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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:584054..584651- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4680-T1 ID=CAN33_4680-T1|Name=CAN33_4680-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=598bp|location=Sequence derived from alignment at NKJJ01000019.1:584054..584651- (Aspergillus niger FDAARGOS_311)
ATGGTATGTGTTAATGTTATTTCGATCTGAGAATACCCTCAATGGGCGGC
TAACAAGCAATCAGGTTTTCATTTTGGGCGTGAACTTCCCCGAGCGAAAC
CTCGTCAAGGCAAGCAACTCCGAACTTCCATTTTACCTTCAACGCCTGGT
CTGACTGAAATCAGAAATCGCTCGAGTCCTTCTTCGGCATCGGTAACTTG
ACCTCGACCCGTCTCCTTGCCCGCTTCCATATCCACCCAACATGCAAGGT
TGGCGACTTGGCGAACAAGCAGGTCCTCGACATCACGGCCGCCTTGTCCG
ACATGAAGATTGAGAACGATCTCCGCAGACAGTACCTCGATAACATCAAG
CGTTTGAAGGAGACAGGAACCTACCGTGGTCGGCGTCATGCGCTCGGCTT
GCCCGTTCGGGGACAGCGGACGAGGAGCCAGGTAGGTTTATTCCTATATC
CAGTTTCCCCCAATATGATACTAGGGAATGTTGAAGCACTTCGCTGGTGG
ACGTGGTCGTGGGGTATTGCACAAAAGAAGATTTATACTAACGTAATCAC
CAGATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAGAAGACTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:584054..584651- >CAN33_4680-T1 ID=CAN33_4680-T1|Name=CAN33_4680-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1416bp|location=Sequence derived from alignment at NKJJ01000019.1:584054..584651- (Aspergillus niger FDAARGOS_311)
ATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAGAAGACTGTGAAAATC
GCTCGAGTCCTTCTTCGGCATCGGTAACTTGACCTCGACCCGTCTCCTTG
CCCGCTTCCATATCCACCCAACATGCAAGGTTGGCGACTTGGCGAACAAG
CAGGTCCTCGACATCACGGCCGCCTTGTCCGACATGAAGATTGAGAACGA
TCTCCGCAGACAGTACCTCGATAACATCAAGCGTTTGAAGGAGACAGGAA
CCTACCGTGGTCGGCGTCATGCGCTCGGCTTGCCCGTTCGGGGACAGCGG
ACGAGGAGCCAGGTTTTCATTTTGGGCGTGAACTTCCCCGAGCGAAACCT
CATGATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAGAAGACTGTGAA
AATCGCTCGAGTCCTTCTTCGGCATCGGTAACTTGACCTCGACCCGTCTC
CTTGCCCGCTTCCATATCCACCCAACATGCAAGGTTGGCGACTTGGCGAA
CAAGCAGGTCCTCGACATCACGGCCGCCTTGTCCGACATGAAGATTGAGA
ACGATCTCCGCAGACAGTACCTCGATAACATCAAGCGTTTGAAGGAGACA
GGAACCTACCGTGGTCGGCGTCATGCGCTCGGCTTGCCCGTTCGGGGACA
GCGGACGAGGAGCCAGGTTTTCATTTTGGGCGTGAACTTCCCCGAGCGAA
ACCTCATGATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAGAAGACTG
TGAAAATCGCTCGAGTCCTTCTTCGGCATCGGTAACTTGACCTCGACCCG
TCTCCTTGCCCGCTTCCATATCCACCCAACATGCAAGGTTGGCGACTTGG
CGAACAAGCAGGTCCTCGACATCACGGCCGCCTTGTCCGACATGAAGATT
GAGAACGATCTCCGCAGACAGTACCTCGATAACATCAAGCGTTTGAAGGA
GACAGGAACCTACCGTGGTCGGCGTCATGCGCTCGGCTTGCCCGTTCGGG
GACAGCGGACGAGGAGCCAGGTTTTCATTTTGGGCGTGAACTTCCCCGAG
CGAAACCTCATGATCAAAACTGCTGTCAAGCTCAACCGTATGGAGAGAAG
ACTGTGAAAATCGCTCGAGTCCTTCTTCGGCATCGGTAACTTGACCTCGA
CCCGTCTCCTTGCCCGCTTCCATATCCACCCAACATGCAAGGTTGGCGAC
TTGGCGAACAAGCAGGTCCTCGACATCACGGCCGCCTTGTCCGACATGAA
GATTGAGAACGATCTCCGCAGACAGTACCTCGATAACATCAAGCGTTTGA
AGGAGACAGGAACCTACCGTGGTCGGCGTCATGCGCTCGGCTTGCCCGTT
CGGGGACAGCGGACGAGGAGCCAGGTTTTCATTTTGGGCGTGAACTTCCC
CGAGCGAAACCTCATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0003735 | structural constituent of ribosome |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010979 |
| DBxref | InterPro:IPR018269 |
| DBxref | InterPro:IPR001892 |
| DBxref | InterPro:IPR027437 |
| DBxref | PFAM:PF00416 |
| Product | Ribosomal protein S13/S18 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:584054..584651 - |
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