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CAN33_46710-T1, CAN33_46710-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46710-T1
Unique NameCAN33_46710-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2828685..2829777-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46710-T1 ID=CAN33_46710-T1|Name=CAN33_46710-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1093bp|location=Sequence derived from alignment at NKJJ01000022.1:2828685..2829777- (Aspergillus niger FDAARGOS_311)
ATGCCCGACTTGACAGGAAAGGTAACCATTGTCACTGGTGCAACGTCCGG
AGTCGGTTTCAACACAGCATCCATCCTATACTCCAAAAATGCCACCGTAT
ACATCGCAGCCCGGTCCGCCGACAAGGCCCGCACGGCCATCAACGAGATT
CAGACCTCCGCGGAGGGCGCACATAGCCGAGGTCGCCTCTCCTTCCTGCA
ACTAGATTTGTCCAACCTAGCCAGCATCAAAGAAAGCGCCAATAAATTTC
TGGAGTTGGAAGACCGTCTTGATATATTGATTCATAATGCGGGAGTCATG
ACTCCTCCGGCGGGGAGTAAGACGATAACTGTATTACTCCCGACAATAGC
TAGTGATAAATGGAACACAAACGCTGATATTCGAGATAGGGGCACGATCT
TGAAATGGGAACAAACTGCCTCGGGCCCTTCCTCTTCAACAAATTCCTTC
TTCCGCTTATTCAACGCACCGCGGCCGCAGCTCCCGCGAGTAGCGTGCGC
GTGGTGTGGTTGTCGTCCATGATATCATCGTTCACTGCGAATGGGGGGAT
CATCTTCGATGAAGAGACTGGTGCTCCTAAGGTCCTCTCTGACCCGATGC
AGAATTATATGGAGAGTAAAGTGGGCAATGTGTTCATCGCTAAGGAGATG
GCGAATCGGTATGGTGGGGAAGGCATACTTAGTTTGGTTCGTTTGATCCT
CAAATATCATTTTAGAGTGGATGAGTCAAACTAACTGGTAACAGAGTGTA
CATCCTGGCCTTATGAAGACTGAGCTACAGAGACATAGTTCTGCCATTCA
GGCTACGGTTATGGTATGCTTTCCCTTTCCAACGAGCAATGGAACTCCTA
GCTGACGATAGGCAGGGCTGGATATTCAAGGGTCCGCGGTACGGAGCGTA
CAGTGAGCTCTTTGCAGCGCTGTCTCCGGAAGTGACGCAAGAGAAGAACG
GAGCGTATATAATTCCCTGGGGGAGGTTCGGGTCTATCCCTTGTCATCTT
CAGAAGGGGTTGGTGTCGAAGCGTGATGGAGGGGCGGGAACGGCGGAGAG
GTTCTGGGGGTGGTGTGAGAAGGAAACTGCTCCGTATCTCTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2828685..2829777-

>CAN33_46710-T1 ID=CAN33_46710-T1|Name=CAN33_46710-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3696bp|location=Sequence derived from alignment at NKJJ01000022.1:2828685..2829777- (Aspergillus niger FDAARGOS_311)
GGCTGGATATTCAAGGGTCCGCGGTACGGAGCGTACAGTGAGCTCTTTGC
AGCGCTGTCTCCGGAAGTGACGCAAGAGAAGAACGGAGCGTATATAATTC
CCTGGGGGAGGTTCGGGTCTATCCCTTGTCATCTTCAGAAGGGGTTGGTG
TCGAAGCGTGATGGAGGGGCGGGAACGGCGGAGAGGTTCTGGGGGTGGTG
