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CAN33_48990-T1, CAN33_48990-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_48990-T1
Unique NameCAN33_48990-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4295107..4296172-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_48990-T1 ID=CAN33_48990-T1|Name=CAN33_48990-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1066bp|location=Sequence derived from alignment at NKJJ01000022.1:4295107..4296172- (Aspergillus niger FDAARGOS_311)
ATGTATCGACTGGTCGGAGCGCTCAGGTTATTGACGCTGGTTGAAGGTGG
AGACGATGCTTGACTCGATTGCAGAGGTGAGGCGCAGTTGACTTCATTCA
GGATGCGGAGGAGTTCCCGATAAGGCCATTGATGACTAACAGGGAAACCA
CCTCTGGATTGTCGCCTCAGGCCATAAGAGCAACTTGCACGTGATGCAGC
TTATCCGCCTAGCGGAGCGATTAGGGCCCCAACCCTGAAACCGCTTCCCG
ATGGGGAATTACCGCACTTTTTTCCTCGACCGCAGCCGCTCCACTCACAT
CAACTACATTTAAACCACCCTCTTCGCGCGTTGTCAAGGCGATTCCCCGA
AGAGCGCTAGGAACTCGCGACAATGTAAGTGATGCACCTAATATCGGCCA
TTGATATCATATAGGATAATGTAGCTAACCCCGAGCCAGGCTTATCCCCA
AGGAAGACCGCAAGAAGATCCACGAGTACCTCTTCCGCGGTATGTGAACA
CCTATGATCCACCGGCCTTGTGTCTCCGAATTGTTGCGCGACGGTCGATC
GATGGATGATGGATGAATCAGTCTTGCTGACGGTTGACTATAGAGGGTGT
GCTCGTGGCCAAGAAGGACTTCAACCTTCCCAAGCATGGCGACATTGACA
CCAAGAACCTCTACGTGATCAAGGCCTGCCAGTCCCTGACCTCCCGCGGC
TACGTCAAGACCCAGTTCTCCTGGCAGTACTACTACTACACCCTCACCCC
CGAGGTATGCTCCACTGATGAAGATGAATGCGTAAGACGGATTGTCTGAC
TGGTTTTGATATAGGGTCTTGACTACCTCCGTGAGTGGCTCCACCTCCCC
GCTGAGGTTGTCCCCGCCACCCACATCAAGCAGCAGCGTTCCCACGCTCC
CCCTCGTGGCATGATGGGCGGTGAGGAGCGTGAGCGTCGTCCCCGTGCTC
CTCGTGAGGGTGGCTACCGCCGCCGCGAGCAGGACAAGGAGGGCGCCGCC
CCCGGCGAGTTCGCTCCCAGCTTCCGTGGTGGATTCGGCCGTGGCCGTGG
TGCTCCCTCCTCCTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4295107..4296172-

>CAN33_48990-T1 ID=CAN33_48990-T1|Name=CAN33_48990-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1956bp|location=Sequence derived from alignment at NKJJ01000022.1:4295107..4296172- (Aspergillus niger FDAARGOS_311)
GGTCTTGACTACCTCCGTGAGTGGCTCCACCTCCCCGCTGAGGTTGTCCC
CGCCACCCACATCAAGCAGCAGCGTTCCCACGCTCCCCCTCGTGGCATGA
TGGGCGGTGAGGAGCGTGAGCGTCGTCCCCGTGCTCCTCGTGAGGGTGGC
TACCGCCGCCGCGAGCAGGACAAGGAGGGCGCCGCCCCCGGCGAGTTCGC
TCCCAGCTTCCGTGGTGGATTCGGCCGTGGCCGTGGTGCTCCCTCCTCCT
AAAGGGTGTGCTCGTGGCCAAGAAGGACTTCAACCTTCCCAAGCATGGCG
ACATTGACACCAAGAACCTCTACGTGATCAAGGCCTGCCAGTCCCTGACC
TCCCGCGGCTACGTCAAGACCCAGTTCTCCTGGCAGTACTACTACTACAC
CCTCACCCCCGAGGCTTATCCCCAAGGAAGACCGCAAGAAGATCCACGAG
