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CAN33_47445-T1, CAN33_47445-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47445-T1
Unique NameCAN33_47445-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3292507..3293605-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47445-T1 ID=CAN33_47445-T1|Name=CAN33_47445-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1099bp|location=Sequence derived from alignment at NKJJ01000022.1:3292507..3293605- (Aspergillus niger FDAARGOS_311)
ATGGCACCTCCCTCGTCTCCTACTGACCACCACATCGTGGCTCTGCAGGG
CGATTTTATCAGAATCCCCAAGTTCGAACTACCCGCTCCTTATACTCACA
CCACAAAAGTCTACGGGCTGACATCGCTCTCCGAACTTCATGAACGGATA
CACGATGCCTCTATCTTAGTTCTATCGGCGCTGCGAATCGATGCAGAGGC
ACTGTCTCCCGAGGTGACACCATACCTGAAACTGATCGTGATAGTCGCCG
CAGGCAGCGACTGCGTGGATCTCGAAGCATGCAGAAAGAGGGGCATTACT
GTGAGCAACTGTCCCGCAGCAAACACCGAGGCTGTTTCCGAGCATGCAAT
TGGACTATACTTCTCTGTACGCCGTAGAGTCCTGCGCGCGCACACATTGA
CCCGCGCGGGCGAATGGACCCGGAAAAAGACCCTCGTCTTCGATTGTGTG
AATCACGACGGAACGCAACCCCTGACCTGCCAGGAGGAGGTGGCCGGAAT
TATCGGAAATGGCGCTGTCGGTACGTGCTTCCGGCGATCCATGGTTTATA
ATTCGCTTGAATCCGAGCCTGACTGACTCAAATTCAGGGAAGCGGATCGC
CCAATTAGCCCGTGGGCTGGGAATGAAGGTCATTATCGCAGGCCGCAAAG
CACTCGGTGATGGTAGCACACCGACTCATGCTGGTGACGGTGAAGAGAGA
GTTTCTTTCGCCGAAGTGATTAAGCGGAGCACGGTGATTTTCATTGCAGT
TCCCCTTGCTCCTTCGACGCGGAATCTGCTATCAGCTACAGAATTCGAAG
CCATGTCGCCTCATGCGGTCTTGGTCAATGTCTCGAGGGGAGGAGTGGTG
GATGAAGTGGCACTTGTCCGAGCATTGCAGGAGAACCGCATCACCGGTGC
TGCAACCGATGTGTTCGAAAAAGAACCTGCCGGACCGGAAAACTGTGCTC
TGCTGGGTGAAGGGACCGAGGATCTGAACCTGGTTCTTACACCTCATATT
GCATGGGCCACGCAGAAGACGTTGATCAACTATGAGCGGAAATTGAAGGA
GACCGTCGAGAAGTGGATGGTGGGGGAATTCATGAATGTAGTGACATGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:3292507..3293605-

>CAN33_47445-T1 ID=CAN33_47445-T1|Name=CAN33_47445-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2064bp|location=Sequence derived from alignment at NKJJ01000022.1:3292507..3293605- (Aspergillus niger FDAARGOS_311)
GGAAGCGGATCGCCCAATTAGCCCGTGGGCTGGGAATGAAGGTCATTATC
GCAGGCCGCAAAGCACTCGGTGATGGTAGCACACCGACTCATGCTGGTGA
CGGTGAAGAGAGAGTTTCTTTCGCCGAAGTGATTAAGCGGAGCACGGTGA
TTTTCATTGCAGTTCCCCTTGCTCCTTCGACGCGGAATCTGCTATCAGCT
ACAGAATTCGAAGCCATGTCGCCTCATGCGGTCTTGGTCAATGTCTCGAG
GGGAGGAGTGGTGGATGAAGTGGCACTTGTCCGAGCATTGCAGGAGAACC
GCATCACCGGTGCTGCAACCGATGTGTTCGAAAAAGAACCTGCCGGACCG
GAAAACTGTGCTCTGCTGGGTGAAGGGACCGAGGATCTGAACCTGGTTCT
