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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4407016..4409051+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_49155-T1 ID=CAN33_49155-T1|Name=CAN33_49155-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2036bp|location=Sequence derived from alignment at NKJJ01000022.1:4407016..4409051+ (Aspergillus niger FDAARGOS_311) ATGTCTCCGTCTGCCTTCGACGACACTGACCACGCACAGCGCGAGAGGTC
TCGTTCTCCCCGTCGTCGTTCTCGTAGCCCTCGACGCAGCCGTCGCTCGT
ACTCTCCCCGCAGTCGCTCTCGCAGCCGTGACGACTATCGCCGCTCCGAC
CGTCATTCTCGTTCGCCTATGAGTACGACCCAAGGCGCTCCCGGTGGTCA
TTCTGCTTCTGGTTACGGTGGGCGCGGCAGCTACCCACCTCCCCCCCGTT
CGTTCGAAGATCGCGCAGTCGCCAAAGAACAAATGATGCAAGCCGTGCGC
GAGTCGTCCCAGCAAGACCGTCGCGTCTATGTGGGCAACCTCTCCTACGA
TGTCAAGTGGCATCATCTGAAAGACTTTATGAGACAGGGTGAGCAGGGTC
ATATCGTGTTGCCGGGCGTGTGATAGCGTTTGTGCGGGTCTGGAATCTGT
GGCTGACTTTGGAGGGGGACGTTCCGCGCTCGAACAGCTGGAGAAGTCAT
CTTTGCCGATGTCTTACTGCTTCCCAATGGAATGTCGAAGGTGGGCGCCA
ATGCGTAGTGTGGCTGGTTTCCTTTCCCTTTTTTGTGTTTCTGGATTTTT
CTCTCCCCCGTTGGTTCGCTTGTTATGGACTGTTTGGGTTGACGGGCTGG
GCCTGGCCGTCCGGGATACTGTAGGGATGCGGGTGAGTCGATTCCGTTGG
TCTTTGATCGCCAGTATGTTGTTACTGACGGTGCGCAATAGGATTGTGGA
ATACGCGACCAGGGAACAAGCGCAAAATGCGGTAAACACCCTCAGCAACC
AGAACTTGATGGGAAGACTCGTCTACGTCCGTGAGGTATAATCCACCCTT
TTCCCTCCAGGTCACTGAAAACTTGATCGGTTCCTGACCAAAGCGCAGGA
TCGTGAGCCCGAGCCTCGTTTCACGGGAGGTCCCTCTCGTGGTGACTTCG
GAGGTGGTGGTCGCGGCGGCTTCGGCGGCGGCTTCGGCGGGCCTGCCGGC
GGCGGCGCTGGTGGCCGTCAGCTTTATGTCTCGAATGTTGGTTTACTCCC
ATCCATTATTGACATTTTGATATCGTGCTCGACCGGAATTAGGTATTGAC
GCTGGGGATGTTTAGCTTCCATTCAACGTTGGCTGGCAAGACTTGAAGGA
TCTTTTCCGCCAAGCTGGTAAGTATGGGACGGCAGAGCCTCTATTCAACC
GCCATCTCTGCCTCCTCCCCATCGCAAGCTGTCTTCAGGACTAACATTGA
CTTCTCATTTAGCTCAGCAGGGTGCTGTGATCCGTGCCGATGTCCACACC
GATGCCACTGGCCGTCCCAAGGGCTCTGGTATTGTCGCCTTCGAGTCCCC
TGAGGATGCCCGGAATGCCATTCAGCAGTTCAACGGATACGACTGGCAAG
GACGCCAGCTGGAGGTTCGTGAGGATCGCTTCGCTGGTGCCGGACCTGGG
TTCGGTGGCCGTGGTGGTTTCGGCGGTCGTGGTGGCTTTGGTGGTGGCTT
CGGCGGCCGCGGTGGCTTTGGTGGCCGTGGCGGTTTCGGCGGAGGCTTCC
GTGGTGGTTATGGCGGTGCTCCTGGCGGTTTCGGCGGTGCTCCTGGTGGT
TTCGAGGGCGTGCCCTCTGGACCTCCTAACCCGTTCACCGATTTCGCTAC
TTCTGGCGGCGACAAGAGCGCTGTCATTTACGTGCGCAACCTGCCTTGGT
CGACTTGCAACGAGGATCTGGTGGATCTGTTCTCGACTATTGGCAAAGTC
GATCGCGCGGAGATCCAGTACGAACCCAATGGTCGTTCCCGCGGCACTGG
TGTGGTTCAGTTCGATAGTGCGGACACTGCGGAGACGGCTATCGGTAGGT
CTTGTGATTTAATTAGCAAGGAAGACAGCTACTAACTGCACTACAGCTAA
GTTCACCGGCTACCAGTATGGCGGTCGTCCCCTGGGCATTACGTTTGTCA
AGTACATGAACGCCGGCCCAGGGCCTGGTGATGCGATGGATGGCACCGAG
