You are here

Home

CAN33_48420-T1, CAN33_48420-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_48420-T1
Unique NameCAN33_48420-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:3923803..3925454+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_48420-T1 ID=CAN33_48420-T1|Name=CAN33_48420-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1652bp|location=Sequence derived from alignment at NKJJ01000022.1:3923803..3925454+ (Aspergillus niger FDAARGOS_311)
ATGGTCGCCCTTGGTATCGGGTATCTCATTTACTACATCTCAATCCCATT
CTGCTCGTTCCGTTACTATCATCGTCAGTGGCTGGATATGATGGTAAGTC
TATGGATCTGCATTTGGGATGGAACTCTCTCACGCTTTCTTTTTGCTGGT
AGGCTCTCTTATGAATGCTCTACAGTCCATCGCTGAGTGGAACGACTATT
TCGGCAACCCCTCTGGCTCGGTTTTGGGAGTTGTAAATGCGGCCCAGTCT
ATCGGGAGCGTCATCTCGTTGCCCTTTGTCGCTGTCTTGTCGGACAGAAT
TGGAAGACGCCTAACCTTGCTTTCCGGTGCAATCGTGATCATCATCGCCT
CTATTATTCAAGCAGCGTCAGTTCATTATGGCATGTTTGTATTTTCACGT
GTGTTGGTTGGCGTCGGCTCGATGCTGGTCGTGCAGCCGTCGCCCATGTT
GATCACTGAACTGGCGTATCCAACTCACCGAGGGAAGTACACCAGCGCCT
TCTGGACCATGTACTATCTTGGAGCTATTCTGGCCTCATGGGCCTCATAT
GGAACTCAAATGCACCTCAATAAATCCAGTTGGAGCTGGAGAGTTCCATC
AATACTTCAAGCTGGATTTCCGATCGTTCAGGTTCTCTTCTGGTGGGCTG
TTCCGGAGTCACCACGGTTGTTCTCCCTCAACCCTTGACTTTCGCGTACT
AACAGCTATATAGGTGGTTAATCGCCAATGGACAGCCGGAAGAGGCTGAA
GAATTACTTGCCCGATTCTATACTGCCGGGGACACTTCGCACCCTCTGAT
ACAATTCGAAATGGCTGAGATCGGGCGTACTATCGAAATGGAGAGTCAAG
CCGCGGAGACCAAATGGACAACGTTGGTTAAGACTCCTGGAAACCGCAAG
CGCACATTTATCGCAGTCAGCATTGGTGCCTTTGCACAATGGAACGTAAG
TATATCTAGACCTCATTTCCCTTTGGCAGGAAAATTAACCACTTAATACA
GGGCGTTGCGGTCGTATCTTACTATCTCACACTCGTTCTCGACACGGTCG
GTATCAAAGATCCAAGCACTCAGACAATGATCAATGGCCTGCTGCAAGTA
TTTAACTTCATTGCAGCTGGCAGTGCTGCTATGTTGGTTGACCGATTGGG
TCGTCGTACCCTGTTTCTTTGGTCGGCTTCGGGAATGCTCCTTTCCTTCA
TAATATGGACTGCCTGCTCAGCTGTCTTTGACAGCACTCAGGGCAAGCCC
CTTGGTAATACGGTGATTGCATTTGTCTTCATTTTCTTCTTCCATTACGA
CATCGCCTATACACCGTTGCTATTGGGCTATCCAACTGAGATCTTTCCGT
ATTCCATACGAAGCAAGGGACTGACTGTTGAGCTATTAAGTGTATACGGC
TCCCTTATTATACTGGCATTCGTCAACCCGATTGCTCTCGATAGTATCGG
CTGGCATTACTACATCTTTTTCTGTTGTTTTGATGTAGTGGTATTGGCAG
TAACTTGGCTCGCCTTTCCCGAGACGAAGAGCCATTCACTTGAAGAGATT
GCCGAAGTATTTGACGGGCCATTACCTGCTACGAGCGGGATTGTTTTTGC
CAAGGATGACGATGCGGTTGGGAAATGTGAACATACTGAGCATGCGGCAT
AA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:3923803..3925454+

