You are here

Home

CAN33_48390-T1, CAN33_48390-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_48390-T1
Unique NameCAN33_48390-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3910693..3911319-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_48390-T1 ID=CAN33_48390-T1|Name=CAN33_48390-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=627bp|location=Sequence derived from alignment at NKJJ01000022.1:3910693..3911319- (Aspergillus niger FDAARGOS_311)
ATGCCTCCCTCTTCTTGGCCAGACAGTGCAAAAGCTGCAGTGAGCATCAC
ATTTGATAATGTGGGTGAATCAAGAGACGTCGGAGTAGGAGCATGGCCGA
AGGAGAAACCCGTGGGACAGCATCCGTCGGTACTGGAGGTGACCCCAATT
ATTCTCGACATTCTTGACAAGCACGACGTGAAAGTGACATATTTCATGGA
AGCATGGGGTATTCAGACGTACCCAAAGATGCTCAGCGAGGTCCAGAGTC
GTGGCCATGAAATTGGATATCACGCATATCAGCACGAGGAGTGGAAAACG
CTGTCACCCCTACAAGAAGAAGAAATCATAAACAAGAGCCTCCCAATAGC
GCAGGAGCTTGGTGTCTGTTACAAAGGCTTCCGCCCTCCCGGCGGATCGA
TGAACGCCGGTACCAAGGATTTGCTCCGTCGTCACGGAATCAAGTATGCT
TCAATTCTGGGCCAAGATATCAGCACGGACAAAGATGGCTTCGTGACTCT
ACCGTTTCAATGGAGGGCTGTCGATGCGTTCTACATCCTAGATGCATTCG
ACTTTCTTAGAGCTGAATACGGAGAGCAAGGATCTATCTTCACTTGCGAA
GCTTTCCAGCAGGCGCTCTTTGACTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:3910693..3911319-

>CAN33_48390-T1 ID=CAN33_48390-T1|Name=CAN33_48390-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=627bp|location=Sequence derived from alignment at NKJJ01000022.1:3910693..3911319- (Aspergillus niger FDAARGOS_311)
ATGCCTCCCTCTTCTTGGCCAGACAGTGCAAAAGCTGCAGTGAGCATCAC
ATTTGATAATGTGGGTGAATCAAGAGACGTCGGAGTAGGAGCATGGCCGA
AGGAGAAACCCGTGGGACAGCATCCGTCGGTACTGGAGGTGACCCCAATT
ATTCTCGACATTCTTGACAAGCACGACGTGAAAGTGACATATTTCATGGA
AGCATGGGGTATTCAGACGTACCCAAAGATGCTCAGCGAGGTCCAGAGTC
GTGGCCATGAAATTGGATATCACGCATATCAGCACGAGGAGTGGAAAACG
CTGTCACCCCTACAAGAAGAAGAAATCATAAACAAGAGCCTCCCAATAGC
GCAGGAGCTTGGTGTCTGTTACAAAGGCTTCCGCCCTCCCGGCGGATCGA
TGAACGCCGGTACCAAGGATTTGCTCCGTCGTCACGGAATCAAGTATGCT
TCAATTCTGGGCCAAGATATCAGCACGGACAAAGATGGCTTCGTGACTCT
ACCGTTTCAATGGAGGGCTGTCGATGCGTTCTACATCCTAGATGCATTCG
ACTTTCTTAGAGCTGAATACGGAGAGCAAGGATCTATCTTCACTTGCGAA
GCTTTCCAGCAGGCGCTCTTTGACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_48390CAN33_48390Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48390-T1.cdsCAN33_48390-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48390-T1.exon1CAN33_48390-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48390-T1CAN33_48390-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000221.10
NoteEggNog:ENOG41
NoteCAZy:CE4
DBxrefInterPro:IPR011330
DBxrefInterPro:IPR002509
DBxrefPFAM:PF01522
ProductPolysaccharide deacetylase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3910693..3911319 -
Powered by Drupal