGTACCGGCTGGGCTCAGCTCCGGCAGCAAGCCCGATCTCTCGAGACTC
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005801cis-Golgi network
GO:0016021integral component of membrane
GO:0000139Golgi membrane
Vocabulary: Biological Process
TermDefinition
GO:0006888endoplasmic reticulum to Golgi vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_45810CAN33_45810Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45810-T1CAN33_45810-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45810-T1.cdsCAN33_45810-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45810-T1.exon3CAN33_45810-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_45810-T1.exon2CAN33_45810-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_45810-T1.exon1CAN33_45810-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09265AL8
DBxrefInterPro:IPR023601
DBxrefPFAM:PF12352
ProductSnare region anchored in the vesicle membrane C-terminus family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2270932..2271763 -
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