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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3948515..3949523- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48460-T1 ID=CAN33_48460-T1|Name=CAN33_48460-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1009bp|location=Sequence derived from alignment at NKJJ01000022.1:3948515..3949523- (Aspergillus niger FDAARGOS_311)
ATGATTTCGACCTGGCAAGCACCGAAGGACTACCGCGAGCGCCCTGTAGT
AGTTCTCGGTGGTGGTGTTTTGGGACGTCGCATTGGTATAAAATCCTGAC
CCTAGGTTGGCAAACAACACAGGACACGGCTAACCAACTACGCAGCCTGC
ATTTGGGCATCAGCAGGCTACAACGTCCACGTCCGTGACCCGAGCCCCGA
GCAGCGCGCCGACTGCATCACCTATGTAAACGAAAATGTCGCCTCATATG
CAGTACACACCGGAGCCAAGCCTGGCCCCATTACAGCATTCGAGGATCTG
GCGCAGGCGATCGAGAATGCGTGGCTCGTTATAGAGTGTGTTCCTGAGGT
GCTCCAACTCAAGATCGACACCTTCGCAGAGCTGGAGAAACATGCTCCGA
CAGACTGCATTTTGGCAACCAACTCATCCTCCTATCGCTCCTCGGAAATG
CTGGAAAAAGTGTCGGAAGCAACCAAGTCCCGTATCTTGAACATGCATTA
CTACATGCCTCCACAGGTCATGGTTGTGGAGCTGATGACGGATGGGCTTA
CAGAGCCGTCAATCCTTCAATTTATGGCTGAGCGCTCGAAGGAAGTGGCC
ACTAAGCCCTACATTGCGAGGAAGGAGTCTACTGGGTTCATTTTCAACCG
TCTGTGGGCGGCTGTTAAGCGCGAAACTCTAACGATTCTGGCTGAGGATG
TTTCTACGCCAAGTGAGATTGACTCTCTATGGACTGAGATGTTTATAAAG
GGGAAGACGCTGCCTTGCGAGATGATGGATGGTATGCCATGCCCTGCACC
TTGCTAGCTTCGTATTTTACGCTGATTATGTTATTACTGCAGCTGTCGGG
CTTGACACCGTTGCTTTCATCGAAAAGCATTACGTCGCTGAACGAGGTCT
TGATACCGAGAAAACCGTCGACTTTCTCCAAACCAACTACCTTAGCCAAG
GCAAACTGGGGAATAAGTCATCCAAAGGCGGGCTTTATTCGCCAGCGGAA
AAGTTTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3948515..3949523- >CAN33_48460-T1 ID=CAN33_48460-T1|Name=CAN33_48460-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2664bp|location=Sequence derived from alignment at NKJJ01000022.1:3948515..3949523- (Aspergillus niger FDAARGOS_311)
CTGTCGGGCTTGACACCGTTGCTTTCATCGAAAAGCATTACGTCGCTGAA
CGAGGTCTTGATACCGAGAAAACCGTCGACTTTCTCCAAACCAACTACCT
TAGCCAAGGCAAACTGGGGAATAAGTCATCCAAAGGCGGGCTTTATTCGC
CAGCGGAAAAGTTTTGACCTGCATTTGGGCATCAGCAGGCTACAACGTCC
ACGTCCGTGACCCGAGCCCCGAGCAGCGCGCCGACTGCATCACCTATGTA
AACGAAAATGTCGCCTCATATGCAGTACACACCGGAGCCAAGCCTGGCCC
CATTACAGCATTCGAGGATCTGGCGCAGGCGATCGAGAATGCGTGGCTCG
TTATAGAGTGTGTTCCTGAGGTGCTCCAACTCAAGATCGACACCTTCGCA
GAGCTGGAGAAACATGCTCCGACAGACTGCATTTTGGCAACCAACTCATC
CTCCTATCGCTCCTCGGAAATGCTGGAAAAAGTGTCGGAAGCAACCAAGT
CCCGTATCTTGAACATGCATTACTACATGCCTCCACAGGTCATGGTTGTG
GAGCTGATGACGGATGGGCTTACAGAGCCGTCAATCCTTCAATTTATGGC
TGAGCGCTCGAAGGAAGTGGCCACTAAGCCCTACATTGCGAGGAAGGAGT
CTACTGGGTTCATTTTCAACCGTCTGTGGGCGGCTGTTAAGCGCGAAACT
CTAACGATTCTGGCTGAGGATGTTTCTACGCCAAGTGAGATTGACTCTCT
