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CAN33_46270-T1, CAN33_46270-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46270-T1
Unique NameCAN33_46270-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2568920..2569813+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46270-T1 ID=CAN33_46270-T1|Name=CAN33_46270-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=894bp|location=Sequence derived from alignment at NKJJ01000022.1:2568920..2569813+ (Aspergillus niger FDAARGOS_311)
ATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCAAGGA
GATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACCATCC
TGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGATTGGT
CAGTCCTCCTCTTCCTCCTCCCTCTCCTCGGTCCAGACACAGCAGAACTT
GGCATCGATCAGTTGTTGGGCTTGGCTCAATACCGGAACGGAATGATATC
GAACATGGAACGCAAATCAATTCACGATGAGAGAACACAAAACTGACTGG
TGTTGTTCTGTGCTGTGCAGGTTTCAACGTCGAGACCGTCGAATACAAGA
ACATTCAGTTCACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCT
CTCTGGAGACACTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGA
CAGCAATGACCGTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCA
TGTTGAACGAGGATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAAC
AAGCAAGATTTGCCGGTATGCTTGAAATCCACTTCTTGTGCAACAATGTG
GGGGCCGAAACAATGGATATTGACCGTGTGATTTCTTTTTCTTCTAGAAC
GCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCAC
CCGCCGTCCCTGGGTAAGTTATACCCCCTCGCATGTCGACACCTGAGGTG
TCTATTCCCGAGGATCGAACCCCAACTAACGCGCTTGCTTCCCTTTTCTA
GTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGAGGGTC
TGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2568920..2569813+

>CAN33_46270-T1 ID=CAN33_46270-T1|Name=CAN33_46270-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2208bp|location=Sequence derived from alignment at NKJJ01000022.1:2568920..2569813+ (Aspergillus niger FDAARGOS_311)
ATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCAAGGA
GATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACCATCC
TGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGATTGGT
TTCAACGTCGAGACCGTCGAATACAAGAACATTCAGTTCACCGTCTGGGA
CGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGACACTACTTCCAGA
ACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGACCGTGACCGTATC
GTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACGAGGATGAACTCCG
TGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGATTTGCCGAACGCCA
TGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCACCCGC
CGTCCCTGGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTA
CGAGGGTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACT
AAATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCAAG
GAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACCAT
CCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGATTG
GTTTCAACGTCGAGACCGTCGAATACAAGAACATTCAGTTCACCGTCTGG
GACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGACACTACTTCCA
GAACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGACCGTGACCGTA
TCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACGAGGATGAACTC
CGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGATTTGCCGAACGC
CATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCACCC
GCCGTCCCTGGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTG
TACGAGGGTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGA
CTAAATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCA
AGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACC
ATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGAT
TGGTTTCAACGTCGAGACCGTCGAATACAAGAACATTCAGTTCACCGTCT
GGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGACACTACTTC
CAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGACCGTGACCG
TATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACGAGGATGAAC
TCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGATTTGCCGAAC
GCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCAC
CCGCCGTCCCTGGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTC
TGTACGAGGGTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGC
GACTAAATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCG
CAAGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCA
CCATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACG
ATTGGTTTCAACGTCGAGACCGTCGAATACAAGAACATTCAGTTCACCGT
CTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGACACTACT
TCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGACCGTGAC
CGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACGAGGATGA
ACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGATTTGCCGA
ACGCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTC
ACCCGCCGTCCCTGGTACATCCAATCCACCTGCGCCACGACTGGTGACGG
TCTGTACGAGGGTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACC
GCGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46270CAN33_46270Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46270-T1.exon1CAN33_46270-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_46270-T1.exon2CAN33_46270-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46270-T1.exon3CAN33_46270-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46270-T1.exon4CAN33_46270-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46270-T1.cdsCAN33_46270-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46270-T1CAN33_46270-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264RJ7
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
ProductADP-ribosylation factor family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2568920..2569813 +
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