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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2493837..2495219- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_46150-T1 ID=CAN33_46150-T1|Name=CAN33_46150-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1383bp|location=Sequence derived from alignment at NKJJ01000022.1:2493837..2495219- (Aspergillus niger FDAARGOS_311)
ATGGCTCATGCAGCTAGCTCCTACAAGTTGGTGCGACCTAAGATGGTGCA
AGAAGATGTTATCAAGATCAAGGGTGGCAGGTAAGACAGCTGGCGCGCAC
ATGTGCCCAGAAAGCTAATTTAAAAGAAGACATATCCTACAAGAGCTGAC
AGTCTCGTCTTATGTGCCCAATGATACCTATCTAATTGGCAGAAGAACAC
AGAGAGAGTCGGTGGAACCAATCTGCACAACACTCAAGCCATACGAGAAT
GACTGTGAACCAAGCATGCTACTACTTACAGGACCGAATTACTCTGGGAA
GAGCGTTTACATGAAGCAGGTGAGCTTCTACTCTGGCACCAATGAAAGCT
AGCTGATGAGGTGCTATGCAGGTAGCTCTCATCATCTATCTAGCGCAGGT
GGGAAGGTATGCAACACCTGGTCCAAGAAAATCAAAGCCATAATACTCAG
CATAATAGCTTTGTCCCAGCTGAAAGCGCAGAACTTGGGATCATCGACAA
AATCTTGGTCAAGTCAAACACTCAAGATAGCGTCTCCCAAGTAAGTTGGT
GAGCCGTCTATCATACTAAAAATCTAACTTTTTGCACGCAACACAGATAC
AAAGTACCTTCATGAACGATCTGCAGCAGCTATCATTTGACCTGAAGCAG
GTAACCGGCCATAGTCTGCTGTTGATAGATGAGTTCGGTAAAGGCACCAA
TGAGTATGGTTCGTATACCCACAACCTCGAATGTCTAGCCAGAAGCTGAA
ACTCTCAGATGGAATCGGACTGGCATGCGGAGTCCTCGAGAACCTACTAA
ACCGTGAAGATGCTCCCAAAGTCATAGCGGCAACGCATTTTCATGAGATT
CTCGCAAACGGATACCTCAAACCCAGACCGCAGTTACAGCTCGGCCACAT
GGAAGTCCGAGTGCATGAAGAACCCGGTGAAGCTGAAGATCAAATTACTT
ATCTTTATAAGTATAGCGCCATTCTCTCACTGCACTTATAAGCAGGAAGT
ACTAAGAGACATGGCATAGTTTTCGCCTAGGACGAAGCGATCAAAGCTTT
GGAACAATGTGCGTTCCTTTCCTCTACGGGAGAATCAAGAATCTAAGGAC
AATTTCTGACTGAACACGACGATACAGATGCGCTGCAATGAACGGAATCA
GCCAGACTATCGTCGATCGAGCAAACGAAATTGCCGCACTATCTGCCCGT
GGTGAAAATCTGATTGCCGCTTGCGCTGTGCTTTCGGCTCAAGAGACGCA
GGCTCTGGAAGATGCAGTAGGATATATGCTATCTGTTTGCTTCTGGTCCT
CTGTTGAGATTGCTAACGGGGTCTTGCTTGAAGGACAGATTAGCAAGAGA
GTTCCTGTCGTTGGATCTGTCAGAGGCTTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2493837..2495219- >CAN33_46150-T1 ID=CAN33_46150-T1|Name=CAN33_46150-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7968bp|location=Sequence derived from alignment at NKJJ01000022.1:2493837..2495219- (Aspergillus niger FDAARGOS_311)
ATGCGCTGCAATGAACGGAATCAGCCAGACTATCGTCGATCGAGCAAACG