>CAN33_48420-T1 ID=CAN33_48420-T1|Name=CAN33_48420-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5772bp|location=Sequence derived from alignment at NKJJ01000022.1:3923803..3925454+ (Aspergillus niger FDAARGOS_311)
ATGGTCGCCCTTGGTATCGGGTATCTCATTTACTACATCTCAATCCCATT
CTGCTCGTTCCGTTACTATCATCGTCAGTGGCTGGATATGATGTCCATCG
CTGAGTGGAACGACTATTTCGGCAACCCCTCTGGCTCGGTTTTGGGAGTT
GTAAATGCGGCCCAGTCTATCGGGAGCGTCATCTCGTTGCCCTTTGTCGC
TGTCTTGTCGGACAGAATTGGAAGACGCCTAACCTTGCTTTCCGGTGCAA
TCGTGATCATCATCGCCTCTATTATTCAAGCAGCGTCAGTTCATTATGGC
ATGTTTGTATTTTCACGTGTGTTGGTTGGCGTCGGCTCGATGCTGGTCGT
GCAGCCGTCGCCCATGTTGATCACTGAACTGGCGTATCCAACTCACCGAG
GGAAGTACACCAGCGCCTTCTGGACCATGTACTATCTTGGAGCTATTCTG
GCCTCATGGGCCTCATATGGAACTCAAATGCACCTCAATAAATCCAGTTG
GAGCTGGAGAGTTCCATCAATACTTCAAGCTGGATTTCCGATCGTTCAGG
TTCTCTTCTGGTGGTTAATCGCCAATGGACAGCCGGAAGAGGCTGAAGAA
TTACTTGCCCGATTCTATACTGCCGGGGACACTTCGCACCCTCTGATACA
ATTCGAAATGGCTGAGATCGGGCGTACTATCGAAATGGAGAGTCAAGCCG
CGGAGACCAAATGGACAACGTTGGTTAAGACTCCTGGAAACCGCAAGCGC
ACATTTATCGCAGTCAGCATTGGTGCCTTTGCACAATGGAACGGCGTTGC
GGTCGTATCTTACTATCTCACACTCGTTCTCGACACGGTCGGTATCAAAG
ATCCAAGCACTCAGACAATGATCAATGGCCTGCTGCAAGTATTTAACTTC
ATTGCAGCTGGCAGTGCTGCTATGTTGGTTGACCGATTGGGTCGTCGTAC
CCTGTTTCTTTGGTCGGCTTCGGGAATGCTCCTTTCCTTCATAATATGGA
CTGCCTGCTCAGCTGTCTTTGACAGCACTCAGGGCAAGCCCCTTGGTAAT
ACGGTGATTGCATTTGTCTTCATTTTCTTCTTCCATTACGACATCGCCTA
TACACCGTTGCTATTGGGCTATCCAACTGAGATCTTTCCGTATTCCATAC
GAAGCAAGGGACTGACTGTTGAGCTATTAAGTGTATACGGCTCCCTTATT
ATACTGGCATTCGTCAACCCGATTGCTCTCGATAGTATCGGCTGGCATTA
CTACATCTTTTTCTGTTGTTTTGATGTAGTGGTATTGGCAGTAACTTGGC
TCGCCTTTCCCGAGACGAAGAGCCATTCACTTGAAGAGATTGCCGAAGTA
TTTGACGGGCCATTACCTGCTACGAGCGGGATTGTTTTTGCCAAGGATGA
CGATGCGGTTGGGAAATGTGAACATACTGAGCATGCGGCATAAATGGTCG
CCCTTGGTATCGGGTATCTCATTTACTACATCTCAATCCCATTCTGCTCG
TTCCGTTACTATCATCGTCAGTGGCTGGATATGATGTCCATCGCTGAGTG
GAACGACTATTTCGGCAACCCCTCTGGCTCGGTTTTGGGAGTTGTAAATG
CGGCCCAGTCTATCGGGAGCGTCATCTCGTTGCCCTTTGTCGCTGTCTTG
TCGGACAGAATTGGAAGACGCCTAACCTTGCTTTCCGGTGCAATCGTGAT
CATCATCGCCTCTATTATTCAAGCAGCGTCAGTTCATTATGGCATGTTTG
TATTTTCACGTGTGTTGGTTGGCGTCGGCTCGATGCTGGTCGTGCAGCCG
TCGCCCATGTTGATCACTGAACTGGCGTATCCAACTCACCGAGGGAAGTA
CACCAGCGCCTTCTGGACCATGTACTATCTTGGAGCTATTCTGGCCTCAT
GGGCCTCATATGGAACTCAAATGCACCTCAATAAATCCAGTTGGAGCTGG
AGAGTTCCATCAATACTTCAAGCTGGATTTCCGATCGTTCAGGTTCTCTT
CTGGTGGTTAATCGCCAATGGACAGCCGGAAGAGGCTGAAGAATTACTTG
CCCGATTCTATACTGCCGGGGACACTTCGCACCCTCTGATACAATTCGAA
