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CAN33_48855-T1, CAN33_48855-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_48855-T1
Unique NameCAN33_48855-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4215315..4216327-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_48855-T1 ID=CAN33_48855-T1|Name=CAN33_48855-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1013bp|location=Sequence derived from alignment at NKJJ01000022.1:4215315..4216327- (Aspergillus niger FDAARGOS_311)
ATGCCCGAGATTTCTGAAATTCTCGGCGAACTCGTCCGCGGCCGCCATGC
TCCTCCGGCCTGGACAGCAAGCCTCACATCAAGCCCCATCGTGCTCAACC
GGGTCAATCGCCATTTAATTGCTATCTCGCTGAGCGGATAGACTTTCAAC
TTTTCTCGGAGCTTTCCGAAGGCCGACACCTCCCGTCGCTCCCTTGCCCG
GCACCACCGCAACGGTCTACAAAAACTCCCGTCCAAGCGGATTGACCTGG
CCGTGCTTCTTCCCCAGCACCACCTCTACAACAAAAGGAGCATTCAATCC
TTCATACAGATCACCACAATGCGTCCCGCCAATCTTCTCCGGGCTCTCCA
GCCCCTGCGCTCCTCCATGATGCGCTCCACCACCACCACTACCTCCTCCA
CAACAGCGCCCTCTCTATACCAAACCACTCGGCGCTCTCTCACGACCACC
GTCCCCGACTTAACGAGCAACAACAACAACAACAACAACCCCAACAAGAA
GCAGACCTGCCATCCTCCTCCACTACTACTACCACCGCCACCGTCGTCCC
TCCCTCCCTCCGCAGCTACCCCTACAAGACCAAAACCGGCACTGTCGTCT
CCGTTGGCCGTATGGACCGCACCGTCCGCGTCAGCCACCGCCACACCATC
TGGGACGCGCACATCCAGAAGCCCTACCCCAAGATAACTACCTACCTGGT
TTCGGATCCGCGGAACTCGCTGCGCGAGGGCGACGTCATTGAGTTCTCGT
CCGGGTACCCGAAGAGCCGGAATGTGCGGCACGTTGTCGAGAGAATCATT
GCGCCGTTTGGATCTGCTATTGAAGATAGACCGGCTGTTATGACCCGCGA
GGAGAGGGATGCTGAGCGTGCGGCAAAGAGGGCTGCTAAGTGGGAGCGTA
GGGAGGCGAGGAAGGTGGAGGCTGGTGTCCGTGAGGGTGAGGGGAAGGTT
GGGGAGCATGTTGGGAGGATTAGGAGGTTGGTACTCGAGAGAACTGGTGG
GGTTGAGGTTTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4215315..4216327-

>CAN33_48855-T1 ID=CAN33_48855-T1|Name=CAN33_48855-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1908bp|location=Sequence derived from alignment at NKJJ01000022.1:4215315..4216327- (Aspergillus niger FDAARGOS_311)
ACCAAAACCGGCACTGTCGTCTCCGTTGGCCGTATGGACCGCACCGTCCG
CGTCAGCCACCGCCACACCATCTGGGACGCGCACATCCAGAAGCCCTACC
CCAAGATAACTACCTACCTGGTTTCGGATCCGCGGAACTCGCTGCGCGAG
GGCGACGTCATTGAGTTCTCGTCCGGGTACCCGAAGAGCCGGAATGTGCG
GCACGTTGTCGAGAGAATCATTGCGCCGTTTGGATCTGCTATTGAAGATA
GACCGGCTGTTATGACCCGCGAGGAGAGGGATGCTGAGCGTGCGGCAAAG
AGGGCTGCTAAGTGGGAGCGTAGGGAGGCGAGGAAGGTGGAGGCTGGTGT
CCGTGAGGGTGAGGGGAAGGTTGGGGAGCATGTTGGGAGGATTAGGAGGT
