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CAN33_46855-T1, CAN33_46855-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_46855-T1
Unique NameCAN33_46855-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:2910285..2912410+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_46855-T1 ID=CAN33_46855-T1|Name=CAN33_46855-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2126bp|location=Sequence derived from alignment at NKJJ01000022.1:2910285..2912410+ (Aspergillus niger FDAARGOS_311)
ATGGATATGAACCATTTAATAGGGTCAGTGTTCTATGCCACTACTGGTCT
GAACCAGGGTTTGTGCGGCTAGGCGGGAGTTAACACCTGGCAGTCAGCGT
TTCAACCTGATCTCCAAGAGTGACATTCGGTATGTTCGATCTTTCCCTCC
CTTGGCTTTTGGCCTTGGCTACAGCTGCTTCGTCATCGCACCTGGCTCCC
CCCCGGATTATACTAATACTGACTTGACCTTGTCAGTTATGTTGGAACGT
TGCATGAGATCAATCCTGAAGCCTCCACCATAGCTCTGGAGAATGTTGTC
TCTTTCGGGACCGAGGGTCGTCGAGGCAATCCCGCTGAGGAGATTGCCCC
GTCGGCCAGCGTCTACGAATATATTGTCTTCCGAGGCAGTGACGTAAAAG
ACATTAGCGTAGCAGAGGACACGAAGGAGAACACTCCACCTGAACCTCCT
CAGGTGCCGGATGATCCCGCCATCTTAGGGGTAAGTTTATCAACTCACAA
CTTCATTCCAAACCTTGCCTGCCCTTTGAGTGCTTTGCGTCCACGGACTT
GTTCCGTATGGACACTCGATCAAATGATGAAATATTTCGGATGTAAACTC
ACAGACCTGTTCCGAATTGCGCAAACAATTCATGTGGATATTTTCCGTTG
CCTTCCTTCTGAATGATCGAGAAGCAAAGCACTCTTAATCTTGCCTTGTC
ACACATATTCTCTTTCTCAAGCCATGATACTAATTAAGTTTCATGAAAAC
AGAGTATGTCTCGTCCGGGACCTACTTCCCAGGGCTTGCCTCCGTCACAA
CAGCCTCAGGTGCCTCGTCCGGCGCCTCCTGGCTACCCTCAACAACCGCA
GTTCCAAGGCTTCTATCCTCCATATGGACAACGCTTTGGAGCCCCCGGTT
TCCCTCCTGGACCTGGTTTTCCTAATATGCCGTATGGAGCCCCGCCACCA
GGATGGTTTCCTCCCCCGGGTCAAGGATTCCCCCAAGGACCAGGCCAGTT
CCCTCCCCAGATGCCTATTGGACCCCCTGGCCAACACCAGACCCCTCCTC
CGCAGCGACAGGGGGTACCTGGCGCAGGCCCCGTAAATGTCCCTAAACCC
ACCTCTGAGCTTCCCGTTGGTGACCGGCCGTCCAGTAAGCCAGCCAGCCG
GAATGCTACACCCGCGCCTGGAGTCTCTGCTCAGAATGCTCCTCCGCCCC
CTGTTGAATCGAAACCATCTGTAACGGAGGCCGTACAAGCCTCCAGTATT
CCTGCTGCTGCCGCGGCTCCGACTCCGGCCAAGATGCCACCTACTGGACC
CCGGAGTGGACGTGTGCAGCCGGCGATTCCGATCTCTGCTCCCTCCAAGC
CACCTGTTCCTGCTGTAAGCAATCCTCCTGTCCCTGGCGCTGGGAGCAGT
GTGCCGCAAGGTACCGCTCAGGCGGCCATTACCGAGGCTACGCGTGCTGC
CACGGCTGCTGTTGCGGCGGCTATGGCCAAGCTGCCCCAGCCAAACGCGC
CCAAGAAGCCTGCGCATGGAGAAGTGTCCGTTGAAGGAGTAACGAGACAG
ATGGCGGAAATGAAGCCGTATGAGGGCAACCGCGCACCCCGTGGTCATCA
GCATCCCCGCGGACGTGGCGGTCACCGTGCCCCATATCAGGGACAGTCGA
AGAAGGTTGAGGTTCCTGATACGGACTACGACTTCGAGACTGCCAACGCC
AAATTCAACAAGCAAGACCTGGTCAAGGAGGCCATTGCCACTGGGTCGCC
TGCCCATGAGGCTGAGACTGCTTCCATCACTAACGGGGACATTGAAGCGC
CTGATACCAGCGCTGATTCCGTGGCTACCTACAACCGGGCGACTTCTTTC
TTCGATAACATCTCGAGCGAGGCTCGTGATCGTGAAGAGGGAACGGGAGG
CCGTGTGGGTGGCCGTGAATGGCGCGGCGAGGAGGAGAAGCGCAATATCG
AGACCTTCGGGCAGGGTAGCGTTGACGGTTACCGGGGAAGCTACCGTGGC
CGTGGCAGAGGAAGAGGCTATGGTCGTGGCCGCGGTGGCTACGGACGTGG
GTACTCTCGGGGTCGTGGAGGCCTTCGTGGAGGTCGCAACACTTCGCAAG
CCACCGGCGTGCCTACCCAGACATAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:2910285..2912410+

>CAN33_46855-T1 ID=CAN33_46855-T1|Name=CAN33_46855-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6708bp|location=Sequence derived from alignment at NKJJ01000022.1:2910285..2912410+ (Aspergillus niger FDAARGOS_311)
