|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3923803..3925454+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48420-T1 ID=CAN33_48420-T1|Name=CAN33_48420-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1652bp|location=Sequence derived from alignment at NKJJ01000022.1:3923803..3925454+ (Aspergillus niger FDAARGOS_311)
ATGGTCGCCCTTGGTATCGGGTATCTCATTTACTACATCTCAATCCCATT
CTGCTCGTTCCGTTACTATCATCGTCAGTGGCTGGATATGATGGTAAGTC
TATGGATCTGCATTTGGGATGGAACTCTCTCACGCTTTCTTTTTGCTGGT
AGGCTCTCTTATGAATGCTCTACAGTCCATCGCTGAGTGGAACGACTATT
TCGGCAACCCCTCTGGCTCGGTTTTGGGAGTTGTAAATGCGGCCCAGTCT
ATCGGGAGCGTCATCTCGTTGCCCTTTGTCGCTGTCTTGTCGGACAGAAT
TGGAAGACGCCTAACCTTGCTTTCCGGTGCAATCGTGATCATCATCGCCT
CTATTATTCAAGCAGCGTCAGTTCATTATGGCATGTTTGTATTTTCACGT
GTGTTGGTTGGCGTCGGCTCGATGCTGGTCGTGCAGCCGTCGCCCATGTT
GATCACTGAACTGGCGTATCCAACTCACCGAGGGAAGTACACCAGCGCCT
TCTGGACCATGTACTATCTTGGAGCTATTCTGGCCTCATGGGCCTCATAT
GGAACTCAAATGCACCTCAATAAATCCAGTTGGAGCTGGAGAGTTCCATC
AATACTTCAAGCTGGATTTCCGATCGTTCAGGTTCTCTTCTGGTGGGCTG
TTCCGGAGTCACCACGGTTGTTCTCCCTCAACCCTTGACTTTCGCGTACT
AACAGCTATATAGGTGGTTAATCGCCAATGGACAGCCGGAAGAGGCTGAA
GAATTACTTGCCCGATTCTATACTGCCGGGGACACTTCGCACCCTCTGAT
ACAATTCGAAATGGCTGAGATCGGGCGTACTATCGAAATGGAGAGTCAAG
CCGCGGAGACCAAATGGACAACGTTGGTTAAGACTCCTGGAAACCGCAAG
CGCACATTTATCGCAGTCAGCATTGGTGCCTTTGCACAATGGAACGTAAG
TATATCTAGACCTCATTTCCCTTTGGCAGGAAAATTAACCACTTAATACA
GGGCGTTGCGGTCGTATCTTACTATCTCACACTCGTTCTCGACACGGTCG
GTATCAAAGATCCAAGCACTCAGACAATGATCAATGGCCTGCTGCAAGTA
TTTAACTTCATTGCAGCTGGCAGTGCTGCTATGTTGGTTGACCGATTGGG
TCGTCGTACCCTGTTTCTTTGGTCGGCTTCGGGAATGCTCCTTTCCTTCA
TAATATGGACTGCCTGCTCAGCTGTCTTTGACAGCACTCAGGGCAAGCCC
CTTGGTAATACGGTGATTGCATTTGTCTTCATTTTCTTCTTCCATTACGA
CATCGCCTATACACCGTTGCTATTGGGCTATCCAACTGAGATCTTTCCGT
ATTCCATACGAAGCAAGGGACTGACTGTTGAGCTATTAAGTGTATACGGC
TCCCTTATTATACTGGCATTCGTCAACCCGATTGCTCTCGATAGTATCGG
CTGGCATTACTACATCTTTTTCTGTTGTTTTGATGTAGTGGTATTGGCAG
TAACTTGGCTCGCCTTTCCCGAGACGAAGAGCCATTCACTTGAAGAGATT
GCCGAAGTATTTGACGGGCCATTACCTGCTACGAGCGGGATTGTTTTTGC
CAAGGATGACGATGCGGTTGGGAAATGTGAACATACTGAGCATGCGGCAT
