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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3777877..3779284- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48180-T1 ID=CAN33_48180-T1|Name=CAN33_48180-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1408bp|location=Sequence derived from alignment at NKJJ01000022.1:3777877..3779284- (Aspergillus niger FDAARGOS_311)
ATGGGCCAAATAGAAGAACTCCCCGACGACTACGATGAGTCGCTCGAAGT
CAACAAGCAGCCTCAACCCCCCGCGACCGAATCCAAAGATGAATTCACCC
CACCTCCCCCGGAGGAGCTCCCCATTCCCATCAAGGAAGAGCGCCTCAAA
GACCTGAATGCGGGCGCGGACCCCATGGCGCCTCAAATGCCGCCTGCCAT
GGAGGCTGTGAGCACCCACACGACAGATGAGCTGGCGGAGATTCTGAATC
GCACGCCGCTGTTCATGACGGATATTAACAAGGCGTATGATGAGAGTTAG
TTTTCCTCTTTTAGTCTAGTCCTGGAAATATCTAGGTAGAATGTATGGGC
TAACAGGGTATGTGGGTAGAGGGCGAAAACCCCATGCTTGATGCGATCCG
CGCCCTCCAGAACGAAGGTACCCGCGGCGATGTCGCGCAGAATTTCCGTG
AACAAGGAAACGAAGCTGCTCGGGAGAAGCGCTGGGTTGACGCGAAGGAG
CATTACTCGAAGGGTATTGCCGTCTTGCTGGCCAAGGAGGATAAGTGGGA
TAAGCCTGAGGATGAGAAGGAGGAGGCCCGGTTGCGGAGGGAGGCCGAGG
AGGCGTGCTATATCAATCGCGCGCTGTGCCATTTGGAGTTGAGTATGTGT
TTTCTTGTCCTGAAGTGAGGAAAAGGTTGCTAACGTGGATAGAAAACTAC
CGATCTACGACCCTCGACTGCGCAGCCGTGCTGAAGCTGAACCCCAAGAA
CGTGAAAGCATACTATCGGTCCGCTATGGCGCTGTTTTCGCTAGATAAGA
TTATCGAGGCGGAGGATGTGGCGACCCGGGGATTGAAACTGGATCCGGCC
AACAAGGCTCTTCAAATGGTTGCTGGAAAGATCGGCGAGCGCAAGGCTGT
GATTGAGCGTATCGCGGCTAGAAAGAAGGCCGAGGATGAGCGCACACGCA
AGGAGAAGACGCTGCTTAGCGTTGCGCTGAAGGCGCGCCAGATCCGTACG
CGCAAGACGGATCAGCCTCCTGAGATGGAGGACGTGGGCATCAAACTTTC
GCCCGATCCGCTGTCGCCCGAGAGTACGCTTGAGTTCCCGGCTGTGTTCC
TGTACCATATGGATGCGCAGACGGATTTCATCAAGGCATTCTCCGAAATG
CATTCGATCGAGGATCATCTCGACTATATGTTCCCGTTGCCGTGGGATGA
GAAGGGAGAGTACAAGATCAATACGGTGGAGTGCTTCATGGAGACGGTTA
CCGGAGGTTTGATCCGCGCTGGCAAGAAGGTACCATTAGTACAGATTCTG
AGTGGAGGAAAGGTTGAGGTTGTGGATGAGTTGGTGAAGATTTACATCGT
GCCGACCAGCAAGAGCGCTAAGTTTATTGCTGAGATGAAGGCGCGCAAGG
AGGCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3777877..3779284- >CAN33_48180-T1 ID=CAN33_48180-T1|Name=CAN33_48180-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3852bp|location=Sequence derived from alignment at NKJJ01000022.1:3777877..3779284- (Aspergillus niger FDAARGOS_311)