AAATTGCCGCACTATCTGCCCGTGGTGAAAATCTGATTGCCGCTTGCGCT
GTGCTTTCGGCTCAAGAGACGCAGGCTCTGGAAGATGCAGTAGGATATAT
GCTATCTGTTTGCTTCTGGTCCTCTGTTGAGATTGCTAACGGGGTCTTGC
TTGAAGGACAGATTAGCAAGAGAGTTCCTGTCGTTGGATCTGTCAGAGGC
TTGTGATTTTCGCCTAGGACGAAGCGATCAAAGCTTTGGAACAATATGGA
ATCGGACTGGCATGCGGAGTCCTCGAGAACCTACTAAACCGTGAAGATGC
TCCCAAAGTCATAGCGGCAACGCATTTTCATGAGATTCTCGCAAACGGAT
ACCTCAAACCCAGACCGCAGTTACAGCTCGGCCACATGGAAGTCCGAGTG
CATGAAGAACCCGGTGAAGCTGAAGATCAAATTACTTATCTTTATAAATA
CAAAGTACCTTCATGAACGATCTGCAGCAGCTATCATTTGACCTGAAGCA
GGTAACCGGCCATAGTCTGCTGTTGATAGATGAGTTCGGTAAAGGCACCA
ATGAGTATGCTTTGTCCCAGCTGAAAGCGCAGAACTTGGGATCATCGACA
AAATCTTGGTCAAGTCAAACACTCAAGATAGCGTCTCCCAAGTAGCTCTC
ATCATCTATCTAGCGCAGGTGGGAAGACATATCCTACAAGAGCTGACAGT
CTCGTCTTATGTGCCCAATGATACCTATCTAATTGGCAGAAGAACACAGA
GAGAGTCGGTGGAACCAATCTGCACAACACTCAAGCCATACGAGAATGAC
TGTGAACCAAGCATGCTACTACTTACAGGACCGAATTACTCTGGGAAGAG
CGTTTACATGAAGCAGATGGCTCATGCAGCTAGCTCCTACAAGTTGGTGC
GACCTAAGATGGTGCAAGAAGATGTTATCAAGATCAAGGGTGGCAGATGC
GCTGCAATGAACGGAATCAGCCAGACTATCGTCGATCGAGCAAACGAAAT
TGCCGCACTATCTGCCCGTGGTGAAAATCTGATTGCCGCTTGCGCTGTGC
TTTCGGCTCAAGAGACGCAGGCTCTGGAAGATGCAGTAGGATATATGCTA
TCTGTTTGCTTCTGGTCCTCTGTTGAGATTGCTAACGGGGTCTTGCTTGA
AGGACAGATTAGCAAGAGAGTTCCTGTCGTTGGATCTGTCAGAGGCTTGT
GATTTTCGCCTAGGACGAAGCGATCAAAGCTTTGGAACAATATGGAATCG
GACTGGCATGCGGAGTCCTCGAGAACCTACTAAACCGTGAAGATGCTCCC
AAAGTCATAGCGGCAACGCATTTTCATGAGATTCTCGCAAACGGATACCT
CAAACCCAGACCGCAGTTACAGCTCGGCCACATGGAAGTCCGAGTGCATG
AAGAACCCGGTGAAGCTGAAGATCAAATTACTTATCTTTATAAATACAAA
GTACCTTCATGAACGATCTGCAGCAGCTATCATTTGACCTGAAGCAGGTA
ACCGGCCATAGTCTGCTGTTGATAGATGAGTTCGGTAAAGGCACCAATGA
GTATGCTTTGTCCCAGCTGAAAGCGCAGAACTTGGGATCATCGACAAAAT
CTTGGTCAAGTCAAACACTCAAGATAGCGTCTCCCAAGTAGCTCTCATCA
TCTATCTAGCGCAGGTGGGAAGACATATCCTACAAGAGCTGACAGTCTCG
TCTTATGTGCCCAATGATACCTATCTAATTGGCAGAAGAACACAGAGAGA
GTCGGTGGAACCAATCTGCACAACACTCAAGCCATACGAGAATGACTGTG
AACCAAGCATGCTACTACTTACAGGACCGAATTACTCTGGGAAGAGCGTT
TACATGAAGCAGATGGCTCATGCAGCTAGCTCCTACAAGTTGGTGCGACC
TAAGATGGTGCAAGAAGATGTTATCAAGATCAAGGGTGGCAGATGCGCTG
CAATGAACGGAATCAGCCAGACTATCGTCGATCGAGCAAACGAAATTGCC
GCACTATCTGCCCGTGGTGAAAATCTGATTGCCGCTTGCGCTGTGCTTTC
