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CAN33_46585-T1, CAN33_46585-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46585-T1
Unique NameCAN33_46585-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2766182..2767005-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46585-T1 ID=CAN33_46585-T1|Name=CAN33_46585-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=824bp|location=Sequence derived from alignment at NKJJ01000022.1:2766182..2767005- (Aspergillus niger FDAARGOS_311)
ATGAGCACCATCCCAAGCGTCCACATCAACGACAAAAGCCCCATAGAGGA
GCACCACCAACACGACTCCACCTCCACCTCCCCAACAACCCGCAAATCCC
TGCATCAGAACATCTTCGGCAAGCTACGACCCCTCCCCTTCCAATACCAC
TGGACTGTCTGGTACGACCGTCACACCGACGCCCCAGCAGCATCAAGCGC
AACCGCAACAGCAGACTACGACTCCCGTCTATACGTCCTGCACGAGGATG
TCGCCGATATCGCCACCTTCTACCGCGTGTACAACAACTACCCCTGGGAC
AAGATCCGCCTGCGCGACACCGTCCATATCTTTCGCAAAGGCGTGAGACC
CGTCTGGGAAGACCCCGAGAATCGGAATGGGGGGTGCTGGCGCTTCCGTG
TTCCGAAGAGTAAAGCCCAAGCTTTCTTTCATGAGATTGCTATTCTGTGT
ATGGCGAACGAGTTTCAGGCTGTTTTGGAGAAGGGTTAGTCATCTTTTCC
TTCTTTCATCTGTTCTGTTTTTCTATGGTCTAGTAGATACACAACGGGTA
AGTTTGGGACATACACTAACAAGACAATGGGGGAAATATAGAACACGACC
ACGTCCTCGGAGTCTCAACCTCCGTCCGCTTCAACTCGCACCTCATCTCC
GTCTGGAACAAGCTCGGCTCCAACGACCGGTCTATCAAGGCTCTCGAGAA
AACCATTATTGATCGATTATCCCCTGAACTACGGCCCACGGGGACGGGGT
CCACTGCCTACTTTTACAAGCGACATGATGAGAATGATGGGTTTAAGGAG
GCTGTGGAGAGGAGTAAGACATGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2766182..2767005-

>CAN33_46585-T1 ID=CAN33_46585-T1|Name=CAN33_46585-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1881bp|location=Sequence derived from alignment at NKJJ01000022.1:2766182..2767005- (Aspergillus niger FDAARGOS_311)
AACACGACCACGTCCTCGGAGTCTCAACCTCCGTCCGCTTCAACTCGCAC
CTCATCTCCGTCTGGAACAAGCTCGGCTCCAACGACCGGTCTATCAAGGC
TCTCGAGAAAACCATTATTGATCGATTATCCCCTGAACTACGGCCCACGG
GGACGGGGTCCACTGCCTACTTTTACAAGCGACATGATGAGAATGATGGG
TTTAAGGAGGCTGTGGAGAGGAGTAAGACATGAAACATCTTCGGCAAGCT
ACGACCCCTCCCCTTCCAATACCACTGGACTGTCTGGTACGACCGTCACA
CCGACGCCCCAGCAGCATCAAGCGCAACCGCAACAGCAGACTACGACTCC
CGTCTATACGTCCTGCACGAGGATGTCGCCGATATCGCCACCTTCTACCG
CGTGTACAACAACTACCCCTGGGACAAGATCCGCCTGCGCGACACCGTCC
ATATCTTTCGCAAAGGCGTGAGACCCGTCTGGGAAGACCCCGAGAATCGG
AATGGGGGGTGCTGGCGCTTCCGTGTTCCGAAGAGTAAAGCCCAAGCTTT
CTTTCATGAGATTGCTATTCTGTGTATGGCGAACGAGTTTCAGGCTGTTT
TGGAGAAGGATGAGCACCATCCCAAGCAACACGACCACGTCCTCGGAGTC
TCAACCTCCGTCCGCTTCAACTCGCACCTCATCTCCGTCTGGAACAAGCT
CGGCTCCAACGACCGGTCTATCAAGGCTCTCGAGAAAACCATTATTGATC
GATTATCCCCTGAACTACGGCCCACGGGGACGGGGTCCACTGCCTACTTT
TACAAGCGACATGATGAGAATGATGGGTTTAAGGAGGCTGTGGAGAGGAG
TAAGACATGAAACATCTTCGGCAAGCTACGACCCCTCCCCTTCCAATACC
ACTGGACTGTCTGGTACGACCGTCACACCGACGCCCCAGCAGCATCAAGC
GCAACCGCAACAGCAGACTACGACTCCCGTCTATACGTCCTGCACGAGGA
TGTCGCCGATATCGCCACCTTCTACCGCGTGTACAACAACTACCCCTGGG
ACAAGATCCGCCTGCGCGACACCGTCCATATCTTTCGCAAAGGCGTGAGA
CCCGTCTGGGAAGACCCCGAGAATCGGAATGGGGGGTGCTGGCGCTTCCG
TGTTCCGAAGAGTAAAGCCCAAGCTTTCTTTCATGAGATTGCTATTCTGT
GTATGGCGAACGAGTTTCAGGCTGTTTTGGAGAAGGATGAGCACCATCCC
AAGCAACACGACCACGTCCTCGGAGTCTCAACCTCCGTCCGCTTCAACTC
GCACCTCATCTCCGTCTGGAACAAGCTCGGCTCCAACGACCGGTCTATCA
AGGCTCTCGAGAAAACCATTATTGATCGATTATCCCCTGAACTACGGCCC
ACGGGGACGGGGTCCACTGCCTACTTTTACAAGCGACATGATGAGAATGA
TGGGTTTAAGGAGGCTGTGGAGAGGAGTAAGACATGAAACATCTTCGGCA
AGCTACGACCCCTCCCCTTCCAATACCACTGGACTGTCTGGTACGACCGT
CACACCGACGCCCCAGCAGCATCAAGCGCAACCGCAACAGCAGACTACGA
CTCCCGTCTATACGTCCTGCACGAGGATGTCGCCGATATCGCCACCTTCT
ACCGCGTGTACAACAACTACCCCTGGGACAAGATCCGCCTGCGCGACACC
GTCCATATCTTTCGCAAAGGCGTGAGACCCGTCTGGGAAGACCCCGAGAA
TCGGAATGGGGGGTGCTGGCGCTTCCGTGTTCCGAAGAGTAAAGCCCAAG
CTTTCTTTCATGAGATTGCTATTCTGTGTATGGCGAACGAGTTTCAGGCT
GTTTTGGAGAAGGATGAGCACCATCCCAAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46585CAN33_46585Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46585-T1CAN33_46585-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46585-T1.cdsCAN33_46585-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46585-T1.exon3CAN33_46585-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46585-T1.exon2CAN33_46585-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46585-T1.exon1CAN33_46585-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR023398
DBxrefInterPro:IPR001040
DBxrefPFAM:PF01652
ProductEukaryotic initiation factor 4E family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2766182..2767005 -
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