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CAN33_47290-T1, CAN33_47290-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47290-T1
Unique NameCAN33_47290-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3200308..3201526+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47290-T1 ID=CAN33_47290-T1|Name=CAN33_47290-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1219bp|location=Sequence derived from alignment at NKJJ01000022.1:3200308..3201526+ (Aspergillus niger FDAARGOS_311)
ATGGATCCTTTTTCTGCAGAGGGTGGTATGTTTTGTCCATTGAGCAAACA
CACACATACAATCCCCCCTTATGACCTCAAAGCGCTAACTTGCCTCATCC
CCCCAATAACAGAGCTAATCAACATCCACAATGCCTTTCACCAAGGCCAA
TACCAAGCCGTAATCGAATTCGACACCTCCGCTCTATCCCCCGAGAACCA
ACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATCGCCCTAGGCCAAT
CAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGAGACCCCCGATCTA
GCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAGATGCCGAATCGGC
GTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCCGACAATGCTACTG
TACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGGACAAAGTGAGGAT
GCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCGAGGCGTGAGTTTT
AGCCGTCAATTTGCCATGTGCACTGTCTGTATAATGGGTGGAACTCAGGA
AGCTAATGGACAATGATATAGTGTGGCCTTGATCGTCCAGATTCATCTTC
AGCAGAACCGCTCTGATCTCGCCTTGAAGGAAGTCCAGGCTGCAAAGCGC
TGGGCGCAGGATTCCCTCTTGGTTAACTTGGCTGAGTCGTGGGTGGGAAT
GAGAGTGGTATGTGTCACACCCTGCTGCAGCCTCCTTGCTGTTTGTTCGA
GGGTAAGCGATGAAACTAATATGCTGTTGCTTCGGCTTTTAGGGCGGCGA
GAAATACCAGGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTA
GCAGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCAT
CTCGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCA
GTATCCCGACGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAACGTCT
TGGCTGGCAAGCCCTCGGAAGAGTTGGAGCAGTACGTTCACCCTCCTACC
CCTAAACCCATCGATCTGCGGACGAATGTGTAGCTAACGCATGCATTGCA
CTTACTATAGGCGCCTCGAACAGATCAACCCCGCGCACCCCCTGCTCTCC
GATCTTCAAGCAAAGAGTGAACTGTTCGATACCGCGGCTGCGAAGTATGC
TCCCAGAGTGTCGGCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:3200308..3201526+

>CAN33_47290-T1 ID=CAN33_47290-T1|Name=CAN33_47290-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4440bp|location=Sequence derived from alignment at NKJJ01000022.1:3200308..3201526+ (Aspergillus niger FDAARGOS_311)
ATGGATCCTTTTTCTGCAGAGGGTGAGCTAATCAACATCCACAATGCCTT
TCACCAAGGCCAATACCAAGCCGTAATCGAATTCGACACCTCCGCTCTAT
CCCCCGAGAACCAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATC
GCCCTAGGCCAATCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGA
GACCCCCGATCTAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAG
ATGCCGAATCGGCGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCC
GACAATGCTACTGTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGG
ACAAAGTGAGGATGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCG
AGGCTGTGGCCTTGATCGTCCAGATTCATCTTCAGCAGAACCGCTCTGAT
CTCGCCTTGAAGGAAGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCCCT
CTTGGTTAACTTGGCTGAGTCGTGGGTGGGAATGAGAGTGGGCGGCGAGA
AATACCAGGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTAGC
AGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCATCT
CGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCAGT
ATCCCGACGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAACGTCTTG
GCTGGCAAGCCCTCGGAAGAGTTGGAGCAGCGCCTCGAACAGATCAACCC
CGCGCACCCCCTGCTCTCCGATCTTCAAGCAAAGAGTGAACTGTTCGATA
CCGCGGCTGCGAAGTATGCTCCCAGAGTGTCGGCTTAAATGGATCCTTTT
TCTGCAGAGGGTGAGCTAATCAACATCCACAATGCCTTTCACCAAGGCCA
ATACCAAGCCGTAATCGAATTCGACACCTCCGCTCTATCCCCCGAGAACC
AACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATCGCCCTAGGCCAA
TCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGAGACCCCCGATCT
AGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAGATGCCGAATCGG
CGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCCGACAATGCTACT
GTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGGACAAAGTGAGGA
TGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCGAGGCTGTGGCCT
TGATCGTCCAGATTCATCTTCAGCAGAACCGCTCTGATCTCGCCTTGAAG
GAAGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCCCTCTTGGTTAACTT
GGCTGAGTCGTGGGTGGGAATGAGAGTGGGCGGCGAGAAATACCAGGCTG
CATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTAGCAGCTCCGCGCCC
CTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCATCTCGGTCGGTTGCC
TGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCAGTATCCCGACGAGG
CGGAACTGATTGCGAACACTGTTGTGCTGAACGTCTTGGCTGGCAAGCCC
TCGGAAGAGTTGGAGCAGCGCCTCGAACAGATCAACCCCGCGCACCCCCT
GCTCTCCGATCTTCAAGCAAAGAGTGAACTGTTCGATACCGCGGCTGCGA
AGTATGCTCCCAGAGTGTCGGCTTAAATGGATCCTTTTTCTGCAGAGGGT
GAGCTAATCAACATCCACAATGCCTTTCACCAAGGCCAATACCAAGCCGT
AATCGAATTCGACACCTCCGCTCTATCCCCCGAGAACCAACTCCCTGCCC
GTGTCCTCCAGCTTCGCGCCAAGATCGCCCTAGGCCAATCAGATGAAGTT
CTCGCCGATGTCGAAGGCGAGGAAGAGACCCCCGATCTAGCGGCCGTGAA
AGCGCTGGCCCAGCAGTCGACTGGAGATGCCGAATCGGCGTTGAAGCTGG
CTCAGGACCTTGCGGAGAATTACCCCGACAATGCTACTGTACAGGTTCTG
TGCGGGACGTTGCTGCAGGCTCAGGGACAAAGTGAGGATGCGTTGGCTTT
ATTGACCAAGCATCAGGGGAACCTCGAGGCTGTGGCCTTGATCGTCCAGA
TTCATCTTCAGCAGAACCGCTCTGATCTCGCCTTGAAGGAAGTCCAGGCT
GCAAAGCGCTGGGCGCAGGATTCCCTCTTGGTTAACTTGGCTGAGTCGTG
GGTGGGAATGAGAGTGGGCGGCGAGAAATACCAGGCTGCATTCTACGTCT
ACGAGGAATTGGCTTCCGCTCCTAGCAGCTCCGCGCCCCTCTCTATCGTT
GGTCAGGCCGTGGCAGAACTCCATCTCGGTCGGTTGCCTGAGGCCGAGGC
CGCCTTGACTGCAGCTCTGCAGCAGTATCCCGACGAGGCGGAACTGATTG
CGAACACTGTTGTGCTGAACGTCTTGGCTGGCAAGCCCTCGGAAGAGTTG
GAGCAGCGCCTCGAACAGATCAACCCCGCGCACCCCCTGCTCTCCGATCT
TCAAGCAAAGAGTGAACTGTTCGATACCGCGGCTGCGAAGTATGCTCCCA
GAGTGTCGGCTTAAATGGATCCTTTTTCTGCAGAGGGTGAGCTAATCAAC
ATCCACAATGCCTTTCACCAAGGCCAATACCAAGCCGTAATCGAATTCGA
CACCTCCGCTCTATCCCCCGAGAACCAACTCCCTGCCCGTGTCCTCCAGC
TTCGCGCCAAGATCGCCCTAGGCCAATCAGATGAAGTTCTCGCCGATGTC
GAAGGCGAGGAAGAGACCCCCGATCTAGCGGCCGTGAAAGCGCTGGCCCA
GCAGTCGACTGGAGATGCCGAATCGGCGTTGAAGCTGGCTCAGGACCTTG
CGGAGAATTACCCCGACAATGCTACTGTACAGGTTCTGTGCGGGACGTTG
CTGCAGGCTCAGGGACAAAGTGAGGATGCGTTGGCTTTATTGACCAAGCA
TCAGGGGAACCTCGAGGCTGTGGCCTTGATCGTCCAGATTCATCTTCAGC
AGAACCGCTCTGATCTCGCCTTGAAGGAAGTCCAGGCTGCAAAGCGCTGG
GCGCAGGATTCCCTCTTGGTTAACTTGGCTGAGTCGTGGGTGGGAATGAG
AGTGGGCGGCGAGAAATACCAGGCTGCATTCTACGTCTACGAGGAATTGG
CTTCCGCTCCTAGCAGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTG
GCAGAACTCCATCTCGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGC
AGCTCTGCAGCAGTATCCCGACGAGGCGGAACTGATTGCGAACACTGTTG
TGCTGAACGTCTTGGCTGGCAAGCCCTCGGAAGAGTTGGAGCAGCGCCTC
GAACAGATCAACCCCGCGCACCCCCTGCTCTCCGATCTTCAAGCAAAGAG
TGAACTGTTCGATACCGCGGCTGCGAAGTATGCTCCCAGAGTGTCGGCTT
AAATGGATCCTTTTTCTGCAGAGGGTGAGCTAATCAACATCCACAATGCC
TTTCACCAAGGCCAATACCAAGCCGTAATCGAATTCGACACCTCCGCTCT
ATCCCCCGAGAACCAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGA
TCGCCCTAGGCCAATCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAA
GAGACCCCCGATCTAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGG
AGATGCCGAATCGGCGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACC
CCGACAATGCTACTGTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAG
GGACAAAGTGAGGATGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCT
CGAGGCTGTGGCCTTGATCGTCCAGATTCATCTTCAGCAGAACCGCTCTG
ATCTCGCCTTGAAGGAAGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCC
CTCTTGGTTAACTTGGCTGAGTCGTGGGTGGGAATGAGAGTGGGCGGCGA
GAAATACCAGGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTA
GCAGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCAT
CTCGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCA
GTATCCCGACGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAACGTCT
TGGCTGGCAAGCCCTCGGAAGAGTTGGAGCAGCGCCTCGAACAGATCAAC
CCCGCGCACCCCCTGCTCTCCGATCTTCAAGCAAAGAGTGAACTGTTCGA
TACCGCGGCTGCGAAGTATGCTCCCAGAGTGTCGGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_47290CAN33_47290Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47290-T1CAN33_47290-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47290-T1.exon1CAN33_47290-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_47290-T1.exon2CAN33_47290-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_47290-T1.exon3CAN33_47290-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_47290-T1.exon4CAN33_47290-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_47290-T1.exon5CAN33_47290-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47290-T1.cdsCAN33_47290-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR006822
DBxrefPFAM:PF13174
DBxrefPFAM:PF13432
DBxrefPFAM:PF04733
ProductCoatomer epsilon subunit family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3200308..3201526 +
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