GGCTCAAGAGACGCAGGCTCTGGAAGATGCAGTAGGATATATGCTATCTG
TTTGCTTCTGGTCCTCTGTTGAGATTGCTAACGGGGTCTTGCTTGAAGGA
CAGATTAGCAAGAGAGTTCCTGTCGTTGGATCTGTCAGAGGCTTGTGATT
TTCGCCTAGGACGAAGCGATCAAAGCTTTGGAACAATATGGAATCGGACT
GGCATGCGGAGTCCTCGAGAACCTACTAAACCGTGAAGATGCTCCCAAAG
TCATAGCGGCAACGCATTTTCATGAGATTCTCGCAAACGGATACCTCAAA
CCCAGACCGCAGTTACAGCTCGGCCACATGGAAGTCCGAGTGCATGAAGA
ACCCGGTGAAGCTGAAGATCAAATTACTTATCTTTATAAATACAAAGTAC
CTTCATGAACGATCTGCAGCAGCTATCATTTGACCTGAAGCAGGTAACCG
GCCATAGTCTGCTGTTGATAGATGAGTTCGGTAAAGGCACCAATGAGTAT
GCTTTGTCCCAGCTGAAAGCGCAGAACTTGGGATCATCGACAAAATCTTG
GTCAAGTCAAACACTCAAGATAGCGTCTCCCAAGTAGCTCTCATCATCTA
TCTAGCGCAGGTGGGAAGACATATCCTACAAGAGCTGACAGTCTCGTCTT
ATGTGCCCAATGATACCTATCTAATTGGCAGAAGAACACAGAGAGAGTCG
GTGGAACCAATCTGCACAACACTCAAGCCATACGAGAATGACTGTGAACC
AAGCATGCTACTACTTACAGGACCGAATTACTCTGGGAAGAGCGTTTACA
TGAAGCAGATGGCTCATGCAGCTAGCTCCTACAAGTTGGTGCGACCTAAG
ATGGTGCAAGAAGATGTTATCAAGATCAAGGGTGGCAGATGCGCTGCAAT
GAACGGAATCAGCCAGACTATCGTCGATCGAGCAAACGAAATTGCCGCAC
TATCTGCCCGTGGTGAAAATCTGATTGCCGCTTGCGCTGTGCTTTCGGCT
CAAGAGACGCAGGCTCTGGAAGATGCAGTAGGATATATGCTATCTGTTTG
CTTCTGGTCCTCTGTTGAGATTGCTAACGGGGTCTTGCTTGAAGGACAGA
TTAGCAAGAGAGTTCCTGTCGTTGGATCTGTCAGAGGCTTGTGATTTTCG
CCTAGGACGAAGCGATCAAAGCTTTGGAACAATATGGAATCGGACTGGCA
TGCGGAGTCCTCGAGAACCTACTAAACCGTGAAGATGCTCCCAAAGTCAT
AGCGGCAACGCATTTTCATGAGATTCTCGCAAACGGATACCTCAAACCCA
GACCGCAGTTACAGCTCGGCCACATGGAAGTCCGAGTGCATGAAGAACCC
GGTGAAGCTGAAGATCAAATTACTTATCTTTATAAATACAAAGTACCTTC
ATGAACGATCTGCAGCAGCTATCATTTGACCTGAAGCAGGTAACCGGCCA
TAGTCTGCTGTTGATAGATGAGTTCGGTAAAGGCACCAATGAGTATGCTT
TGTCCCAGCTGAAAGCGCAGAACTTGGGATCATCGACAAAATCTTGGTCA
AGTCAAACACTCAAGATAGCGTCTCCCAAGTAGCTCTCATCATCTATCTA
GCGCAGGTGGGAAGACATATCCTACAAGAGCTGACAGTCTCGTCTTATGT
GCCCAATGATACCTATCTAATTGGCAGAAGAACACAGAGAGAGTCGGTGG
AACCAATCTGCACAACACTCAAGCCATACGAGAATGACTGTGAACCAAGC
ATGCTACTACTTACAGGACCGAATTACTCTGGGAAGAGCGTTTACATGAA
GCAGATGGCTCATGCAGCTAGCTCCTACAAGTTGGTGCGACCTAAGATGG
TGCAAGAAGATGTTATCAAGATCAAGGGTGGCAGATGCGCTGCAATGAAC
GGAATCAGCCAGACTATCGTCGATCGAGCAAACGAAATTGCCGCACTATC
TGCCCGTGGTGAAAATCTGATTGCCGCTTGCGCTGTGCTTTCGGCTCAAG
AGACGCAGGCTCTGGAAGATGCAGTAGGATATATGCTATCTGTTTGCTTC
TGGTCCTCTGTTGAGATTGCTAACGGGGTCTTGCTTGAAGGACAGATTAG
