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CAN33_47545-T1, CAN33_47545-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_47545-T1
Unique NameCAN33_47545-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3371062..3372831-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_47545-T1 ID=CAN33_47545-T1|Name=CAN33_47545-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1770bp|location=Sequence derived from alignment at NKJJ01000022.1:3371062..3372831- (Aspergillus niger FDAARGOS_311)
ATGGCGGACATATCAGGCAACATGCTGAAGCGGCCTCACCCCGAGGACCA
AGACAACAATACTCAGAAAAGACCTCGTTCCAATCATGGATCTCCAGTGC
CAGCTCAGGGCGCACCTGCCGCGGGCAAGGTTGATATTGAGAAGATGGTG
GCCGAAGCAAGGGCAAAAGCAGAAGCTGTGCGTGCCAGACTTCAAGCGGC
AAAGGGTATATCGCCATCACCTACACCGGCTGCATCAAGTGCCAGCCCTA
CACCACCTGCCGCCAGTCCAGCCATGTCGAGATTGGAACAAATGAAAGCT
AGAGTGGCAGCAGCGACCAGTCGCGCCAACGCTGCTCCTCCGCAACGACC
CGTCCCCACGCCGACTCCTCAACCTCCCCCATTCGAAGATGAAGATGATG
GCTCGTCGCGAGCTCGAGGTGGTCTGGATGTCGGTCTTCACCCTGCTTTG
CTCTCCGATACACTCGACTTTCGGGGTGCGAAAGGACGGCCAGCTTCCCA
AAATAAAAACCGACGTACAGAATCACCAGCTACCGCGGGGAGGCCAGATC
GAGCTGGACTTGATCTATCGGGGCCGTCTATAGAGGAAATTAAGAACAAT
CCATACTTTGATCCGAACCTTGGTCCGAAGGCAACAGTTGCAAAGCCCCG
ACAAACACGACAGCTCATCTTCAACCAGAAGGGCAAATATATACAGCAGG
CCGCCGCTCTCCGTCGGCAGGCTCAGTTGGAAGCTATGAAGAAGCGGATT
GCGGAAAGAGCGCGGCAAGCGGGTATTGATGAAGACTTGGATGTTGAAAA
GGCCTTCCTCGTGCCGGCCCCTCCCGCAATTGAATGGTGGGACGAAGGCC
TAGTAGACGGCGAGGACTATTCGGGCATTGAAAATGAACAGAACCTCAAA
ATTGACACGCCTGACTCGATCATCACGCAATACGTACAACATCCAGTTCT
TCTCGATCCTCCGCAGGAAAAGCTACTACCAGCACAGAAGCCTATGTATC
TTACGCCAAAGGAACAGGCGAAGATCCGTCGCCAGCGCCGCATGGCAGAT
CTGAAGGAACAACAAGCCAAGATCCGACTGGGTCTCGAGCCAGCACCTCC
ACCGAAGGTCAAGAAATCGAACCTGATGCGAGTCCTGGGTGAACAAGCCG
TCAAGGATCCCACGGCCGTGGAGGCACGCGTGAACCGGGAAATCGCAGAA
CGTCGAGAAAAGCACGAGACTGCGAATGCGGAGCGCAAACTCACCAAAGA
AGAACGCCGAGAGAAGCTTGCTCGGCAACAGGAGGCCGATGCCGAGAAGG
GTATCCAAATGACCGTTTATCGAATCGACAGCCTCGCCAACGGGCGGAAC
CGCTTCAAAATCAGCAAGAATGCTGAACAGAACGCTCTCACAGGGGTATG
CGTCATGCACCCTCGCTTCAACCTCGTGATTGTCGAGGGAGGCTCCCACT
CTATCAACAACTACAGAAAGCTCATGATGAACCGGATTGACTGGACTGAG
AACGCAGGCCCGAACGCGGTGCGCGAGGGCAACCGCGAGGCCCAAGCCGC
CTGGCTAGCAGCTGAAGATGAGCAAACAGGGGAACTGAAAGATCTTAGTT
CCAATACCTGCGAACTCGTCTGGGAAGGTCAGGTCAAAGCCCGCGCGTTC
CGGAAATGGCTGGGGGCGCGAGTGTGTGAAACGGATTCCCAAGCTAAGGA
TGTCTTGGCCCGCGCGAAGCTGGAGAATTTCTGGGTTTTGGCGAAGAGTG
CCAAACAGAACGAGTCGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:3371062..3372831-

>CAN33_47545-T1 ID=CAN33_47545-T1|Name=CAN33_47545-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1770bp|location=Sequence derived from alignment at NKJJ01000022.1:3371062..3372831- (Aspergillus niger FDAARGOS_311)
