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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:621647..622403- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4730-T1 ID=CAN33_4730-T1|Name=CAN33_4730-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=757bp|location=Sequence derived from alignment at NKJJ01000019.1:621647..622403- (Aspergillus niger FDAARGOS_311)
ATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCG
CATCCAGAAGCTCGTGCTTAACATCTCCGTCGGCGAGTCTGGTGACAGAC
TTACTCGCGCTGCTAAGGTGCTCGAGCAGCTGAGCGGTCAGACTCCGGTC
TACAGTAAGAACGCCCGATCCCGACGAATCCGAGAAATTCGAACACAAAG
CCGCCGAGGAAGGAGGATATGACAACTGTGTTATGGAATGGATGGCTGAT
GGGATGATTTTTTCAACGTTTAGGCAAGGCCCGTTACACCGTCCGTACCT
TCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGT
CCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGA
GCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCT
CCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTATCTAC
GGCATGGACTTCTACTGCTGCATGTGAGTGCATTTGGACCTCTACGCAGT
CCTGGTTCGACAGATCCATCGGTGTCAATCCAGATCGAGCAGGACAAGTC
GAGTATCAGCAACTGACTTGGAATCAATAGGACCCGCCCTGGTGAGCGTG
TCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTATC
ACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGTATCGT
CCGGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:621647..622403- >CAN33_4730-T1 ID=CAN33_4730-T1|Name=CAN33_4730-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1593bp|location=Sequence derived from alignment at NKJJ01000019.1:621647..622403- (Aspergillus niger FDAARGOS_311)
GACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGCCGCTGCAAGGCCCGTA
TCGGCTCCCAGCACCGTATCACCCAGAACGAGACCATCAAGTGGTTCAAG
AACCGCTTCGACGGTATCGTCCGGTAAGCAAGGCCCGTTACACCGTCCGT
ACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCG
TGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGT
ACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGT
ATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTAT
CTACGGCATGGACTTCTACTGCTGCATATGCAGTCGGAATCCAAGGACAA
GTCCGCCAACCCTATGCGCGAGCTGCGCATCCAGAAGCTCGTGCTTAACA
TCTCCGTCGGCGAGTCTGGTGACAGACTTACTCGCGCTGCTAAGGTGCTC
GAGCAGCTGAGCGGTCAGACTCCGGTCTACAGACCCGCCCTGGTGAGCGT
GTCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTAT
CACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGTATCG
TCCGGTAAGCAAGGCCCGTTACACCGTCCGTACCTTCGGTATCCGTCGTA
ACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGTCCCAAGGCCGAGGAG
ATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGAGCTCCGCAAGCGCAA
CTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCTCCGAGCACATCGATC
TGGGTATCAAGTACGACCCCGGTATCGGTATCTACGGCATGGACTTCTAC
TGCTGCATATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGC
GAGCTGCGCATCCAGAAGCTCGTGCTTAACATCTCCGTCGGCGAGTCTGG
TGACAGACTTACTCGCGCTGCTAAGGTGCTCGAGCAGCTGAGCGGTCAGA
CTCCGGTCTACAGACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGCCGCT
GCAAGGCCCGTATCGGCTCCCAGCACCGTATCACCCAGAACGAGACCATC
AAGTGGTTCAAGAACCGCTTCGACGGTATCGTCCGGTAAGCAAGGCCCGT
TACACCGTCCGTACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCA
CGTTACCGTCCGTGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCA
AGGTCAAGGAGTACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAAC
TTCGGTTTCGGTATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCC
CGGTATCGGTATCTACGGCATGGACTTCTACTGCTGCATATGCAGTCGGA
ATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCGCATCCAGAAGC
TCGTGCTTAACATCTCCGTCGGCGAGTCTGGTGACAGACTTACTCGCGCT
GCTAAGGTGCTCGAGCAGCTGAGCGGTCAGACTCCGGTCTACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264X8J |
| DBxref | InterPro:IPR020929 |
| DBxref | InterPro:IPR031310 |
| DBxref | InterPro:IPR002132 |
| DBxref | InterPro:IPR031309 |
| DBxref | InterPro:IPR022803 |
| DBxref | PFAM:PF00673 |
| DBxref | PFAM:PF00281 |
| Product | 60S ribosomal protein L11 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:621647..622403 - |
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