CAAGAGAGTTCCTGTCGTTGGATCTGTCAGAGGCTTGTGATTTTCGCCTA
GGACGAAGCGATCAAAGCTTTGGAACAATATGGAATCGGACTGGCATGCG
GAGTCCTCGAGAACCTACTAAACCGTGAAGATGCTCCCAAAGTCATAGCG
GCAACGCATTTTCATGAGATTCTCGCAAACGGATACCTCAAACCCAGACC
GCAGTTACAGCTCGGCCACATGGAAGTCCGAGTGCATGAAGAACCCGGTG
AAGCTGAAGATCAAATTACTTATCTTTATAAATACAAAGTACCTTCATGA
ACGATCTGCAGCAGCTATCATTTGACCTGAAGCAGGTAACCGGCCATAGT
CTGCTGTTGATAGATGAGTTCGGTAAAGGCACCAATGAGTATGCTTTGTC
CCAGCTGAAAGCGCAGAACTTGGGATCATCGACAAAATCTTGGTCAAGTC
AAACACTCAAGATAGCGTCTCCCAAGTAGCTCTCATCATCTATCTAGCGC
AGGTGGGAAGACATATCCTACAAGAGCTGACAGTCTCGTCTTATGTGCCC
AATGATACCTATCTAATTGGCAGAAGAACACAGAGAGAGTCGGTGGAACC
AATCTGCACAACACTCAAGCCATACGAGAATGACTGTGAACCAAGCATGC
TACTACTTACAGGACCGAATTACTCTGGGAAGAGCGTTTACATGAAGCAG
ATGGCTCATGCAGCTAGCTCCTACAAGTTGGTGCGACCTAAGATGGTGCA
AGAAGATGTTATCAAGATCAAGGGTGGCAGATGCGCTGCAATGAACGGAA
TCAGCCAGACTATCGTCGATCGAGCAAACGAAATTGCCGCACTATCTGCC
CGTGGTGAAAATCTGATTGCCGCTTGCGCTGTGCTTTCGGCTCAAGAGAC
GCAGGCTCTGGAAGATGCAGTAGGATATATGCTATCTGTTTGCTTCTGGT
CCTCTGTTGAGATTGCTAACGGGGTCTTGCTTGAAGGACAGATTAGCAAG
AGAGTTCCTGTCGTTGGATCTGTCAGAGGCTTGTGATTTTCGCCTAGGAC
GAAGCGATCAAAGCTTTGGAACAATATGGAATCGGACTGGCATGCGGAGT
CCTCGAGAACCTACTAAACCGTGAAGATGCTCCCAAAGTCATAGCGGCAA
CGCATTTTCATGAGATTCTCGCAAACGGATACCTCAAACCCAGACCGCAG
TTACAGCTCGGCCACATGGAAGTCCGAGTGCATGAAGAACCCGGTGAAGC
TGAAGATCAAATTACTTATCTTTATAAATACAAAGTACCTTCATGAACGA
TCTGCAGCAGCTATCATTTGACCTGAAGCAGGTAACCGGCCATAGTCTGC
TGTTGATAGATGAGTTCGGTAAAGGCACCAATGAGTATGCTTTGTCCCAG
CTGAAAGCGCAGAACTTGGGATCATCGACAAAATCTTGGTCAAGTCAAAC
ACTCAAGATAGCGTCTCCCAAGTAGCTCTCATCATCTATCTAGCGCAGGT
GGGAAGACATATCCTACAAGAGCTGACAGTCTCGTCTTATGTGCCCAATG
ATACCTATCTAATTGGCAGAAGAACACAGAGAGAGTCGGTGGAACCAATC
TGCACAACACTCAAGCCATACGAGAATGACTGTGAACCAAGCATGCTACT
ACTTACAGGACCGAATTACTCTGGGAAGAGCGTTTACATGAAGCAGATGG
CTCATGCAGCTAGCTCCTACAAGTTGGTGCGACCTAAGATGGTGCAAGAA
GATGTTATCAAGATCAAGGGTGGCAGATGCGCTGCAATGAACGGAATCAG
CCAGACTATCGTCGATCGAGCAAACGAAATTGCCGCACTATCTGCCCGTG
GTGAAAATCTGATTGCCGCTTGCGCTGTGCTTTCGGCTCAAGAGACGCAG
GCTCTGGAAGATGCAGTAGGATATATGCTATCTGTTTGCTTCTGGTCCTC
TGTTGAGATTGCTAACGGGGTCTTGCTTGAAGGACAGATTAGCAAGAGAG
TTCCTGTCGTTGGATCTGTCAGAGGCTTGTGATTTTCGCCTAGGACGAAG
CGATCAAAGCTTTGGAACAATATGGAATCGGACTGGCATGCGGAGTCCTC