TGAGAAGGAAACTGCTCCGTATCTCTGAAGTGTACATCCTGGCCTTATGA
AGACTGAGCTACAGAGACATAGTTCTGCCATTCAGGCTACGGTTATGGGG
CACGATCTTGAAATGGGAACAAACTGCCTCGGGCCCTTCCTCTTCAACAA
ATTCCTTCTTCCGCTTATTCAACGCACCGCGGCCGCAGCTCCCGCGAGTA
GCGTGCGCGTGGTGTGGTTGTCGTCCATGATATCATCGTTCACTGCGAAT
GGGGGGATCATCTTCGATGAAGAGACTGGTGCTCCTAAGGTCCTCTCTGA
CCCGATGCAGAATTATATGGAGAGTAAAGTGGGCAATGTGTTCATCGCTA
AGGAGATGGCGAATCGGTATGGTGGGGAAGGCATACTTAGTTTGATGCCC
GACTTGACAGGAAAGGTAACCATTGTCACTGGTGCAACGTCCGGAGTCGG
TTTCAACACAGCATCCATCCTATACTCCAAAAATGCCACCGTATACATCG
CAGCCCGGTCCGCCGACAAGGCCCGCACGGCCATCAACGAGATTCAGACC
TCCGCGGAGGGCGCACATAGCCGAGGTCGCCTCTCCTTCCTGCAACTAGA
TTTGTCCAACCTAGCCAGCATCAAAGAAAGCGCCAATAAATTTCTGGAGT
TGGAAGACCGTCTTGATATATTGATTCATAATGCGGGAGTCATGACTCCT
CCGGCGGGGAGTAAGACGATAACTGGCTGGATATTCAAGGGTCCGCGGTA
CGGAGCGTACAGTGAGCTCTTTGCAGCGCTGTCTCCGGAAGTGACGCAAG
AGAAGAACGGAGCGTATATAATTCCCTGGGGGAGGTTCGGGTCTATCCCT
TGTCATCTTCAGAAGGGGTTGGTGTCGAAGCGTGATGGAGGGGCGGGAAC
GGCGGAGAGGTTCTGGGGGTGGTGTGAGAAGGAAACTGCTCCGTATCTCT
GAAGTGTACATCCTGGCCTTATGAAGACTGAGCTACAGAGACATAGTTCT
GCCATTCAGGCTACGGTTATGGGGCACGATCTTGAAATGGGAACAAACTG
CCTCGGGCCCTTCCTCTTCAACAAATTCCTTCTTCCGCTTATTCAACGCA
CCGCGGCCGCAGCTCCCGCGAGTAGCGTGCGCGTGGTGTGGTTGTCGTCC
ATGATATCATCGTTCACTGCGAATGGGGGGATCATCTTCGATGAAGAGAC
TGGTGCTCCTAAGGTCCTCTCTGACCCGATGCAGAATTATATGGAGAGTA
AAGTGGGCAATGTGTTCATCGCTAAGGAGATGGCGAATCGGTATGGTGGG
GAAGGCATACTTAGTTTGATGCCCGACTTGACAGGAAAGGTAACCATTGT
CACTGGTGCAACGTCCGGAGTCGGTTTCAACACAGCATCCATCCTATACT
CCAAAAATGCCACCGTATACATCGCAGCCCGGTCCGCCGACAAGGCCCGC
ACGGCCATCAACGAGATTCAGACCTCCGCGGAGGGCGCACATAGCCGAGG
TCGCCTCTCCTTCCTGCAACTAGATTTGTCCAACCTAGCCAGCATCAAAG
AAAGCGCCAATAAATTTCTGGAGTTGGAAGACCGTCTTGATATATTGATT
CATAATGCGGGAGTCATGACTCCTCCGGCGGGGAGTAAGACGATAACTGG
CTGGATATTCAAGGGTCCGCGGTACGGAGCGTACAGTGAGCTCTTTGCAG
CGCTGTCTCCGGAAGTGACGCAAGAGAAGAACGGAGCGTATATAATTCCC
TGGGGGAGGTTCGGGTCTATCCCTTGTCATCTTCAGAAGGGGTTGGTGTC
GAAGCGTGATGGAGGGGCGGGAACGGCGGAGAGGTTCTGGGGGTGGTGTG
AGAAGGAAACTGCTCCGTATCTCTGAAGTGTACATCCTGGCCTTATGAAG
ACTGAGCTACAGAGACATAGTTCTGCCATTCAGGCTACGGTTATGGGGCA
CGATCTTGAAATGGGAACAAACTGCCTCGGGCCCTTCCTCTTCAACAAAT
TCCTTCTTCCGCTTATTCAACGCACCGCGGCCGCAGCTCCCGCGAGTAGC
