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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4139841..4140987+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48750-T1 ID=CAN33_48750-T1|Name=CAN33_48750-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1147bp|location=Sequence derived from alignment at NKJJ01000022.1:4139841..4140987+ (Aspergillus niger FDAARGOS_311)
ATGTCAAACTCAACCACCAACAGCACATCCCTCGACCCCTCCGACTACTG
CACCCTCTCCATCTGTCCCCTCTCCGACGCCTACGTCAACTACGTCCCCT
CACTCCCCGGCAACATCTTCTACCTGGCCGTTTTCTCCGCCCTCCTCATC
GCCCAACTCATCCTAGGAATCCGCTACCGCACCTGGGGCTACCTAACCGG
CCTATTCGGCGGTCTCCTCCTTGAGATAATCGGCTACGCAGGACGTATTC
AGATGCACTATAACCCGTTCAAATTCAATCCTTACCTTGAGTATGCCCTT
CCCCATTTCCCCCCAACTTCCATACCCTTTTCCAATTCCTCCTTTTCACA
TTACAAACAAAGATCTAATAAGAAATCTATGAAACAGATACCTAATTTGT
CTAACCATCGCCCCCGCCCTCCTCTCCGCCTCCATCTACATCTGCCTAAC
CCGGATCATAATAATCTACGGCGCAGAAATCTCCCGCCTAAAACCAAAAA
CATACACCTACCTCTTCGTCTTCTGCGACCTCGTCTCTCTAATTCTACAA
GCCGCCGGCGGCGCAATCACCTCCACTGCGGACGCAGACCAAGCGGATCT
CGCCCAAACAGGGATAGATATCATGATTGCGGGGCTCGCCAGCCAGGTTG
TTTCCCTGGTGTTGTTTATGGGTCTGTGTGCGGATTTCGCCTACCGGGTA
TGGAAGAATCCCGGGAAGTTGAATGGTGATTTTAGGATGCGGGAGGTGAG
GAGGAGTATGGTGTGGAAGGGGTTTTTGGGTGGTGAGCATACCCCTTTCT
TTCTGGGATTTATTTGTGTGTGGTGTGGGTTTATGGGCTAAACGCACTAT
GTGTGTGTAGGATTATCCCTCGCAACAGTGACTATCTTCATCCGATCCGT
GTTCCGAGTTGCGGAGTTGAAAGGCGGATTCCATAGTAGACTCGCCAACG
ATGAGGTGGATTTCATGGTATTGGAGGGGGCGATGATTGTGCTGGCGACG
TTGGCGTTGACGGTGTTGCATCCGGGATTTTGCTTTGATGGGTTATGGAA
GCAGACGAAGTGGTCGAGGGTGAAGGCCGGGGATGTGGATATGGCGTTTT
TGGATGCGGAGGGGAAGGTGAGGGGGGTGGGGTCGTTGGATAGTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4139841..4140987+ >CAN33_48750-T1 ID=CAN33_48750-T1|Name=CAN33_48750-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2916bp|location=Sequence derived from alignment at NKJJ01000022.1:4139841..4140987+ (Aspergillus niger FDAARGOS_311)
ATGTCAAACTCAACCACCAACAGCACATCCCTCGACCCCTCCGACTACTG
CACCCTCTCCATCTGTCCCCTCTCCGACGCCTACGTCAACTACGTCCCCT
CACTCCCCGGCAACATCTTCTACCTGGCCGTTTTCTCCGCCCTCCTCATC
GCCCAACTCATCCTAGGAATCCGCTACCGCACCTGGGGCTACCTAACCGG
CCTATTCGGCGGTCTCCTCCTTGAGATAATCGGCTACGCAGGACGTATTC
AGATGCACTATAACCCGTTCAAATTCAATCCTTACCTTGAATACCTAATT
TGTCTAACCATCGCCCCCGCCCTCCTCTCCGCCTCCATCTACATCTGCCT
AACCCGGATCATAATAATCTACGGCGCAGAAATCTCCCGCCTAAAACCAA
AAACATACACCTACCTCTTCGTCTTCTGCGACCTCGTCTCTCTAATTCTA
CAAGCCGCCGGCGGCGCAATCACCTCCACTGCGGACGCAGACCAAGCGGA
TCTCGCCCAAACAGGGATAGATATCATGATTGCGGGGCTCGCCAGCCAGG
TTGTTTCCCTGGTGTTGTTTATGGGTCTGTGTGCGGATTTCGCCTACCGG