AAAACTACCGATCTACGACCCTCGACTGCGCAGCCGTGCTGAAGCTGAAC
CCCAAGAACGTGAAAGCATACTATCGGTCCGCTATGGCGCTGTTTTCGCT
AGATAAGATTATCGAGGCGGAGGATGTGGCGACCCGGGGATTGAAACTGG
ATCCGGCCAACAAGGCTCTTCAAATGGTTGCTGGAAAGATCGGCGAGCGC
AAGGCTGTGATTGAGCGTATCGCGGCTAGAAAGAAGGCCGAGGATGAGCG
CACACGCAAGGAGAAGACGCTGCTTAGCGTTGCGCTGAAGGCGCGCCAGA
TCCGTACGCGCAAGACGGATCAGCCTCCTGAGATGGAGGACGTGGGCATC
AAACTTTCGCCCGATCCGCTGTCGCCCGAGAGTACGCTTGAGTTCCCGGC
TGTGTTCCTGTACCATATGGATGCGCAGACGGATTTCATCAAGGCATTCT
CCGAAATGCATTCGATCGAGGATCATCTCGACTATATGTTCCCGTTGCCG
TGGGATGAGAAGGGAGAGTACAAGATCAATACGGTGGAGTGCTTCATGGA
GACGGTTACCGGAGGTTTGATCCGCGCTGGCAAGAAGGTACCATTAGTAC
AGATTCTGAGTGGAGGAAAGGTTGAGGTTGTGGATGAGTTGGTGAAGATT
TACATCGTGCCGACCAGCAAGAGCGCTAAGTTTATTGCTGAGATGAAGGC
GCGCAAGGAGGCTTGAAGGGCGAAAACCCCATGCTTGATGCGATCCGCGC
CCTCCAGAACGAAGGTACCCGCGGCGATGTCGCGCAGAATTTCCGTGAAC
AAGGAAACGAAGCTGCTCGGGAGAAGCGCTGGGTTGACGCGAAGGAGCAT
TACTCGAAGGGTATTGCCGTCTTGCTGGCCAAGGAGGATAAGTGGGATAA
GCCTGAGGATGAGAAGGAGGAGGCCCGGTTGCGGAGGGAGGCCGAGGAGG
CGTGCTATATCAATCGCGCGCTGTGCCATTTGGAGTTGAATGGGCCAAAT
AGAAGAACTCCCCGACGACTACGATGAGTCGCTCGAAGTCAACAAGCAGC
CTCAACCCCCCGCGACCGAATCCAAAGATGAATTCACCCCACCTCCCCCG
GAGGAGCTCCCCATTCCCATCAAGGAAGAGCGCCTCAAAGACCTGAATGC
GGGCGCGGACCCCATGGCGCCTCAAATGCCGCCTGCCATGGAGGCTGTGA
GCACCCACACGACAGATGAGCTGGCGGAGATTCTGAATCGCACGCCGCTG
TTCATGACGGATATTAACAAGGCGTATGATGAGAAAAACTACCGATCTAC
GACCCTCGACTGCGCAGCCGTGCTGAAGCTGAACCCCAAGAACGTGAAAG
CATACTATCGGTCCGCTATGGCGCTGTTTTCGCTAGATAAGATTATCGAG
GCGGAGGATGTGGCGACCCGGGGATTGAAACTGGATCCGGCCAACAAGGC
TCTTCAAATGGTTGCTGGAAAGATCGGCGAGCGCAAGGCTGTGATTGAGC
GTATCGCGGCTAGAAAGAAGGCCGAGGATGAGCGCACACGCAAGGAGAAG
ACGCTGCTTAGCGTTGCGCTGAAGGCGCGCCAGATCCGTACGCGCAAGAC
GGATCAGCCTCCTGAGATGGAGGACGTGGGCATCAAACTTTCGCCCGATC
CGCTGTCGCCCGAGAGTACGCTTGAGTTCCCGGCTGTGTTCCTGTACCAT
ATGGATGCGCAGACGGATTTCATCAAGGCATTCTCCGAAATGCATTCGAT
CGAGGATCATCTCGACTATATGTTCCCGTTGCCGTGGGATGAGAAGGGAG
AGTACAAGATCAATACGGTGGAGTGCTTCATGGAGACGGTTACCGGAGGT
TTGATCCGCGCTGGCAAGAAGGTACCATTAGTACAGATTCTGAGTGGAGG
AAAGGTTGAGGTTGTGGATGAGTTGGTGAAGATTTACATCGTGCCGACCA
GCAAGAGCGCTAAGTTTATTGCTGAGATGAAGGCGCGCAAGGAGGCTTGA