GAGAACCTACTAAACCGTGAAGATGCTCCCAAAGTCATAGCGGCAACGCA
TTTTCATGAGATTCTCGCAAACGGATACCTCAAACCCAGACCGCAGTTAC
AGCTCGGCCACATGGAAGTCCGAGTGCATGAAGAACCCGGTGAAGCTGAA
GATCAAATTACTTATCTTTATAAATACAAAGTACCTTCATGAACGATCTG
CAGCAGCTATCATTTGACCTGAAGCAGGTAACCGGCCATAGTCTGCTGTT
GATAGATGAGTTCGGTAAAGGCACCAATGAGTATGCTTTGTCCCAGCTGA
AAGCGCAGAACTTGGGATCATCGACAAAATCTTGGTCAAGTCAAACACTC
AAGATAGCGTCTCCCAAGTAGCTCTCATCATCTATCTAGCGCAGGTGGGA
AGACATATCCTACAAGAGCTGACAGTCTCGTCTTATGTGCCCAATGATAC
CTATCTAATTGGCAGAAGAACACAGAGAGAGTCGGTGGAACCAATCTGCA
CAACACTCAAGCCATACGAGAATGACTGTGAACCAAGCATGCTACTACTT
ACAGGACCGAATTACTCTGGGAAGAGCGTTTACATGAAGCAGATGGCTCA
TGCAGCTAGCTCCTACAAGTTGGTGCGACCTAAGATGGTGCAAGAAGATG
TTATCAAGATCAAGGGTGGCAGATGCGCTGCAATGAACGGAATCAGCCAG
ACTATCGTCGATCGAGCAAACGAAATTGCCGCACTATCTGCCCGTGGTGA
AAATCTGATTGCCGCTTGCGCTGTGCTTTCGGCTCAAGAGACGCAGGCTC
TGGAAGATGCAGTAGGATATATGCTATCTGTTTGCTTCTGGTCCTCTGTT
GAGATTGCTAACGGGGTCTTGCTTGAAGGACAGATTAGCAAGAGAGTTCC
TGTCGTTGGATCTGTCAGAGGCTTGTGATTTTCGCCTAGGACGAAGCGAT
CAAAGCTTTGGAACAATATGGAATCGGACTGGCATGCGGAGTCCTCGAGA
ACCTACTAAACCGTGAAGATGCTCCCAAAGTCATAGCGGCAACGCATTTT
CATGAGATTCTCGCAAACGGATACCTCAAACCCAGACCGCAGTTACAGCT
CGGCCACATGGAAGTCCGAGTGCATGAAGAACCCGGTGAAGCTGAAGATC
AAATTACTTATCTTTATAAATACAAAGTACCTTCATGAACGATCTGCAGC
AGCTATCATTTGACCTGAAGCAGGTAACCGGCCATAGTCTGCTGTTGATA
GATGAGTTCGGTAAAGGCACCAATGAGTATGCTTTGTCCCAGCTGAAAGC
GCAGAACTTGGGATCATCGACAAAATCTTGGTCAAGTCAAACACTCAAGA
TAGCGTCTCCCAAGTAGCTCTCATCATCTATCTAGCGCAGGTGGGAAGAC
ATATCCTACAAGAGCTGACAGTCTCGTCTTATGTGCCCAATGATACCTAT
CTAATTGGCAGAAGAACACAGAGAGAGTCGGTGGAACCAATCTGCACAAC
ACTCAAGCCATACGAGAATGACTGTGAACCAAGCATGCTACTACTTACAG
GACCGAATTACTCTGGGAAGAGCGTTTACATGAAGCAGATGGCTCATGCA
GCTAGCTCCTACAAGTTGGTGCGACCTAAGATGGTGCAAGAAGATGTTAT
CAAGATCAAGGGTGGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030983 | mismatched DNA binding |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006298 | mismatch repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR000432 |
| DBxref | PFAM:PF00488 |
| Product | MutS domain V family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2493837..2495219 - |
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