TGGTACTCGAGAGAACTGGTGGGGTTGAGGTTTAAACTTTCAACTTTTCT
CGGAGCTTTCCGAAGGCCGACACCTCCCGTCGCTCCCTTGCCCGGCACCA
CCGCAACGGTCTACAAAAACTCCCGTCCAAGCGGATTGACCTGGCCATGC
CCGAGATTTCTGAAATTCTCGGCGAACTCGTCCGCGGCCGCCATGCTCCT
CCGGCCTGGACAGCAAGCCTCACATCAAGCCCCATCACCAAAACCGGCAC
TGTCGTCTCCGTTGGCCGTATGGACCGCACCGTCCGCGTCAGCCACCGCC
ACACCATCTGGGACGCGCACATCCAGAAGCCCTACCCCAAGATAACTACC
TACCTGGTTTCGGATCCGCGGAACTCGCTGCGCGAGGGCGACGTCATTGA
GTTCTCGTCCGGGTACCCGAAGAGCCGGAATGTGCGGCACGTTGTCGAGA
GAATCATTGCGCCGTTTGGATCTGCTATTGAAGATAGACCGGCTGTTATG
ACCCGCGAGGAGAGGGATGCTGAGCGTGCGGCAAAGAGGGCTGCTAAGTG
GGAGCGTAGGGAGGCGAGGAAGGTGGAGGCTGGTGTCCGTGAGGGTGAGG
GGAAGGTTGGGGAGCATGTTGGGAGGATTAGGAGGTTGGTACTCGAGAGA
ACTGGTGGGGTTGAGGTTTAAACTTTCAACTTTTCTCGGAGCTTTCCGAA
GGCCGACACCTCCCGTCGCTCCCTTGCCCGGCACCACCGCAACGGTCTAC
AAAAACTCCCGTCCAAGCGGATTGACCTGGCCATGCCCGAGATTTCTGAA
ATTCTCGGCGAACTCGTCCGCGGCCGCCATGCTCCTCCGGCCTGGACAGC
AAGCCTCACATCAAGCCCCATCACCAAAACCGGCACTGTCGTCTCCGTTG
GCCGTATGGACCGCACCGTCCGCGTCAGCCACCGCCACACCATCTGGGAC
GCGCACATCCAGAAGCCCTACCCCAAGATAACTACCTACCTGGTTTCGGA
TCCGCGGAACTCGCTGCGCGAGGGCGACGTCATTGAGTTCTCGTCCGGGT
ACCCGAAGAGCCGGAATGTGCGGCACGTTGTCGAGAGAATCATTGCGCCG
TTTGGATCTGCTATTGAAGATAGACCGGCTGTTATGACCCGCGAGGAGAG
GGATGCTGAGCGTGCGGCAAAGAGGGCTGCTAAGTGGGAGCGTAGGGAGG
CGAGGAAGGTGGAGGCTGGTGTCCGTGAGGGTGAGGGGAAGGTTGGGGAG
CATGTTGGGAGGATTAGGAGGTTGGTACTCGAGAGAACTGGTGGGGTTGA
GGTTTAAACTTTCAACTTTTCTCGGAGCTTTCCGAAGGCCGACACCTCCC
GTCGCTCCCTTGCCCGGCACCACCGCAACGGTCTACAAAAACTCCCGTCC
AAGCGGATTGACCTGGCCATGCCCGAGATTTCTGAAATTCTCGGCGAACT
CGTCCGCGGCCGCCATGCTCCTCCGGCCTGGACAGCAAGCCTCACATCAA
GCCCCATC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_48855CAN33_48855Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48855-T1CAN33_48855-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48855-T1.cdsCAN33_48855-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48855-T1.exon3CAN33_48855-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_48855-T1.exon2CAN33_48855-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_48855-T1.exon1CAN33_48855-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR000266
DBxrefPFAM:PF00366
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4215315..4216327 -
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