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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:2757832..2758370- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_46560-T1 ID=CAN33_46560-T1|Name=CAN33_46560-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=539bp|location=Sequence derived from alignment at NKJJ01000022.1:2757832..2758370- (Aspergillus niger FDAARGOS_311)
ATGTTGTACGAACTGATCGCTGTTGTATGTTTCCTGGCGATTCTGTTGGA
TGACTTTAACTATGTGCTTTGGATTGATGCTAATTGACGAGTGCAGGTCC
GTCCCGGTAGCCTCCAGGAGGTTAGAGAGTACGTGCCTGCCGACCCTATC
TGACCACCTCATATCCTTACGCAACATCCTACTATCGCCAAACCATCATT
ATCCACGAATTTTCACTGACAGACGACAGTATCGCCCGCAATGCCGGCAT
CCAGGTTCTCCGCTCCGGCGGCGTAGTCCGCGGATTCACCAACTGGGGTA
CCTTCCGTCTGCCCAGGCCCACGACGAAGCATCAGGCCCGCTACAGGGAA
GGCCACCACTTCATCATGCGCTTCGATGCCTCCGGTCCCGTGCAAGCGGC
TGTCCGCAGAACTCTTGGTCTCGATCCCCGGATGGTTCGGTTCTCCGTTG
TCAAGTTGGGCGACAAGCTGGAGGAAATCAAGCACGTCGATGGCAAGGTT
GAGTGGAACAACAACCGTAGCATCTCCGAAACGTTTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:2757832..2758370- >CAN33_46560-T1 ID=CAN33_46560-T1|Name=CAN33_46560-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1098bp|location=Sequence derived from alignment at NKJJ01000022.1:2757832..2758370- (Aspergillus niger FDAARGOS_311)
TATCGCCCGCAATGCCGGCATCCAGGTTCTCCGCTCCGGCGGCGTAGTCC
GCGGATTCACCAACTGGGGTACCTTCCGTCTGCCCAGGCCCACGACGAAG
CATCAGGCCCGCTACAGGGAAGGCCACCACTTCATCATGCGCTTCGATGC
CTCCGGTCCCGTGCAAGCGGCTGTCCGCAGAACTCTTGGTCTCGATCCCC
GGATGGTTCGGTTCTCCGTTGTCAAGTTGGGCGACAAGCTGGAGGAAATC
AAGCACGTCGATGGCAAGGTTGAGTGGAACAACAACCGTAGCATCTCCGA
AACGTTTTAAGTCCGTCCCGGTAGCCTCCAGGAGGTTAGAGAATGTTGTA
CGAACTGATCGCTGTTTATCGCCCGCAATGCCGGCATCCAGGTTCTCCGC
TCCGGCGGCGTAGTCCGCGGATTCACCAACTGGGGTACCTTCCGTCTGCC
CAGGCCCACGACGAAGCATCAGGCCCGCTACAGGGAAGGCCACCACTTCA
TCATGCGCTTCGATGCCTCCGGTCCCGTGCAAGCGGCTGTCCGCAGAACT
CTTGGTCTCGATCCCCGGATGGTTCGGTTCTCCGTTGTCAAGTTGGGCGA
CAAGCTGGAGGAAATCAAGCACGTCGATGGCAAGGTTGAGTGGAACAACA
ACCGTAGCATCTCCGAAACGTTTTAAGTCCGTCCCGGTAGCCTCCAGGAG
GTTAGAGAATGTTGTACGAACTGATCGCTGTTTATCGCCCGCAATGCCGG
CATCCAGGTTCTCCGCTCCGGCGGCGTAGTCCGCGGATTCACCAACTGGG
GTACCTTCCGTCTGCCCAGGCCCACGACGAAGCATCAGGCCCGCTACAGG
GAAGGCCACCACTTCATCATGCGCTTCGATGCCTCCGGTCCCGTGCAAGC
GGCTGTCCGCAGAACTCTTGGTCTCGATCCCCGGATGGTTCGGTTCTCCG
TTGTCAAGTTGGGCGACAAGCTGGAGGAAATCAAGCACGTCGATGGCAAG
GTTGAGTGGAACAACAACCGTAGCATCTCCGAAACGTTTTAAGTCCGTCC
CGGTAGCCTCCAGGAGGTTAGAGAATGTTGTACGAACTGATCGCTGTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
| GO:0019843 | rRNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035980 |
| DBxref | InterPro:IPR000529 |
| DBxref | InterPro:IPR014717 |
| DBxref | PFAM:PF01250 |
| Product | ribosomal protein S6 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:2757832..2758370 - |
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