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CAN33_48845-T1, CAN33_48845-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_48845-T1
Unique NameCAN33_48845-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4207473..4209998+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_48845-T1 ID=CAN33_48845-T1|Name=CAN33_48845-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2526bp|location=Sequence derived from alignment at NKJJ01000022.1:4207473..4209998+ (Aspergillus niger FDAARGOS_311)
ATGATCAACGCCGTCCTCGTCTTCAACAACAACGGACAACCCCGTTTAAC
CAAGTTCTACACACAGATTGTGAGTCTACACTTGATCGCGTCTTTATAAC
CAACCCAGCCCAACCCCCTCATCCACCAAGCATCCCATACTCACAATGCC
TAACCAAACAGGACACCCAAACCAAACAATCCCTAATCGCGCAAATCTAC
AACCTCGTTTCCCAACGCCCCGCCAGCGCCTGTAACTTCCTCCCCCTCCC
TCCACTTCTCTCCCGCGGCGCAAGCTCTGGCGCAGAAGATGGCCCCTCCG
ACGCGCCAACCCAAATCACTTACCGCAACTATGCCACTTTGTCGTTCATC
ATGATCTCCACGTCGATGGAGTCGCCGCTTGCCCTGATCGATCTAATTCA
GGTCTTCGTGGAGGCGCTGGATCGCATGTTCGAGAACGTGTGTGAGCTGG
ATCTCATCTTCGGGTATGAGACCATGCACGCGGTTTTGAGTGAGATGATT
GTTGGGGGTGTGGTGGTGGAGACGAATATTGACAAGATTGTCTCGGCGGT
GAGGGATCAAGAGGGTAATTTGGGGAAAAAGAAGGCTATTCAGGCGGCTA
GTTCGGGGATTGGGAGGACGGGCCTGCCTGGGTTGGGGGCTTGGAGGTAA
GGTGAGGTGAGGTGATGTGATGGGGTACTATGTTACGATTAGGTTATGAT
ATTGGGTTCTGTTTGGTTTAGATTATGTTTGCTTCGATGGAAGACTATTG
GTGTGTCATATAGAGGGATAGTACTACTATGGTTACCTGAGCATGAGTTT
GGCGTTTCTAGTGGATGTATGTTGGGTATTGAATATATAGACCGGATGTC
CTGTGGCCTGGATAATTGTTGAAATTGTCGTGAACACGGTCCAACTGATA
CGCATACCATATAATATTCTAAGGACCCACTGAGCTATACGGGAATCAGT
ACAATCAATGAATGAGCATGTCAACGGAATACTAGTAGTCGACTGTCATC
CAGGTCTAGAATATAGTACGAAAACATAGACAGATCAAAGTTCAACGTGA
TTGGTCCATTGCATTGAAGCAGCCCGAAGGGTTAGCCCTAGGTCACCTGA
TTGAGCCACAGCCAGGCCCGGCGAACAAGATAATCCGAACGCGGCCCACA
CAAGCAAACGGCGCTAATGGATTTCTTCTCGCGGCGCGAAATTAATTGAA
GTTCTTCTTCTTTTCTTTCCCTTGACTGTCAATCCTGCACCCAACGCCGC
CGCGGATCCCGTCGACAAAATGGTAAGCACATAGAATCGTCCATTTCACG
CCTCTTCTATTCAATTAGAATTGAGCTATCGACTACGCTGCGAATATGTC
GTGTGACGATTTCCACGTCCCGCTTCATCTCGCAACAGTCGAGAAGCGAC
AATAAAAAAAATTTCCGTTGATTCGCTCTCTTCACAGTCCGTAAAACGAT
TGTGAAGGGGTGGATCAGCGATGATTTTTGGCTGGAAGACACAAAGCTGT
TCTTAAGGAAACTTGGGACAGTTTTGTGTCTCTCCCTAGAGTTCAAGGAA
GATGCAGCAAGATGGTGGACAAGATTGCTGATCTTCTTTTCTCAATGATA
GCCTGCCCAGAAGTCCGGAAAGAAAACTGCCCCCCTCCCTTACCCCCAGG
GTAAGGCTGGCGCTAAGAAGGCTCCCAAGGTATGTGCTGACACCCTACAT
CAACTACTGAAACCACCATGAGAGAGATATATACTAACATGGTATGGATA
GAACCCTCTCATCGAGAAGCGCCCCCGCAACTTCGGCATTGGCCAGGACA
TCCAGCCCAAGCGCAACCTCGGTCGCTTCGTCAAGTGGCCCGAGTATGTC
CGTCTGCAGCGCCAGAAGAAGATCTTGAACCTCCGTCTCAAGGTCCCTCC
TTCCATTGCTCAGTTCCAGAACACCCTGGACCGCAACACCGCTGCCCAGA
CCTTCAAGTTCCTCAACAAGTACCGCCCCGAGACCAAGGTCGAGAAGAAG
GAGCGTCTCCACGCCGAGGCCACCGCCGTCGCTGAGGGCAAGAAGAAGGA
GGATGTCTCCAAGAAGCCCTACAACGTCAAGTACGGTCTCAACCACGTTG
TCGGCCTCGTCGAGAACAAGAAGGCTTCCCTCGTCCTGATTGCTCACGAC
GTTGACCCCATTGAGCTGGTTGTCTTCCTTCCCGCTCTTTGCCGCAAGAT
GGGTGTCCCTTACGCTATTGTTAAGGGCAAGGCTCGTCTCGGTACCGTTG
TCCACAAGAAGGTATTTATCCCCTTATATATATCTCTCTACCCTCCAATA
GCATTAAACTAATGAGTTGGAATAGACCTCCGCTGTCCTCGCTCTCACCG
AGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTCTCCGCCGTC
AAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGCCGCCACTGGGGTGG
TGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGAAGCGCAAGG
CCGTTGAGGGTGCCATCCGTGTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4207473..4209998+

>CAN33_48845-T1 ID=CAN33_48845-T1|Name=CAN33_48845-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6225bp|location=Sequence derived from alignment at NKJJ01000022.1:4207473..4209998+ (Aspergillus niger FDAARGOS_311)
ATGATCAACGCCGTCCTCGTCTTCAACAACAACGGACAACCCCGTTTAAC
CAAGTTCTACACACAGATTGACACCCAAACCAAACAATCCCTAATCGCGC
AAATCTACAACCTCGTTTCCCAACGCCCCGCCAGCGCCTGTAACTTCCTC
CCCCTCCCTCCACTTCTCTCCCGCGGCGCAAGCTCTGGCGCAGAAGATGG
CCCCTCCGACGCGCCAACCCAAATCACTTACCGCAACTATGCCACTTTGT
CGTTCATCATGATCTCCACGTCGATGGAGTCGCCGCTTGCCCTGATCGAT
CTAATTCAGGTCTTCGTGGAGGCGCTGGATCGCATGTTCGAGAACGTGTG
TGAGCTGGATCTCATCTTCGGGTATGAGACCATGCACGCGGTTTTGAGTG
AGATGATTGTTGGGGGTGTGGTGGTGGAGACGAATATTGACAAGATTGTC
TCGGCGCCTGCCCAGAAGTCCGGAAAGAAAACTGCCCCCCTCCCTTACCC
CCAGGGTAAGGCTGGCGCTAAGAAGGCTCCCAAGAACCCTCTCATCGAGA
AGCGCCCCCGCAACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAAC
CTCGGTCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAA
GAAGATCTTGAACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCC
AGAACACCCTGGACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAAC
AAGTACCGCCCCGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGA
GGCCACCGCCGTCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGC
CCTACAACGTCAAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAAC
AAGAAGGCTTCCCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGCT
GGTTGTCTTCCTTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTA
TTGTTAAGGGCAAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGACCTCC
GCTGTCCTCGCTCTCACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGC
CAAGCTCCTCTCCGCCGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGT
CCCGCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGC
CAGGAGAAGAAGCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTAAATGAT
CAACGCCGTCCTCGTCTTCAACAACAACGGACAACCCCGTTTAACCAAGT
TCTACACACAGATTGACACCCAAACCAAACAATCCCTAATCGCGCAAATC
TACAACCTCGTTTCCCAACGCCCCGCCAGCGCCTGTAACTTCCTCCCCCT
CCCTCCACTTCTCTCCCGCGGCGCAAGCTCTGGCGCAGAAGATGGCCCCT
CCGACGCGCCAACCCAAATCACTTACCGCAACTATGCCACTTTGTCGTTC
ATCATGATCTCCACGTCGATGGAGTCGCCGCTTGCCCTGATCGATCTAAT
TCAGGTCTTCGTGGAGGCGCTGGATCGCATGTTCGAGAACGTGTGTGAGC
TGGATCTCATCTTCGGGTATGAGACCATGCACGCGGTTTTGAGTGAGATG
ATTGTTGGGGGTGTGGTGGTGGAGACGAATATTGACAAGATTGTCTCGGC
GCCTGCCCAGAAGTCCGGAAAGAAAACTGCCCCCCTCCCTTACCCCCAGG
GTAAGGCTGGCGCTAAGAAGGCTCCCAAGAACCCTCTCATCGAGAAGCGC
CCCCGCAACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAACCTCGG
TCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAAGA
TCTTGAACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGAAC
ACCCTGGACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAACAAGTA
CCGCCCCGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGCCA
CCGCCGTCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTAC
AACGTCAAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAACAAGAA
GGCTTCCCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGCTGGTTG
TCTTCCTTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTATTGTT
AAGGGCAAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGACCTCCGCTGT
CCTCGCTCTCACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGC
TCCTCTCCGCCGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGC
CGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGA
GAAGAAGCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTAAATGATCAACG
CCGTCCTCGTCTTCAACAACAACGGACAACCCCGTTTAACCAAGTTCTAC
ACACAGATTGACACCCAAACCAAACAATCCCTAATCGCGCAAATCTACAA
CCTCGTTTCCCAACGCCCCGCCAGCGCCTGTAACTTCCTCCCCCTCCCTC
CACTTCTCTCCCGCGGCGCAAGCTCTGGCGCAGAAGATGGCCCCTCCGAC
GCGCCAACCCAAATCACTTACCGCAACTATGCCACTTTGTCGTTCATCAT
GATCTCCACGTCGATGGAGTCGCCGCTTGCCCTGATCGATCTAATTCAGG
TCTTCGTGGAGGCGCTGGATCGCATGTTCGAGAACGTGTGTGAGCTGGAT
CTCATCTTCGGGTATGAGACCATGCACGCGGTTTTGAGTGAGATGATTGT
TGGGGGTGTGGTGGTGGAGACGAATATTGACAAGATTGTCTCGGCGCCTG
CCCAGAAGTCCGGAAAGAAAACTGCCCCCCTCCCTTACCCCCAGGGTAAG
GCTGGCGCTAAGAAGGCTCCCAAGAACCCTCTCATCGAGAAGCGCCCCCG
CAACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAACCTCGGTCGCT
TCGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAAGATCTTG
AACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGAACACCCT
GGACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAACAAGTACCGCC
CCGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGCCACCGCC
GTCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACAACGT
CAAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAACAAGAAGGCTT
CCCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGCTGGTTGTCTTC
CTTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTATTGTTAAGGG
CAAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGACCTCCGCTGTCCTCG
CTCTCACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTC
TCCGCCGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGCCGCCA
CTGGGGTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGA
AGCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTAAATGATCAACGCCGTC
CTCGTCTTCAACAACAACGGACAACCCCGTTTAACCAAGTTCTACACACA
GATTGACACCCAAACCAAACAATCCCTAATCGCGCAAATCTACAACCTCG
TTTCCCAACGCCCCGCCAGCGCCTGTAACTTCCTCCCCCTCCCTCCACTT
CTCTCCCGCGGCGCAAGCTCTGGCGCAGAAGATGGCCCCTCCGACGCGCC
AACCCAAATCACTTACCGCAACTATGCCACTTTGTCGTTCATCATGATCT
CCACGTCGATGGAGTCGCCGCTTGCCCTGATCGATCTAATTCAGGTCTTC
GTGGAGGCGCTGGATCGCATGTTCGAGAACGTGTGTGAGCTGGATCTCAT
CTTCGGGTATGAGACCATGCACGCGGTTTTGAGTGAGATGATTGTTGGGG
GTGTGGTGGTGGAGACGAATATTGACAAGATTGTCTCGGCGCCTGCCCAG
AAGTCCGGAAAGAAAACTGCCCCCCTCCCTTACCCCCAGGGTAAGGCTGG
CGCTAAGAAGGCTCCCAAGAACCCTCTCATCGAGAAGCGCCCCCGCAACT
TCGGCATTGGCCAGGACATCCAGCCCAAGCGCAACCTCGGTCGCTTCGTC
AAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAAGATCTTGAACCT
CCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGAACACCCTGGACC
GCAACACCGCTGCCCAGACCTTCAAGTTCCTCAACAAGTACCGCCCCGAG
ACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGCCACCGCCGTCGC
TGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACAACGTCAAGT
ACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAACAAGAAGGCTTCCCTC
GTCCTGATTGCTCACGACGTTGACCCCATTGAGCTGGTTGTCTTCCTTCC
CGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTATTGTTAAGGGCAAGG
CTCGTCTCGGTACCGTTGTCCACAAGAAGACCTCCGCTGTCCTCGCTCTC
ACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTCTCCGC
CGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGCCGCCACTGGG
GTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGAAGCGC
AAGGCCGTTGAGGGTGCCATCCGTGTCTAAATGATCAACGCCGTCCTCGT
CTTCAACAACAACGGACAACCCCGTTTAACCAAGTTCTACACACAGATTG
ACACCCAAACCAAACAATCCCTAATCGCGCAAATCTACAACCTCGTTTCC
CAACGCCCCGCCAGCGCCTGTAACTTCCTCCCCCTCCCTCCACTTCTCTC
CCGCGGCGCAAGCTCTGGCGCAGAAGATGGCCCCTCCGACGCGCCAACCC
AAATCACTTACCGCAACTATGCCACTTTGTCGTTCATCATGATCTCCACG
TCGATGGAGTCGCCGCTTGCCCTGATCGATCTAATTCAGGTCTTCGTGGA
GGCGCTGGATCGCATGTTCGAGAACGTGTGTGAGCTGGATCTCATCTTCG
GGTATGAGACCATGCACGCGGTTTTGAGTGAGATGATTGTTGGGGGTGTG
GTGGTGGAGACGAATATTGACAAGATTGTCTCGGCGCCTGCCCAGAAGTC
CGGAAAGAAAACTGCCCCCCTCCCTTACCCCCAGGGTAAGGCTGGCGCTA
AGAAGGCTCCCAAGAACCCTCTCATCGAGAAGCGCCCCCGCAACTTCGGC
ATTGGCCAGGACATCCAGCCCAAGCGCAACCTCGGTCGCTTCGTCAAGTG
GCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAAGATCTTGAACCTCCGTC
TCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGAACACCCTGGACCGCAAC
ACCGCTGCCCAGACCTTCAAGTTCCTCAACAAGTACCGCCCCGAGACCAA
GGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGCCACCGCCGTCGCTGAGG
GCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACAACGTCAAGTACGGT
CTCAACCACGTTGTCGGCCTCGTCGAGAACAAGAAGGCTTCCCTCGTCCT
GATTGCTCACGACGTTGACCCCATTGAGCTGGTTGTCTTCCTTCCCGCTC
TTTGCCGCAAGATGGGTGTCCCTTACGCTATTGTTAAGGGCAAGGCTCGT
CTCGGTACCGTTGTCCACAAGAAGACCTCCGCTGTCCTCGCTCTCACCGA
GGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTCTCCGCCGTCA
AGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGCCGCCACTGGGGTGGT
GGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGAAGCGCAAGGC
CGTTGAGGGTGCCATCCGTGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:1990904ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL8CAN33_48845Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48845-T1CAN33_48845-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48845-T1.exon1CAN33_48845-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_48845-T1.exon2CAN33_48845-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_48845-T1.exon3CAN33_48845-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_48845-T1.exon4CAN33_48845-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_48845-T1.exon5CAN33_48845-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48845-T1.cdsCAN33_48845-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteBUSCO:EOG09265FGA
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR004037
DBxrefInterPro:IPR022775
DBxrefInterPro:IPR004038
DBxrefInterPro:IPR038524
DBxrefInterPro:IPR001921
DBxrefInterPro:IPR018492
DBxrefPFAM:PF01248
DBxrefPFAM:PF01217
Product60S ribosomal protein L8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4207473..4209998 +
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