ATGGCTGAGATCGGGCGTACTATCGAAATGGAGAGTCAAGCCGCGGAGAC
CAAATGGACAACGTTGGTTAAGACTCCTGGAAACCGCAAGCGCACATTTA
TCGCAGTCAGCATTGGTGCCTTTGCACAATGGAACGGCGTTGCGGTCGTA
TCTTACTATCTCACACTCGTTCTCGACACGGTCGGTATCAAAGATCCAAG
CACTCAGACAATGATCAATGGCCTGCTGCAAGTATTTAACTTCATTGCAG
CTGGCAGTGCTGCTATGTTGGTTGACCGATTGGGTCGTCGTACCCTGTTT
CTTTGGTCGGCTTCGGGAATGCTCCTTTCCTTCATAATATGGACTGCCTG
CTCAGCTGTCTTTGACAGCACTCAGGGCAAGCCCCTTGGTAATACGGTGA
TTGCATTTGTCTTCATTTTCTTCTTCCATTACGACATCGCCTATACACCG
TTGCTATTGGGCTATCCAACTGAGATCTTTCCGTATTCCATACGAAGCAA
GGGACTGACTGTTGAGCTATTAAGTGTATACGGCTCCCTTATTATACTGG
CATTCGTCAACCCGATTGCTCTCGATAGTATCGGCTGGCATTACTACATC
TTTTTCTGTTGTTTTGATGTAGTGGTATTGGCAGTAACTTGGCTCGCCTT
TCCCGAGACGAAGAGCCATTCACTTGAAGAGATTGCCGAAGTATTTGACG
GGCCATTACCTGCTACGAGCGGGATTGTTTTTGCCAAGGATGACGATGCG
GTTGGGAAATGTGAACATACTGAGCATGCGGCATAAATGGTCGCCCTTGG
TATCGGGTATCTCATTTACTACATCTCAATCCCATTCTGCTCGTTCCGTT
ACTATCATCGTCAGTGGCTGGATATGATGTCCATCGCTGAGTGGAACGAC
TATTTCGGCAACCCCTCTGGCTCGGTTTTGGGAGTTGTAAATGCGGCCCA
GTCTATCGGGAGCGTCATCTCGTTGCCCTTTGTCGCTGTCTTGTCGGACA
GAATTGGAAGACGCCTAACCTTGCTTTCCGGTGCAATCGTGATCATCATC
GCCTCTATTATTCAAGCAGCGTCAGTTCATTATGGCATGTTTGTATTTTC
ACGTGTGTTGGTTGGCGTCGGCTCGATGCTGGTCGTGCAGCCGTCGCCCA
TGTTGATCACTGAACTGGCGTATCCAACTCACCGAGGGAAGTACACCAGC
GCCTTCTGGACCATGTACTATCTTGGAGCTATTCTGGCCTCATGGGCCTC
ATATGGAACTCAAATGCACCTCAATAAATCCAGTTGGAGCTGGAGAGTTC
CATCAATACTTCAAGCTGGATTTCCGATCGTTCAGGTTCTCTTCTGGTGG
TTAATCGCCAATGGACAGCCGGAAGAGGCTGAAGAATTACTTGCCCGATT
CTATACTGCCGGGGACACTTCGCACCCTCTGATACAATTCGAAATGGCTG
AGATCGGGCGTACTATCGAAATGGAGAGTCAAGCCGCGGAGACCAAATGG
ACAACGTTGGTTAAGACTCCTGGAAACCGCAAGCGCACATTTATCGCAGT
CAGCATTGGTGCCTTTGCACAATGGAACGGCGTTGCGGTCGTATCTTACT
ATCTCACACTCGTTCTCGACACGGTCGGTATCAAAGATCCAAGCACTCAG
ACAATGATCAATGGCCTGCTGCAAGTATTTAACTTCATTGCAGCTGGCAG
TGCTGCTATGTTGGTTGACCGATTGGGTCGTCGTACCCTGTTTCTTTGGT
CGGCTTCGGGAATGCTCCTTTCCTTCATAATATGGACTGCCTGCTCAGCT
GTCTTTGACAGCACTCAGGGCAAGCCCCTTGGTAATACGGTGATTGCATT
TGTCTTCATTTTCTTCTTCCATTACGACATCGCCTATACACCGTTGCTAT
TGGGCTATCCAACTGAGATCTTTCCGTATTCCATACGAAGCAAGGGACTG
ACTGTTGAGCTATTAAGTGTATACGGCTCCCTTATTATACTGGCATTCGT
CAACCCGATTGCTCTCGATAGTATCGGCTGGCATTACTACATCTTTTTCT
GTTGTTTTGATGTAGTGGTATTGGCAGTAACTTGGCTCGCCTTTCCCGAG
ACGAAGAGCCATTCACTTGAAGAGATTGCCGAAGTATTTGACGGGCCATT
ACCTGCTACGAGCGGGATTGTTTTTGCCAAGGATGACGATGCGGTTGGGA
AATGTGAACATACTGAGCATGCGGCATAAATGGTCGCCCTTGGTATCGGG