ATGGACTGAGATGTTTATAAAGGGGAAGACGCTGCCTTGCGAGATGATGG
ATGATGATTTCGACCTGGCAAGCACCGAAGGACTACCGCGAGCGCCCTGT
AGTAGTTCTCGGTGGTGGTGTTTTGGGACGTCGCATTGCTGTCGGGCTTG
ACACCGTTGCTTTCATCGAAAAGCATTACGTCGCTGAACGAGGTCTTGAT
ACCGAGAAAACCGTCGACTTTCTCCAAACCAACTACCTTAGCCAAGGCAA
ACTGGGGAATAAGTCATCCAAAGGCGGGCTTTATTCGCCAGCGGAAAAGT
TTTGACCTGCATTTGGGCATCAGCAGGCTACAACGTCCACGTCCGTGACC
CGAGCCCCGAGCAGCGCGCCGACTGCATCACCTATGTAAACGAAAATGTC
GCCTCATATGCAGTACACACCGGAGCCAAGCCTGGCCCCATTACAGCATT
CGAGGATCTGGCGCAGGCGATCGAGAATGCGTGGCTCGTTATAGAGTGTG
TTCCTGAGGTGCTCCAACTCAAGATCGACACCTTCGCAGAGCTGGAGAAA
CATGCTCCGACAGACTGCATTTTGGCAACCAACTCATCCTCCTATCGCTC
CTCGGAAATGCTGGAAAAAGTGTCGGAAGCAACCAAGTCCCGTATCTTGA
ACATGCATTACTACATGCCTCCACAGGTCATGGTTGTGGAGCTGATGACG
GATGGGCTTACAGAGCCGTCAATCCTTCAATTTATGGCTGAGCGCTCGAA
GGAAGTGGCCACTAAGCCCTACATTGCGAGGAAGGAGTCTACTGGGTTCA
TTTTCAACCGTCTGTGGGCGGCTGTTAAGCGCGAAACTCTAACGATTCTG
GCTGAGGATGTTTCTACGCCAAGTGAGATTGACTCTCTATGGACTGAGAT
GTTTATAAAGGGGAAGACGCTGCCTTGCGAGATGATGGATGATGATTTCG
ACCTGGCAAGCACCGAAGGACTACCGCGAGCGCCCTGTAGTAGTTCTCGG
TGGTGGTGTTTTGGGACGTCGCATTGCTGTCGGGCTTGACACCGTTGCTT
TCATCGAAAAGCATTACGTCGCTGAACGAGGTCTTGATACCGAGAAAACC
GTCGACTTTCTCCAAACCAACTACCTTAGCCAAGGCAAACTGGGGAATAA
GTCATCCAAAGGCGGGCTTTATTCGCCAGCGGAAAAGTTTTGACCTGCAT
TTGGGCATCAGCAGGCTACAACGTCCACGTCCGTGACCCGAGCCCCGAGC
AGCGCGCCGACTGCATCACCTATGTAAACGAAAATGTCGCCTCATATGCA
GTACACACCGGAGCCAAGCCTGGCCCCATTACAGCATTCGAGGATCTGGC
GCAGGCGATCGAGAATGCGTGGCTCGTTATAGAGTGTGTTCCTGAGGTGC
TCCAACTCAAGATCGACACCTTCGCAGAGCTGGAGAAACATGCTCCGACA
GACTGCATTTTGGCAACCAACTCATCCTCCTATCGCTCCTCGGAAATGCT
GGAAAAAGTGTCGGAAGCAACCAAGTCCCGTATCTTGAACATGCATTACT
ACATGCCTCCACAGGTCATGGTTGTGGAGCTGATGACGGATGGGCTTACA
GAGCCGTCAATCCTTCAATTTATGGCTGAGCGCTCGAAGGAAGTGGCCAC
TAAGCCCTACATTGCGAGGAAGGAGTCTACTGGGTTCATTTTCAACCGTC
TGTGGGCGGCTGTTAAGCGCGAAACTCTAACGATTCTGGCTGAGGATGTT
TCTACGCCAAGTGAGATTGACTCTCTATGGACTGAGATGTTTATAAAGGG
GAAGACGCTGCCTTGCGAGATGATGGATGATGATTTCGACCTGGCAAGCA
CCGAAGGACTACCGCGAGCGCCCTGTAGTAGTTCTCGGTGGTGGTGTTTT
GGGACGTCGCATTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006631 | fatty acid metabolic process |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0070403 | NAD+ binding |
| GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR006108 |
| DBxref | InterPro:IPR013328 |
| DBxref | InterPro:IPR022694 |
| DBxref | InterPro:IPR006176 |
| DBxref | PFAM:PF02737 |
| DBxref | PFAM:PF00725 |
| Product | 3-hydroxyacyl-CoA dehydrogenase NAD binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3948515..3949523 - |
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