ATGGATATGAACCATTTAATAGGTCAGCGTTTCAACCTGATCTCCAAGAG
TGACATTCGTTATGTTGGAACGTTGCATGAGATCAATCCTGAAGCCTCCA
CCATAGCTCTGGAGAATGTTGTCTCTTTCGGGACCGAGGGTCGTCGAGGC
AATCCCGCTGAGGAGATTGCCCCGTCGGCCAGCGTCTACGAATATATTGT
CTTCCGAGGCAGTGACGTAAAAGACATTAGCGTAGCAGAGGACACGAAGG
AGAACACTCCACCTGAACCTCCTCAGGTGCCGGATGATCCCGCCATCTTA
GGGAGTATGTCTCGTCCGGGACCTACTTCCCAGGGCTTGCCTCCGTCACA
ACAGCCTCAGGTGCCTCGTCCGGCGCCTCCTGGCTACCCTCAACAACCGC
AGTTCCAAGGCTTCTATCCTCCATATGGACAACGCTTTGGAGCCCCCGGT
TTCCCTCCTGGACCTGGTTTTCCTAATATGCCGTATGGAGCCCCGCCACC
AGGATGGTTTCCTCCCCCGGGTCAAGGATTCCCCCAAGGACCAGGCCAGT
TCCCTCCCCAGATGCCTATTGGACCCCCTGGCCAACACCAGACCCCTCCT
CCGCAGCGACAGGGGGTACCTGGCGCAGGCCCCGTAAATGTCCCTAAACC
CACCTCTGAGCTTCCCGTTGGTGACCGGCCGTCCAGTAAGCCAGCCAGCC
GGAATGCTACACCCGCGCCTGGAGTCTCTGCTCAGAATGCTCCTCCGCCC
CCTGTTGAATCGAAACCATCTGTAACGGAGGCCGTACAAGCCTCCAGTAT
TCCTGCTGCTGCCGCGGCTCCGACTCCGGCCAAGATGCCACCTACTGGAC
CCCGGAGTGGACGTGTGCAGCCGGCGATTCCGATCTCTGCTCCCTCCAAG
CCACCTGTTCCTGCTGTAAGCAATCCTCCTGTCCCTGGCGCTGGGAGCAG
TGTGCCGCAAGGTACCGCTCAGGCGGCCATTACCGAGGCTACGCGTGCTG
CCACGGCTGCTGTTGCGGCGGCTATGGCCAAGCTGCCCCAGCCAAACGCG
CCCAAGAAGCCTGCGCATGGAGAAGTGTCCGTTGAAGGAGTAACGAGACA
GATGGCGGAAATGAAGCCGTATGAGGGCAACCGCGCACCCCGTGGTCATC
AGCATCCCCGCGGACGTGGCGGTCACCGTGCCCCATATCAGGGACAGTCG
AAGAAGGTTGAGGTTCCTGATACGGACTACGACTTCGAGACTGCCAACGC
CAAATTCAACAAGCAAGACCTGGTCAAGGAGGCCATTGCCACTGGGTCGC
CTGCCCATGAGGCTGAGACTGCTTCCATCACTAACGGGGACATTGAAGCG
CCTGATACCAGCGCTGATTCCGTGGCTACCTACAACCGGGCGACTTCTTT
CTTCGATAACATCTCGAGCGAGGCTCGTGATCGTGAAGAGGGAACGGGAG
GCCGTGTGGGTGGCCGTGAATGGCGCGGCGAGGAGGAGAAGCGCAATATC
GAGACCTTCGGGCAGGGTAGCGTTGACGGTTACCGGGGAAGCTACCGTGG
CCGTGGCAGAGGAAGAGGCTATGGTCGTGGCCGCGGTGGCTACGGACGTG
GGTACTCTCGGGGTCGTGGAGGCCTTCGTGGAGGTCGCAACACTTCGCAA
GCCACCGGCGTGCCTACCCAGACATAGATGGATATGAACCATTTAATAGG
TCAGCGTTTCAACCTGATCTCCAAGAGTGACATTCGTTATGTTGGAACGT
TGCATGAGATCAATCCTGAAGCCTCCACCATAGCTCTGGAGAATGTTGTC
TCTTTCGGGACCGAGGGTCGTCGAGGCAATCCCGCTGAGGAGATTGCCCC
GTCGGCCAGCGTCTACGAATATATTGTCTTCCGAGGCAGTGACGTAAAAG
ACATTAGCGTAGCAGAGGACACGAAGGAGAACACTCCACCTGAACCTCCT
CAGGTGCCGGATGATCCCGCCATCTTAGGGAGTATGTCTCGTCCGGGACC
TACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTCAGGTGCCTCGTCCGG
CGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAAGGCTTCTATCCTCCA
TATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCCTGGACCTGGTTTTCC
TAATATGCCGTATGGAGCCCCGCCACCAGGATGGTTTCCTCCCCCGGGTC
AAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCCCAGATGCCTATTGGA
CCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCGACAGGGGGTACCTGG
CGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTGAGCTTCCCGTTGGTG
ACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCTACACCCGCGCCTGGA
GTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGAATCGAAACCATCTGT
AACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTGCTGCCGCGGCTCCGA
CTCCGGCCAAGATGCCACCTACTGGACCCCGGAGTGGACGTGTGCAGCCG
GCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGTTCCTGCTGTAAGCAA
TCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGCAAGGTACCGCTCAGG
CGGCCATTACCGAGGCTACGCGTGCTGCCACGGCTGCTGTTGCGGCGGCT
ATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAAGCCTGCGCATGGAGA
AGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGGAAATGAAGCCGTATG
AGGGCAACCGCGCACCCCGTGGTCATCAGCATCCCCGCGGACGTGGCGGT
CACCGTGCCCCATATCAGGGACAGTCGAAGAAGGTTGAGGTTCCTGATAC
GGACTACGACTTCGAGACTGCCAACGCCAAATTCAACAAGCAAGACCTGG
TCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCATGAGGCTGAGACTGCT
TCCATCACTAACGGGGACATTGAAGCGCCTGATACCAGCGCTGATTCCGT
GGCTACCTACAACCGGGCGACTTCTTTCTTCGATAACATCTCGAGCGAGG
CTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTGGGTGGCCGTGAATGG
CGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTTCGGGCAGGGTAGCGT
TGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCAGAGGAAGAGGCTATG
GTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCTCGGGGTCGTGGAGGC
CTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGGCGTGCCTACCCAGAC
ATAGATGGATATGAACCATTTAATAGGTCAGCGTTTCAACCTGATCTCCA
AGAGTGACATTCGTTATGTTGGAACGTTGCATGAGATCAATCCTGAAGCC
TCCACCATAGCTCTGGAGAATGTTGTCTCTTTCGGGACCGAGGGTCGTCG
AGGCAATCCCGCTGAGGAGATTGCCCCGTCGGCCAGCGTCTACGAATATA
TTGTCTTCCGAGGCAGTGACGTAAAAGACATTAGCGTAGCAGAGGACACG
AAGGAGAACACTCCACCTGAACCTCCTCAGGTGCCGGATGATCCCGCCAT
CTTAGGGAGTATGTCTCGTCCGGGACCTACTTCCCAGGGCTTGCCTCCGT
CACAACAGCCTCAGGTGCCTCGTCCGGCGCCTCCTGGCTACCCTCAACAA
CCGCAGTTCCAAGGCTTCTATCCTCCATATGGACAACGCTTTGGAGCCCC
CGGTTTCCCTCCTGGACCTGGTTTTCCTAATATGCCGTATGGAGCCCCGC
CACCAGGATGGTTTCCTCCCCCGGGTCAAGGATTCCCCCAAGGACCAGGC
CAGTTCCCTCCCCAGATGCCTATTGGACCCCCTGGCCAACACCAGACCCC
TCCTCCGCAGCGACAGGGGGTACCTGGCGCAGGCCCCGTAAATGTCCCTA
AACCCACCTCTGAGCTTCCCGTTGGTGACCGGCCGTCCAGTAAGCCAGCC
AGCCGGAATGCTACACCCGCGCCTGGAGTCTCTGCTCAGAATGCTCCTCC
GCCCCCTGTTGAATCGAAACCATCTGTAACGGAGGCCGTACAAGCCTCCA
GTATTCCTGCTGCTGCCGCGGCTCCGACTCCGGCCAAGATGCCACCTACT
GGACCCCGGAGTGGACGTGTGCAGCCGGCGATTCCGATCTCTGCTCCCTC
CAAGCCACCTGTTCCTGCTGTAAGCAATCCTCCTGTCCCTGGCGCTGGGA
GCAGTGTGCCGCAAGGTACCGCTCAGGCGGCCATTACCGAGGCTACGCGT
GCTGCCACGGCTGCTGTTGCGGCGGCTATGGCCAAGCTGCCCCAGCCAAA
CGCGCCCAAGAAGCCTGCGCATGGAGAAGTGTCCGTTGAAGGAGTAACGA
GACAGATGGCGGAAATGAAGCCGTATGAGGGCAACCGCGCACCCCGTGGT
CATCAGCATCCCCGCGGACGTGGCGGTCACCGTGCCCCATATCAGGGACA
GTCGAAGAAGGTTGAGGTTCCTGATACGGACTACGACTTCGAGACTGCCA
ACGCCAAATTCAACAAGCAAGACCTGGTCAAGGAGGCCATTGCCACTGGG
TCGCCTGCCCATGAGGCTGAGACTGCTTCCATCACTAACGGGGACATTGA
AGCGCCTGATACCAGCGCTGATTCCGTGGCTACCTACAACCGGGCGACTT
CTTTCTTCGATAACATCTCGAGCGAGGCTCGTGATCGTGAAGAGGGAACG
GGAGGCCGTGTGGGTGGCCGTGAATGGCGCGGCGAGGAGGAGAAGCGCAA
TATCGAGACCTTCGGGCAGGGTAGCGTTGACGGTTACCGGGGAAGCTACC
GTGGCCGTGGCAGAGGAAGAGGCTATGGTCGTGGCCGCGGTGGCTACGGA
CGTGGGTACTCTCGGGGTCGTGGAGGCCTTCGTGGAGGTCGCAACACTTC
GCAAGCCACCGGCGTGCCTACCCAGACATAGATGGATATGAACCATTTAA
TAGGTCAGCGTTTCAACCTGATCTCCAAGAGTGACATTCGTTATGTTGGA
ACGTTGCATGAGATCAATCCTGAAGCCTCCACCATAGCTCTGGAGAATGT