AA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3923803..3925454+ >CAN33_48420-T1 ID=CAN33_48420-T1|Name=CAN33_48420-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5772bp|location=Sequence derived from alignment at NKJJ01000022.1:3923803..3925454+ (Aspergillus niger FDAARGOS_311)
ATGGTCGCCCTTGGTATCGGGTATCTCATTTACTACATCTCAATCCCATT
CTGCTCGTTCCGTTACTATCATCGTCAGTGGCTGGATATGATGTCCATCG
CTGAGTGGAACGACTATTTCGGCAACCCCTCTGGCTCGGTTTTGGGAGTT
GTAAATGCGGCCCAGTCTATCGGGAGCGTCATCTCGTTGCCCTTTGTCGC
TGTCTTGTCGGACAGAATTGGAAGACGCCTAACCTTGCTTTCCGGTGCAA
TCGTGATCATCATCGCCTCTATTATTCAAGCAGCGTCAGTTCATTATGGC
ATGTTTGTATTTTCACGTGTGTTGGTTGGCGTCGGCTCGATGCTGGTCGT
GCAGCCGTCGCCCATGTTGATCACTGAACTGGCGTATCCAACTCACCGAG
GGAAGTACACCAGCGCCTTCTGGACCATGTACTATCTTGGAGCTATTCTG
GCCTCATGGGCCTCATATGGAACTCAAATGCACCTCAATAAATCCAGTTG
GAGCTGGAGAGTTCCATCAATACTTCAAGCTGGATTTCCGATCGTTCAGG
TTCTCTTCTGGTGGTTAATCGCCAATGGACAGCCGGAAGAGGCTGAAGAA
TTACTTGCCCGATTCTATACTGCCGGGGACACTTCGCACCCTCTGATACA
ATTCGAAATGGCTGAGATCGGGCGTACTATCGAAATGGAGAGTCAAGCCG
CGGAGACCAAATGGACAACGTTGGTTAAGACTCCTGGAAACCGCAAGCGC
ACATTTATCGCAGTCAGCATTGGTGCCTTTGCACAATGGAACGGCGTTGC
GGTCGTATCTTACTATCTCACACTCGTTCTCGACACGGTCGGTATCAAAG
ATCCAAGCACTCAGACAATGATCAATGGCCTGCTGCAAGTATTTAACTTC
ATTGCAGCTGGCAGTGCTGCTATGTTGGTTGACCGATTGGGTCGTCGTAC
CCTGTTTCTTTGGTCGGCTTCGGGAATGCTCCTTTCCTTCATAATATGGA
CTGCCTGCTCAGCTGTCTTTGACAGCACTCAGGGCAAGCCCCTTGGTAAT
ACGGTGATTGCATTTGTCTTCATTTTCTTCTTCCATTACGACATCGCCTA
TACACCGTTGCTATTGGGCTATCCAACTGAGATCTTTCCGTATTCCATAC
GAAGCAAGGGACTGACTGTTGAGCTATTAAGTGTATACGGCTCCCTTATT
ATACTGGCATTCGTCAACCCGATTGCTCTCGATAGTATCGGCTGGCATTA
CTACATCTTTTTCTGTTGTTTTGATGTAGTGGTATTGGCAGTAACTTGGC
TCGCCTTTCCCGAGACGAAGAGCCATTCACTTGAAGAGATTGCCGAAGTA
TTTGACGGGCCATTACCTGCTACGAGCGGGATTGTTTTTGCCAAGGATGA
CGATGCGGTTGGGAAATGTGAACATACTGAGCATGCGGCATAAATGGTCG
CCCTTGGTATCGGGTATCTCATTTACTACATCTCAATCCCATTCTGCTCG
TTCCGTTACTATCATCGTCAGTGGCTGGATATGATGTCCATCGCTGAGTG
GAACGACTATTTCGGCAACCCCTCTGGCTCGGTTTTGGGAGTTGTAAATG
CGGCCCAGTCTATCGGGAGCGTCATCTCGTTGCCCTTTGTCGCTGTCTTG
TCGGACAGAATTGGAAGACGCCTAACCTTGCTTTCCGGTGCAATCGTGAT
CATCATCGCCTCTATTATTCAAGCAGCGTCAGTTCATTATGGCATGTTTG
TATTTTCACGTGTGTTGGTTGGCGTCGGCTCGATGCTGGTCGTGCAGCCG
TCGCCCATGTTGATCACTGAACTGGCGTATCCAACTCACCGAGGGAAGTA
CACCAGCGCCTTCTGGACCATGTACTATCTTGGAGCTATTCTGGCCTCAT
