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CAN33_4795-T1, CAN33_4795-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4795-T1
Unique NameCAN33_4795-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:650344..650948+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4795-T1 ID=CAN33_4795-T1|Name=CAN33_4795-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=605bp|location=Sequence derived from alignment at NKJJ01000019.1:650344..650948+ (Aspergillus niger FDAARGOS_311)
ATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCG
CAAGGATGCGTCCTGTACGTTTACCCGACCTTTAGCCGCTTAGTTATCAT
GAGGTGGAAAGCTCCGCGGAGCTAGCTCTTTGAGGGGGAAGCTCGAGACG
GGTACCCGACTATCATCAAAAGGGCAAATTGGAATGGTTGATCGGGATGG
ATGAATGATAAGAAGTGGAGGCTAACGCGTGATGGTCTTGTCTTTCAAAC
AGCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGG
TCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAG
GCCGACAAGCTCAAGCAGAGCCTGCCCCTGGTGCGTTTGCTCCCGTCACC
TGATCGACTGTTTCTTTGGATGGTGTTATGGAACAAGATACATGTCGTCG
GACGCGTTTGTTTCCTTACGACTTGAGATGGGCATTGATGTGGACCTCGG
CTATTGCATGACATCATTCGGATTGAGTACTAACATCAATTGTTTTCTCA
CACAGCTCTCAAGGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCTC
TGTAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:650344..650948+

>CAN33_4795-T1 ID=CAN33_4795-T1|Name=CAN33_4795-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=702bp|location=Sequence derived from alignment at NKJJ01000019.1:650344..650948+ (Aspergillus niger FDAARGOS_311)
ATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCG
CAAGGATGCGTCCTCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGA
TCAAGTTCAAGGTCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAG
GACTCCGACAAGGCCGACAAGCTCAAGCAGAGCCTGCCCCTGGTTGTCGA
CGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAAATGCCTCAGGAAATCT
CCGACATCAAGCAGTTCATCGAGGTCTGCCGCCGCAAGGATGCGTCCTCT
GCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGGTCCG
CTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAGGCCG
ACAAGCTCAAGCAGAGCCTGCCCCTGGTTGTCGACGTCTCCAAGGGAGAC
AAGAAGAAGGCTCTGTAAATGCCTCAGGAAATCTCCGACATCAAGCAGTT
CATCGAGGTCTGCCGCCGCAAGGATGCGTCCTCTGCTCGCATCAAGCGCA
ACCCCAAGGACCAGCAGATCAAGTTCAAGGTCCGCTGCTCCCGCTTCGTC
TACACCCTTGTCCTGAAGGACTCCGACAAGGCCGACAAGCTCAAGCAGAG
CCTGCCCCTGGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL38CAN33_4795Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4795-T1.exon1CAN33_4795-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_4795-T1.exon2CAN33_4795-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4795-T1.exon3CAN33_4795-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4795-T1.cdsCAN33_4795-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4795-T1CAN33_4795-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265OQH
DBxrefInterPro:IPR002675
DBxrefInterPro:IPR038464
DBxrefPFAM:PF01781
Product60S ribosomal protein L38
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:650344..650948 +
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