TGTCTCTTTCGGGACCGAGGGTCGTCGAGGCAATCCCGCTGAGGAGATTG
CCCCGTCGGCCAGCGTCTACGAATATATTGTCTTCCGAGGCAGTGACGTA
AAAGACATTAGCGTAGCAGAGGACACGAAGGAGAACACTCCACCTGAACC
TCCTCAGGTGCCGGATGATCCCGCCATCTTAGGGAGTATGTCTCGTCCGG
GACCTACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTCAGGTGCCTCGT
CCGGCGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAAGGCTTCTATCC
TCCATATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCCTGGACCTGGTT
TTCCTAATATGCCGTATGGAGCCCCGCCACCAGGATGGTTTCCTCCCCCG
GGTCAAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCCCAGATGCCTAT
TGGACCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCGACAGGGGGTAC
CTGGCGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTGAGCTTCCCGTT
GGTGACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCTACACCCGCGCC
TGGAGTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGAATCGAAACCAT
CTGTAACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTGCTGCCGCGGCT
CCGACTCCGGCCAAGATGCCACCTACTGGACCCCGGAGTGGACGTGTGCA
GCCGGCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGTTCCTGCTGTAA
GCAATCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGCAAGGTACCGCT
CAGGCGGCCATTACCGAGGCTACGCGTGCTGCCACGGCTGCTGTTGCGGC
GGCTATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAAGCCTGCGCATG
GAGAAGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGGAAATGAAGCCG
TATGAGGGCAACCGCGCACCCCGTGGTCATCAGCATCCCCGCGGACGTGG
CGGTCACCGTGCCCCATATCAGGGACAGTCGAAGAAGGTTGAGGTTCCTG
ATACGGACTACGACTTCGAGACTGCCAACGCCAAATTCAACAAGCAAGAC
CTGGTCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCATGAGGCTGAGAC
TGCTTCCATCACTAACGGGGACATTGAAGCGCCTGATACCAGCGCTGATT
CCGTGGCTACCTACAACCGGGCGACTTCTTTCTTCGATAACATCTCGAGC
GAGGCTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTGGGTGGCCGTGA
ATGGCGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTTCGGGCAGGGTA
GCGTTGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCAGAGGAAGAGGC
TATGGTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCTCGGGGTCGTGG
AGGCCTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGGCGTGCCTACCC
AGACATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_46855CAN33_46855Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46855-T1.exon1CAN33_46855-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_46855-T1.exon2CAN33_46855-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_46855-T1.exon3CAN33_46855-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_46855-T1.exon4CAN33_46855-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46855-T1.cdsCAN33_46855-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_46855-T1CAN33_46855-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR025762
DBxrefInterPro:IPR025768
DBxrefInterPro:IPR025761
DBxrefInterPro:IPR019050
DBxrefInterPro:IPR025609
DBxrefPFAM:PF12701
DBxrefPFAM:PF09532
ProductScd6-like Sm domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:2910285..2912410 +
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