GGGCCTCATATGGAACTCAAATGCACCTCAATAAATCCAGTTGGAGCTGG
AGAGTTCCATCAATACTTCAAGCTGGATTTCCGATCGTTCAGGTTCTCTT
CTGGTGGTTAATCGCCAATGGACAGCCGGAAGAGGCTGAAGAATTACTTG
CCCGATTCTATACTGCCGGGGACACTTCGCACCCTCTGATACAATTCGAA
ATGGCTGAGATCGGGCGTACTATCGAAATGGAGAGTCAAGCCGCGGAGAC
CAAATGGACAACGTTGGTTAAGACTCCTGGAAACCGCAAGCGCACATTTA
TCGCAGTCAGCATTGGTGCCTTTGCACAATGGAACGGCGTTGCGGTCGTA
TCTTACTATCTCACACTCGTTCTCGACACGGTCGGTATCAAAGATCCAAG
CACTCAGACAATGATCAATGGCCTGCTGCAAGTATTTAACTTCATTGCAG
CTGGCAGTGCTGCTATGTTGGTTGACCGATTGGGTCGTCGTACCCTGTTT
CTTTGGTCGGCTTCGGGAATGCTCCTTTCCTTCATAATATGGACTGCCTG
CTCAGCTGTCTTTGACAGCACTCAGGGCAAGCCCCTTGGTAATACGGTGA
TTGCATTTGTCTTCATTTTCTTCTTCCATTACGACATCGCCTATACACCG
TTGCTATTGGGCTATCCAACTGAGATCTTTCCGTATTCCATACGAAGCAA
GGGACTGACTGTTGAGCTATTAAGTGTATACGGCTCCCTTATTATACTGG
CATTCGTCAACCCGATTGCTCTCGATAGTATCGGCTGGCATTACTACATC
TTTTTCTGTTGTTTTGATGTAGTGGTATTGGCAGTAACTTGGCTCGCCTT
TCCCGAGACGAAGAGCCATTCACTTGAAGAGATTGCCGAAGTATTTGACG
GGCCATTACCTGCTACGAGCGGGATTGTTTTTGCCAAGGATGACGATGCG
GTTGGGAAATGTGAACATACTGAGCATGCGGCATAAATGGTCGCCCTTGG
TATCGGGTATCTCATTTACTACATCTCAATCCCATTCTGCTCGTTCCGTT
ACTATCATCGTCAGTGGCTGGATATGATGTCCATCGCTGAGTGGAACGAC
TATTTCGGCAACCCCTCTGGCTCGGTTTTGGGAGTTGTAAATGCGGCCCA
GTCTATCGGGAGCGTCATCTCGTTGCCCTTTGTCGCTGTCTTGTCGGACA
GAATTGGAAGACGCCTAACCTTGCTTTCCGGTGCAATCGTGATCATCATC
GCCTCTATTATTCAAGCAGCGTCAGTTCATTATGGCATGTTTGTATTTTC
ACGTGTGTTGGTTGGCGTCGGCTCGATGCTGGTCGTGCAGCCGTCGCCCA
TGTTGATCACTGAACTGGCGTATCCAACTCACCGAGGGAAGTACACCAGC
GCCTTCTGGACCATGTACTATCTTGGAGCTATTCTGGCCTCATGGGCCTC
ATATGGAACTCAAATGCACCTCAATAAATCCAGTTGGAGCTGGAGAGTTC
CATCAATACTTCAAGCTGGATTTCCGATCGTTCAGGTTCTCTTCTGGTGG
TTAATCGCCAATGGACAGCCGGAAGAGGCTGAAGAATTACTTGCCCGATT
CTATACTGCCGGGGACACTTCGCACCCTCTGATACAATTCGAAATGGCTG
AGATCGGGCGTACTATCGAAATGGAGAGTCAAGCCGCGGAGACCAAATGG
ACAACGTTGGTTAAGACTCCTGGAAACCGCAAGCGCACATTTATCGCAGT
CAGCATTGGTGCCTTTGCACAATGGAACGGCGTTGCGGTCGTATCTTACT
ATCTCACACTCGTTCTCGACACGGTCGGTATCAAAGATCCAAGCACTCAG
ACAATGATCAATGGCCTGCTGCAAGTATTTAACTTCATTGCAGCTGGCAG
TGCTGCTATGTTGGTTGACCGATTGGGTCGTCGTACCCTGTTTCTTTGGT
CGGCTTCGGGAATGCTCCTTTCCTTCATAATATGGACTGCCTGCTCAGCT
GTCTTTGACAGCACTCAGGGCAAGCCCCTTGGTAATACGGTGATTGCATT
TGTCTTCATTTTCTTCTTCCATTACGACATCGCCTATACACCGTTGCTAT