ATGGCGGACATATCAGGCAACATGCTGAAGCGGCCTCACCCCGAGGACCA
AGACAACAATACTCAGAAAAGACCTCGTTCCAATCATGGATCTCCAGTGC
CAGCTCAGGGCGCACCTGCCGCGGGCAAGGTTGATATTGAGAAGATGGTG
GCCGAAGCAAGGGCAAAAGCAGAAGCTGTGCGTGCCAGACTTCAAGCGGC
AAAGGGTATATCGCCATCACCTACACCGGCTGCATCAAGTGCCAGCCCTA
CACCACCTGCCGCCAGTCCAGCCATGTCGAGATTGGAACAAATGAAAGCT
AGAGTGGCAGCAGCGACCAGTCGCGCCAACGCTGCTCCTCCGCAACGACC
CGTCCCCACGCCGACTCCTCAACCTCCCCCATTCGAAGATGAAGATGATG
GCTCGTCGCGAGCTCGAGGTGGTCTGGATGTCGGTCTTCACCCTGCTTTG
CTCTCCGATACACTCGACTTTCGGGGTGCGAAAGGACGGCCAGCTTCCCA
AAATAAAAACCGACGTACAGAATCACCAGCTACCGCGGGGAGGCCAGATC
GAGCTGGACTTGATCTATCGGGGCCGTCTATAGAGGAAATTAAGAACAAT
CCATACTTTGATCCGAACCTTGGTCCGAAGGCAACAGTTGCAAAGCCCCG
ACAAACACGACAGCTCATCTTCAACCAGAAGGGCAAATATATACAGCAGG
CCGCCGCTCTCCGTCGGCAGGCTCAGTTGGAAGCTATGAAGAAGCGGATT
GCGGAAAGAGCGCGGCAAGCGGGTATTGATGAAGACTTGGATGTTGAAAA
GGCCTTCCTCGTGCCGGCCCCTCCCGCAATTGAATGGTGGGACGAAGGCC
TAGTAGACGGCGAGGACTATTCGGGCATTGAAAATGAACAGAACCTCAAA
ATTGACACGCCTGACTCGATCATCACGCAATACGTACAACATCCAGTTCT
TCTCGATCCTCCGCAGGAAAAGCTACTACCAGCACAGAAGCCTATGTATC
TTACGCCAAAGGAACAGGCGAAGATCCGTCGCCAGCGCCGCATGGCAGAT
CTGAAGGAACAACAAGCCAAGATCCGACTGGGTCTCGAGCCAGCACCTCC
ACCGAAGGTCAAGAAATCGAACCTGATGCGAGTCCTGGGTGAACAAGCCG
TCAAGGATCCCACGGCCGTGGAGGCACGCGTGAACCGGGAAATCGCAGAA
CGTCGAGAAAAGCACGAGACTGCGAATGCGGAGCGCAAACTCACCAAAGA
AGAACGCCGAGAGAAGCTTGCTCGGCAACAGGAGGCCGATGCCGAGAAGG
GTATCCAAATGACCGTTTATCGAATCGACAGCCTCGCCAACGGGCGGAAC
CGCTTCAAAATCAGCAAGAATGCTGAACAGAACGCTCTCACAGGGGTATG
CGTCATGCACCCTCGCTTCAACCTCGTGATTGTCGAGGGAGGCTCCCACT
CTATCAACAACTACAGAAAGCTCATGATGAACCGGATTGACTGGACTGAG
AACGCAGGCCCGAACGCGGTGCGCGAGGGCAACCGCGAGGCCCAAGCCGC
CTGGCTAGCAGCTGAAGATGAGCAAACAGGGGAACTGAAAGATCTTAGTT
CCAATACCTGCGAACTCGTCTGGGAAGGTCAGGTCAAAGCCCGCGCGTTC
CGGAAATGGCTGGGGGCGCGAGTGTGTGAAACGGATTCCCAAGCTAAGGA
TGTCTTGGCCCGCGCGAAGCTGGAGAATTTCTGGGTTTTGGCGAAGAGTG
CCAAACAGAACGAGTCGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_47545CAN33_47545Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47545-T1.cdsCAN33_47545-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47545-T1.exon1CAN33_47545-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_47545-T1CAN33_47545-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092621ZV
DBxrefInterPro:IPR010541
DBxrefInterPro:IPR013881
DBxrefPFAM:PF08572
DBxrefPFAM:PF06544
Productpre-mRNA processing factor 3 (PRP3) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3371062..3372831 -
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