TACACCTCATATTGCATGGGCCACGCAGAAGACGTTGATCAACTATGAGC
GGAAATTGAAGGAGACCGTCGAGAAGTGGATGGTGGGGGAATTCATGAAT
GTAGTGACATGAATGGCACCTCCCTCGTCTCCTACTGACCACCACATCGT
GGCTCTGCAGGGCGATTTTATCAGAATCCCCAAGTTCGAACTACCCGCTC
CTTATACTCACACCACAAAAGTCTACGGGCTGACATCGCTCTCCGAACTT
CATGAACGGATACACGATGCCTCTATCTTAGTTCTATCGGCGCTGCGAAT
CGATGCAGAGGCACTGTCTCCCGAGGTGACACCATACCTGAAACTGATCG
TGATAGTCGCCGCAGGCAGCGACTGCGTGGATCTCGAAGCATGCAGAAAG
AGGGGCATTACTGTGAGCAACTGTCCCGCAGCAAACACCGAGGCTGTTTC
CGAGCATGCAATTGGACTATACTTCTCTGTACGCCGTAGAGTCCTGCGCG
CGCACACATTGACCCGCGCGGGCGAATGGACCCGGAAAAAGACCCTCGTC
TTCGATTGTGTGAATCACGACGGAACGCAACCCCTGACCTGCCAGGAGGA
GGTGGCCGGAATTATCGGAAATGGCGCTGTCGGGAAGCGGATCGCCCAAT
TAGCCCGTGGGCTGGGAATGAAGGTCATTATCGCAGGCCGCAAAGCACTC
GGTGATGGTAGCACACCGACTCATGCTGGTGACGGTGAAGAGAGAGTTTC
TTTCGCCGAAGTGATTAAGCGGAGCACGGTGATTTTCATTGCAGTTCCCC
TTGCTCCTTCGACGCGGAATCTGCTATCAGCTACAGAATTCGAAGCCATG
TCGCCTCATGCGGTCTTGGTCAATGTCTCGAGGGGAGGAGTGGTGGATGA
AGTGGCACTTGTCCGAGCATTGCAGGAGAACCGCATCACCGGTGCTGCAA
CCGATGTGTTCGAAAAAGAACCTGCCGGACCGGAAAACTGTGCTCTGCTG
GGTGAAGGGACCGAGGATCTGAACCTGGTTCTTACACCTCATATTGCATG
GGCCACGCAGAAGACGTTGATCAACTATGAGCGGAAATTGAAGGAGACCG
TCGAGAAGTGGATGGTGGGGGAATTCATGAATGTAGTGACATGAATGGCA
CCTCCCTCGTCTCCTACTGACCACCACATCGTGGCTCTGCAGGGCGATTT
TATCAGAATCCCCAAGTTCGAACTACCCGCTCCTTATACTCACACCACAA
AAGTCTACGGGCTGACATCGCTCTCCGAACTTCATGAACGGATACACGAT
GCCTCTATCTTAGTTCTATCGGCGCTGCGAATCGATGCAGAGGCACTGTC
TCCCGAGGTGACACCATACCTGAAACTGATCGTGATAGTCGCCGCAGGCA
GCGACTGCGTGGATCTCGAAGCATGCAGAAAGAGGGGCATTACTGTGAGC
AACTGTCCCGCAGCAAACACCGAGGCTGTTTCCGAGCATGCAATTGGACT
ATACTTCTCTGTACGCCGTAGAGTCCTGCGCGCGCACACATTGACCCGCG
CGGGCGAATGGACCCGGAAAAAGACCCTCGTCTTCGATTGTGTGAATCAC
GACGGAACGCAACCCCTGACCTGCCAGGAGGAGGTGGCCGGAATTATCGG
AAATGGCGCTGTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_47445CAN33_47445Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47445-T1CAN33_47445-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47445-T1.cdsCAN33_47445-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47445-T1.exon2CAN33_47445-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_47445-T1.exon1CAN33_47445-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR006139
DBxrefInterPro:IPR006140
DBxrefPFAM:PF02826
DBxrefPFAM:PF00389
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3292507..3293605 -
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