GTATGGAAGAATCCCGGGAAGTTGAATGGTGATTTTAGGATGCGGGAGGT
GAGGAGGAGTATGGTGTGGAAGGGGTTTTTGGGTGGATTATCCCTCGCAA
CAGTGACTATCTTCATCCGATCCGTGTTCCGAGTTGCGGAGTTGAAAGGC
GGATTCCATAGTAGACTCGCCAACGATGAGGTGGATTTCATGGTATTGGA
GGGGGCGATGATTGTGCTGGCGACGTTGGCGTTGACGGTGTTGCATCCGG
GATTTTGCTTTGATGGGTTATGGAAGCAGACGAAGTGGTCGAGGGTGAAG
GCCGGGGATGTGGATATGGCGTTTTTGGATGCGGAGGGGAAGGTGAGGGG
GGTGGGGTCGTTGGATAGTTAGATGTCAAACTCAACCACCAACAGCACAT
CCCTCGACCCCTCCGACTACTGCACCCTCTCCATCTGTCCCCTCTCCGAC
GCCTACGTCAACTACGTCCCCTCACTCCCCGGCAACATCTTCTACCTGGC
CGTTTTCTCCGCCCTCCTCATCGCCCAACTCATCCTAGGAATCCGCTACC
GCACCTGGGGCTACCTAACCGGCCTATTCGGCGGTCTCCTCCTTGAGATA
ATCGGCTACGCAGGACGTATTCAGATGCACTATAACCCGTTCAAATTCAA
TCCTTACCTTGAATACCTAATTTGTCTAACCATCGCCCCCGCCCTCCTCT
CCGCCTCCATCTACATCTGCCTAACCCGGATCATAATAATCTACGGCGCA
GAAATCTCCCGCCTAAAACCAAAAACATACACCTACCTCTTCGTCTTCTG
CGACCTCGTCTCTCTAATTCTACAAGCCGCCGGCGGCGCAATCACCTCCA
CTGCGGACGCAGACCAAGCGGATCTCGCCCAAACAGGGATAGATATCATG
ATTGCGGGGCTCGCCAGCCAGGTTGTTTCCCTGGTGTTGTTTATGGGTCT
GTGTGCGGATTTCGCCTACCGGGTATGGAAGAATCCCGGGAAGTTGAATG
GTGATTTTAGGATGCGGGAGGTGAGGAGGAGTATGGTGTGGAAGGGGTTT
TTGGGTGGATTATCCCTCGCAACAGTGACTATCTTCATCCGATCCGTGTT
CCGAGTTGCGGAGTTGAAAGGCGGATTCCATAGTAGACTCGCCAACGATG
AGGTGGATTTCATGGTATTGGAGGGGGCGATGATTGTGCTGGCGACGTTG
GCGTTGACGGTGTTGCATCCGGGATTTTGCTTTGATGGGTTATGGAAGCA
GACGAAGTGGTCGAGGGTGAAGGCCGGGGATGTGGATATGGCGTTTTTGG
ATGCGGAGGGGAAGGTGAGGGGGGTGGGGTCGTTGGATAGTTAGATGTCA
AACTCAACCACCAACAGCACATCCCTCGACCCCTCCGACTACTGCACCCT
CTCCATCTGTCCCCTCTCCGACGCCTACGTCAACTACGTCCCCTCACTCC
CCGGCAACATCTTCTACCTGGCCGTTTTCTCCGCCCTCCTCATCGCCCAA
CTCATCCTAGGAATCCGCTACCGCACCTGGGGCTACCTAACCGGCCTATT
CGGCGGTCTCCTCCTTGAGATAATCGGCTACGCAGGACGTATTCAGATGC
ACTATAACCCGTTCAAATTCAATCCTTACCTTGAATACCTAATTTGTCTA
ACCATCGCCCCCGCCCTCCTCTCCGCCTCCATCTACATCTGCCTAACCCG
GATCATAATAATCTACGGCGCAGAAATCTCCCGCCTAAAACCAAAAACAT
ACACCTACCTCTTCGTCTTCTGCGACCTCGTCTCTCTAATTCTACAAGCC
GCCGGCGGCGCAATCACCTCCACTGCGGACGCAGACCAAGCGGATCTCGC
CCAAACAGGGATAGATATCATGATTGCGGGGCTCGCCAGCCAGGTTGTTT
CCCTGGTGTTGTTTATGGGTCTGTGTGCGGATTTCGCCTACCGGGTATGG
AAGAATCCCGGGAAGTTGAATGGTGATTTTAGGATGCGGGAGGTGAGGAG
GAGTATGGTGTGGAAGGGGTTTTTGGGTGGATTATCCCTCGCAACAGTGA
CTATCTTCATCCGATCCGTGTTCCGAGTTGCGGAGTTGAAAGGCGGATTC
CATAGTAGACTCGCCAACGATGAGGTGGATTTCATGGTATTGGAGGGGGC
GATGATTGTGCTGGCGACGTTGGCGTTGACGGTGTTGCATCCGGGATTTT
GCTTTGATGGGTTATGGAAGCAGACGAAGTGGTCGAGGGTGAAGGCCGGG
GATGTGGATATGGCGTTTTTGGATGCGGAGGGGAAGGTGAGGGGGGTGGG
GTCGTTGGATAGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4139841..4140987 + |
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