TACCTCTTCCGCGATGTATCGACTGGTCGGAGCGCTCAGGGTCTTGACTA
CCTCCGTGAGTGGCTCCACCTCCCCGCTGAGGTTGTCCCCGCCACCCACA
TCAAGCAGCAGCGTTCCCACGCTCCCCCTCGTGGCATGATGGGCGGTGAG
GAGCGTGAGCGTCGTCCCCGTGCTCCTCGTGAGGGTGGCTACCGCCGCCG
CGAGCAGGACAAGGAGGGCGCCGCCCCCGGCGAGTTCGCTCCCAGCTTCC
GTGGTGGATTCGGCCGTGGCCGTGGTGCTCCCTCCTCCTAAAGGGTGTGC
TCGTGGCCAAGAAGGACTTCAACCTTCCCAAGCATGGCGACATTGACACC
AAGAACCTCTACGTGATCAAGGCCTGCCAGTCCCTGACCTCCCGCGGCTA
CGTCAAGACCCAGTTCTCCTGGCAGTACTACTACTACACCCTCACCCCCG
AGGCTTATCCCCAAGGAAGACCGCAAGAAGATCCACGAGTACCTCTTCCG
CGATGTATCGACTGGTCGGAGCGCTCAGGGTCTTGACTACCTCCGTGAGT
GGCTCCACCTCCCCGCTGAGGTTGTCCCCGCCACCCACATCAAGCAGCAG
CGTTCCCACGCTCCCCCTCGTGGCATGATGGGCGGTGAGGAGCGTGAGCG
TCGTCCCCGTGCTCCTCGTGAGGGTGGCTACCGCCGCCGCGAGCAGGACA
AGGAGGGCGCCGCCCCCGGCGAGTTCGCTCCCAGCTTCCGTGGTGGATTC
GGCCGTGGCCGTGGTGCTCCCTCCTCCTAAAGGGTGTGCTCGTGGCCAAG
AAGGACTTCAACCTTCCCAAGCATGGCGACATTGACACCAAGAACCTCTA
CGTGATCAAGGCCTGCCAGTCCCTGACCTCCCGCGGCTACGTCAAGACCC
AGTTCTCCTGGCAGTACTACTACTACACCCTCACCCCCGAGGCTTATCCC
CAAGGAAGACCGCAAGAAGATCCACGAGTACCTCTTCCGCGATGTATCGA
CTGGTCGGAGCGCTCAGGGTCTTGACTACCTCCGTGAGTGGCTCCACCTC
CCCGCTGAGGTTGTCCCCGCCACCCACATCAAGCAGCAGCGTTCCCACGC
TCCCCCTCGTGGCATGATGGGCGGTGAGGAGCGTGAGCGTCGTCCCCGTG
CTCCTCGTGAGGGTGGCTACCGCCGCCGCGAGCAGGACAAGGAGGGCGCC
GCCCCCGGCGAGTTCGCTCCCAGCTTCCGTGGTGGATTCGGCCGTGGCCG
TGGTGCTCCCTCCTCCTAAAGGGTGTGCTCGTGGCCAAGAAGGACTTCAA
CCTTCCCAAGCATGGCGACATTGACACCAAGAACCTCTACGTGATCAAGG
CCTGCCAGTCCCTGACCTCCCGCGGCTACGTCAAGACCCAGTTCTCCTGG
CAGTACTACTACTACACCCTCACCCCCGAGGCTTATCCCCAAGGAAGACC
GCAAGAAGATCCACGAGTACCTCTTCCGCGATGTATCGACTGGTCGGAGC
GCTCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_48990CAN33_48990Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48990-T1CAN33_48990-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48990-T1.cdsCAN33_48990-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48990-T1.exon4CAN33_48990-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_48990-T1.exon3CAN33_48990-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_48990-T1.exon2CAN33_48990-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_48990-T1.exon1CAN33_48990-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR005326
DBxrefInterPro:IPR036388
DBxrefPFAM:PF03501
ProductPlectin/S10 domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4295107..4296172 -
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