GTGCGCGTGGTGTGGTTGTCGTCCATGATATCATCGTTCACTGCGAATGG
GGGGATCATCTTCGATGAAGAGACTGGTGCTCCTAAGGTCCTCTCTGACC
CGATGCAGAATTATATGGAGAGTAAAGTGGGCAATGTGTTCATCGCTAAG
GAGATGGCGAATCGGTATGGTGGGGAAGGCATACTTAGTTTGATGCCCGA
CTTGACAGGAAAGGTAACCATTGTCACTGGTGCAACGTCCGGAGTCGGTT
TCAACACAGCATCCATCCTATACTCCAAAAATGCCACCGTATACATCGCA
GCCCGGTCCGCCGACAAGGCCCGCACGGCCATCAACGAGATTCAGACCTC
CGCGGAGGGCGCACATAGCCGAGGTCGCCTCTCCTTCCTGCAACTAGATT
TGTCCAACCTAGCCAGCATCAAAGAAAGCGCCAATAAATTTCTGGAGTTG
GAAGACCGTCTTGATATATTGATTCATAATGCGGGAGTCATGACTCCTCC
GGCGGGGAGTAAGACGATAACTGGCTGGATATTCAAGGGTCCGCGGTACG
GAGCGTACAGTGAGCTCTTTGCAGCGCTGTCTCCGGAAGTGACGCAAGAG
AAGAACGGAGCGTATATAATTCCCTGGGGGAGGTTCGGGTCTATCCCTTG
TCATCTTCAGAAGGGGTTGGTGTCGAAGCGTGATGGAGGGGCGGGAACGG
CGGAGAGGTTCTGGGGGTGGTGTGAGAAGGAAACTGCTCCGTATCTCTGA
AGTGTACATCCTGGCCTTATGAAGACTGAGCTACAGAGACATAGTTCTGC
CATTCAGGCTACGGTTATGGGGCACGATCTTGAAATGGGAACAAACTGCC
TCGGGCCCTTCCTCTTCAACAAATTCCTTCTTCCGCTTATTCAACGCACC
GCGGCCGCAGCTCCCGCGAGTAGCGTGCGCGTGGTGTGGTTGTCGTCCAT
GATATCATCGTTCACTGCGAATGGGGGGATCATCTTCGATGAAGAGACTG
GTGCTCCTAAGGTCCTCTCTGACCCGATGCAGAATTATATGGAGAGTAAA
GTGGGCAATGTGTTCATCGCTAAGGAGATGGCGAATCGGTATGGTGGGGA
AGGCATACTTAGTTTGATGCCCGACTTGACAGGAAAGGTAACCATTGTCA
CTGGTGCAACGTCCGGAGTCGGTTTCAACACAGCATCCATCCTATACTCC
AAAAATGCCACCGTATACATCGCAGCCCGGTCCGCCGACAAGGCCCGCAC
GGCCATCAACGAGATTCAGACCTCCGCGGAGGGCGCACATAGCCGAGGTC
GCCTCTCCTTCCTGCAACTAGATTTGTCCAACCTAGCCAGCATCAAAGAA
AGCGCCAATAAATTTCTGGAGTTGGAAGACCGTCTTGATATATTGATTCA
TAATGCGGGAGTCATGACTCCTCCGGCGGGGAGTAAGACGATAACT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46710CAN33_46710Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46710-T1CAN33_46710-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46710-T1.cdsCAN33_46710-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46710-T1.exon4CAN33_46710-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_46710-T1.exon3CAN33_46710-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46710-T1.exon2CAN33_46710-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46710-T1.exon1CAN33_46710-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2828685..2829777 -
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