TATCTCATTTACTACATCTCAATCCCATTCTGCTCGTTCCGTTACTATCA
TCGTCAGTGGCTGGATATGATGTCCATCGCTGAGTGGAACGACTATTTCG
GCAACCCCTCTGGCTCGGTTTTGGGAGTTGTAAATGCGGCCCAGTCTATC
GGGAGCGTCATCTCGTTGCCCTTTGTCGCTGTCTTGTCGGACAGAATTGG
AAGACGCCTAACCTTGCTTTCCGGTGCAATCGTGATCATCATCGCCTCTA
TTATTCAAGCAGCGTCAGTTCATTATGGCATGTTTGTATTTTCACGTGTG
TTGGTTGGCGTCGGCTCGATGCTGGTCGTGCAGCCGTCGCCCATGTTGAT
CACTGAACTGGCGTATCCAACTCACCGAGGGAAGTACACCAGCGCCTTCT
GGACCATGTACTATCTTGGAGCTATTCTGGCCTCATGGGCCTCATATGGA
ACTCAAATGCACCTCAATAAATCCAGTTGGAGCTGGAGAGTTCCATCAAT
ACTTCAAGCTGGATTTCCGATCGTTCAGGTTCTCTTCTGGTGGTTAATCG
CCAATGGACAGCCGGAAGAGGCTGAAGAATTACTTGCCCGATTCTATACT
GCCGGGGACACTTCGCACCCTCTGATACAATTCGAAATGGCTGAGATCGG
GCGTACTATCGAAATGGAGAGTCAAGCCGCGGAGACCAAATGGACAACGT
TGGTTAAGACTCCTGGAAACCGCAAGCGCACATTTATCGCAGTCAGCATT
GGTGCCTTTGCACAATGGAACGGCGTTGCGGTCGTATCTTACTATCTCAC
ACTCGTTCTCGACACGGTCGGTATCAAAGATCCAAGCACTCAGACAATGA
TCAATGGCCTGCTGCAAGTATTTAACTTCATTGCAGCTGGCAGTGCTGCT
ATGTTGGTTGACCGATTGGGTCGTCGTACCCTGTTTCTTTGGTCGGCTTC
GGGAATGCTCCTTTCCTTCATAATATGGACTGCCTGCTCAGCTGTCTTTG
ACAGCACTCAGGGCAAGCCCCTTGGTAATACGGTGATTGCATTTGTCTTC
ATTTTCTTCTTCCATTACGACATCGCCTATACACCGTTGCTATTGGGCTA
TCCAACTGAGATCTTTCCGTATTCCATACGAAGCAAGGGACTGACTGTTG
AGCTATTAAGTGTATACGGCTCCCTTATTATACTGGCATTCGTCAACCCG
ATTGCTCTCGATAGTATCGGCTGGCATTACTACATCTTTTTCTGTTGTTT
TGATGTAGTGGTATTGGCAGTAACTTGGCTCGCCTTTCCCGAGACGAAGA
GCCATTCACTTGAAGAGATTGCCGAAGTATTTGACGGGCCATTACCTGCT
ACGAGCGGGATTGTTTTTGCCAAGGATGACGATGCGGTTGGGAAATGTGA
ACATACTGAGCATGCGGCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_48420CAN33_48420Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48420-T1.exon1CAN33_48420-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_48420-T1.exon2CAN33_48420-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_48420-T1.exon3CAN33_48420-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_48420-T1.exon4CAN33_48420-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48420-T1.cdsCAN33_48420-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48420-T1CAN33_48420-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000221.10
NoteEggNog:ENOG41
NoteSMCOG1169:sugar transport protein
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
ProductSugar (and other) transporter family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:3923803..3925454 +
Powered by Drupal