TGGGCTATCCAACTGAGATCTTTCCGTATTCCATACGAAGCAAGGGACTG
ACTGTTGAGCTATTAAGTGTATACGGCTCCCTTATTATACTGGCATTCGT
CAACCCGATTGCTCTCGATAGTATCGGCTGGCATTACTACATCTTTTTCT
GTTGTTTTGATGTAGTGGTATTGGCAGTAACTTGGCTCGCCTTTCCCGAG
ACGAAGAGCCATTCACTTGAAGAGATTGCCGAAGTATTTGACGGGCCATT
ACCTGCTACGAGCGGGATTGTTTTTGCCAAGGATGACGATGCGGTTGGGA
AATGTGAACATACTGAGCATGCGGCATAAATGGTCGCCCTTGGTATCGGG
TATCTCATTTACTACATCTCAATCCCATTCTGCTCGTTCCGTTACTATCA
TCGTCAGTGGCTGGATATGATGTCCATCGCTGAGTGGAACGACTATTTCG
GCAACCCCTCTGGCTCGGTTTTGGGAGTTGTAAATGCGGCCCAGTCTATC
GGGAGCGTCATCTCGTTGCCCTTTGTCGCTGTCTTGTCGGACAGAATTGG
AAGACGCCTAACCTTGCTTTCCGGTGCAATCGTGATCATCATCGCCTCTA
TTATTCAAGCAGCGTCAGTTCATTATGGCATGTTTGTATTTTCACGTGTG
TTGGTTGGCGTCGGCTCGATGCTGGTCGTGCAGCCGTCGCCCATGTTGAT
CACTGAACTGGCGTATCCAACTCACCGAGGGAAGTACACCAGCGCCTTCT
GGACCATGTACTATCTTGGAGCTATTCTGGCCTCATGGGCCTCATATGGA
ACTCAAATGCACCTCAATAAATCCAGTTGGAGCTGGAGAGTTCCATCAAT
ACTTCAAGCTGGATTTCCGATCGTTCAGGTTCTCTTCTGGTGGTTAATCG
CCAATGGACAGCCGGAAGAGGCTGAAGAATTACTTGCCCGATTCTATACT
GCCGGGGACACTTCGCACCCTCTGATACAATTCGAAATGGCTGAGATCGG
GCGTACTATCGAAATGGAGAGTCAAGCCGCGGAGACCAAATGGACAACGT
TGGTTAAGACTCCTGGAAACCGCAAGCGCACATTTATCGCAGTCAGCATT
GGTGCCTTTGCACAATGGAACGGCGTTGCGGTCGTATCTTACTATCTCAC
ACTCGTTCTCGACACGGTCGGTATCAAAGATCCAAGCACTCAGACAATGA
TCAATGGCCTGCTGCAAGTATTTAACTTCATTGCAGCTGGCAGTGCTGCT
ATGTTGGTTGACCGATTGGGTCGTCGTACCCTGTTTCTTTGGTCGGCTTC
GGGAATGCTCCTTTCCTTCATAATATGGACTGCCTGCTCAGCTGTCTTTG
ACAGCACTCAGGGCAAGCCCCTTGGTAATACGGTGATTGCATTTGTCTTC
ATTTTCTTCTTCCATTACGACATCGCCTATACACCGTTGCTATTGGGCTA
TCCAACTGAGATCTTTCCGTATTCCATACGAAGCAAGGGACTGACTGTTG
AGCTATTAAGTGTATACGGCTCCCTTATTATACTGGCATTCGTCAACCCG
ATTGCTCTCGATAGTATCGGCTGGCATTACTACATCTTTTTCTGTTGTTT
TGATGTAGTGGTATTGGCAGTAACTTGGCTCGCCTTTCCCGAGACGAAGA
GCCATTCACTTGAAGAGATTGCCGAAGTATTTGACGGGCCATTACCTGCT
ACGAGCGGGATTGTTTTTGCCAAGGATGACGATGCGGTTGGGAAATGTGA
ACATACTGAGCATGCGGCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000221.10 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1169:sugar transport protein |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | Sugar (and other) transporter family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3923803..3925454 + |
|