AGGGCGAAAACCCCATGCTTGATGCGATCCGCGCCCTCCAGAACGAAGGT
ACCCGCGGCGATGTCGCGCAGAATTTCCGTGAACAAGGAAACGAAGCTGC
TCGGGAGAAGCGCTGGGTTGACGCGAAGGAGCATTACTCGAAGGGTATTG
CCGTCTTGCTGGCCAAGGAGGATAAGTGGGATAAGCCTGAGGATGAGAAG
GAGGAGGCCCGGTTGCGGAGGGAGGCCGAGGAGGCGTGCTATATCAATCG
CGCGCTGTGCCATTTGGAGTTGAATGGGCCAAATAGAAGAACTCCCCGAC
GACTACGATGAGTCGCTCGAAGTCAACAAGCAGCCTCAACCCCCCGCGAC
CGAATCCAAAGATGAATTCACCCCACCTCCCCCGGAGGAGCTCCCCATTC
CCATCAAGGAAGAGCGCCTCAAAGACCTGAATGCGGGCGCGGACCCCATG
GCGCCTCAAATGCCGCCTGCCATGGAGGCTGTGAGCACCCACACGACAGA
TGAGCTGGCGGAGATTCTGAATCGCACGCCGCTGTTCATGACGGATATTA
ACAAGGCGTATGATGAGAAAAACTACCGATCTACGACCCTCGACTGCGCA
GCCGTGCTGAAGCTGAACCCCAAGAACGTGAAAGCATACTATCGGTCCGC
TATGGCGCTGTTTTCGCTAGATAAGATTATCGAGGCGGAGGATGTGGCGA
CCCGGGGATTGAAACTGGATCCGGCCAACAAGGCTCTTCAAATGGTTGCT
GGAAAGATCGGCGAGCGCAAGGCTGTGATTGAGCGTATCGCGGCTAGAAA
GAAGGCCGAGGATGAGCGCACACGCAAGGAGAAGACGCTGCTTAGCGTTG
CGCTGAAGGCGCGCCAGATCCGTACGCGCAAGACGGATCAGCCTCCTGAG
ATGGAGGACGTGGGCATCAAACTTTCGCCCGATCCGCTGTCGCCCGAGAG
TACGCTTGAGTTCCCGGCTGTGTTCCTGTACCATATGGATGCGCAGACGG
ATTTCATCAAGGCATTCTCCGAAATGCATTCGATCGAGGATCATCTCGAC
TATATGTTCCCGTTGCCGTGGGATGAGAAGGGAGAGTACAAGATCAATAC
GGTGGAGTGCTTCATGGAGACGGTTACCGGAGGTTTGATCCGCGCTGGCA
AGAAGGTACCATTAGTACAGATTCTGAGTGGAGGAAAGGTTGAGGTTGTG
GATGAGTTGGTGAAGATTTACATCGTGCCGACCAGCAAGAGCGCTAAGTT
TATTGCTGAGATGAAGGCGCGCAAGGAGGCTTGAAGGGCGAAAACCCCAT
GCTTGATGCGATCCGCGCCCTCCAGAACGAAGGTACCCGCGGCGATGTCG
CGCAGAATTTCCGTGAACAAGGAAACGAAGCTGCTCGGGAGAAGCGCTGG
GTTGACGCGAAGGAGCATTACTCGAAGGGTATTGCCGTCTTGCTGGCCAA
GGAGGATAAGTGGGATAAGCCTGAGGATGAGAAGGAGGAGGCCCGGTTGC
GGAGGGAGGCCGAGGAGGCGTGCTATATCAATCGCGCGCTGTGCCATTTG
GAGTTGAATGGGCCAAATAGAAGAACTCCCCGACGACTACGATGAGTCGC
TCGAAGTCAACAAGCAGCCTCAACCCCCCGCGACCGAATCCAAAGATGAA
TTCACCCCACCTCCCCCGGAGGAGCTCCCCATTCCCATCAAGGAAGAGCG
CCTCAAAGACCTGAATGCGGGCGCGGACCCCATGGCGCCTCAAATGCCGC
CTGCCATGGAGGCTGTGAGCACCCACACGACAGATGAGCTGGCGGAGATT
CTGAATCGCACGCCGCTGTTCATGACGGATATTAACAAGGCGTATGATGA
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR019734 |
| Product | TPR repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3777877..3779284 - |
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