CCGACTGCTCCGATCACGCAGGATCAGATCATGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4407016..4409051+ >CAN33_49155-T1 ID=CAN33_49155-T1|Name=CAN33_49155-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=8295bp|location=Sequence derived from alignment at NKJJ01000022.1:4407016..4409051+ (Aspergillus niger FDAARGOS_311) ATGTCTCCGTCTGCCTTCGACGACACTGACCACGCACAGCGCGAGAGGTC TCGTTCTCCCCGTCGTCGTTCTCGTAGCCCTCGACGCAGCCGTCGCTCGT ACTCTCCCCGCAGTCGCTCTCGCAGCCGTGACGACTATCGCCGCTCCGAC CGTCATTCTCGTTCGCCTATGAGTACGACCCAAGGCGCTCCCGGTGGTCA TTCTGCTTCTGGTTACGGTGGGCGCGGCAGCTACCCACCTCCCCCCCGTT CGTTCGAAGATCGCGCAGTCGCCAAAGAACAAATGATGCAAGCCGTGCGC GAGTCGTCCCAGCAAGACCGTCGCGTCTATGTGGGCAACCTCTCCTACGA TGTCAAGTGGCATCATCTGAAAGACTTTATGAGACAGGGTGAGCAGGGTC ATATCGTGTTGCCGGGCGTGGGGACGTTCCGCGCTCGAACAGCTGGAGAA GTCATCTTTGCCGATGTCTTACTGCTTCCCAATGGAATGTCGAAGGTGGG CGCCAATGCGATTGTGGAATACGCGACCAGGGAACAAGCGCAAAATGCGG TAAACACCCTCAGCAACCAGAACTTGATGGGAAGACTCGTCTACGTCCGT GAGCTTCCATTCAACGTTGGCTGGCAAGACTTGAAGGATCTTTTCCGCCA AGCTGCTCAGCAGGGTGCTGTGATCCGTGCCGATGTCCACACCGATGCCA CTGGCCGTCCCAAGGGCTCTGGTATTGTCGCCTTCGAGTCCCCTGAGGAT GCCCGGAATGCCATTCAGCAGTTCAACGGATACGACTGGCAAGGACGCCA GCTGGAGGGCGTGCCCTCTGGACCTCCTAACCCGTTCACCGATTTCGCTA CTTCTGGCGGCGACAAGAGCGCTGTCATTTACGTGCGCAACCTGCCTTGG TCGACTTGCAACGAGGATCTGGTGGATCTGTTCTCGACTATTGGCAAAGT CGATCGCGCGGAGATCCAGTACGAACCCAATGGTCGTTCCCGCGGCACTG GTGTGGTTCAGTTCGATAGTGCGGACACTGCGGAGACGGCTATCGCTAAG TTCACCGGCTACCAGTATGGCGGTCGTCCCCTGGGCATTACGTTTGTCAA GTACATGAACGCCGGCCCAGGGCCTGGTGATGCGATGGATGGCACCGAGC CGACTGCTCCGATCACGCAGGATCAGATCATGTAAATGTCTCCGTCTGCC TTCGACGACACTGACCACGCACAGCGCGAGAGGTCTCGTTCTCCCCGTCG TCGTTCTCGTAGCCCTCGACGCAGCCGTCGCTCGTACTCTCCCCGCAGTC GCTCTCGCAGCCGTGACGACTATCGCCGCTCCGACCGTCATTCTCGTTCG CCTATGAGTACGACCCAAGGCGCTCCCGGTGGTCATTCTGCTTCTGGTTA CGGTGGGCGCGGCAGCTACCCACCTCCCCCCCGTTCGTTCGAAGATCGCG CAGTCGCCAAAGAACAAATGATGCAAGCCGTGCGCGAGTCGTCCCAGCAA GACCGTCGCGTCTATGTGGGCAACCTCTCCTACGATGTCAAGTGGCATCA TCTGAAAGACTTTATGAGACAGGGTGAGCAGGGTCATATCGTGTTGCCGG GCGTGGGGACGTTCCGCGCTCGAACAGCTGGAGAAGTCATCTTTGCCGAT GTCTTACTGCTTCCCAATGGAATGTCGAAGGTGGGCGCCAATGCGATTGT GGAATACGCGACCAGGGAACAAGCGCAAAATGCGGTAAACACCCTCAGCA ACCAGAACTTGATGGGAAGACTCGTCTACGTCCGTGAGCTTCCATTCAAC GTTGGCTGGCAAGACTTGAAGGATCTTTTCCGCCAAGCTGCTCAGCAGGG TGCTGTGATCCGTGCCGATGTCCACACCGATGCCACTGGCCGTCCCAAGG GCTCTGGTATTGTCGCCTTCGAGTCCCCTGAGGATGCCCGGAATGCCATT CAGCAGTTCAACGGATACGACTGGCAAGGACGCCAGCTGGAGGGCGTGCC CTCTGGACCTCCTAACCCGTTCACCGATTTCGCTACTTCTGGCGGCGACA AGAGCGCTGTCATTTACGTGCGCAACCTGCCTTGGTCGACTTGCAACGAG GATCTGGTGGATCTGTTCTCGACTATTGGCAAAGTCGATCGCGCGGAGAT CCAGTACGAACCCAATGGTCGTTCCCGCGGCACTGGTGTGGTTCAGTTCG ATAGTGCGGACACTGCGGAGACGGCTATCGCTAAGTTCACCGGCTACCAG TATGGCGGTCGTCCCCTGGGCATTACGTTTGTCAAGTACATGAACGCCGG CCCAGGGCCTGGTGATGCGATGGATGGCACCGAGCCGACTGCTCCGATCA CGCAGGATCAGATCATGTAAATGTCTCCGTCTGCCTTCGACGACACTGAC CACGCACAGCGCGAGAGGTCTCGTTCTCCCCGTCGTCGTTCTCGTAGCCC TCGACGCAGCCGTCGCTCGTACTCTCCCCGCAGTCGCTCTCGCAGCCGTG ACGACTATCGCCGCTCCGACCGTCATTCTCGTTCGCCTATGAGTACGACC CAAGGCGCTCCCGGTGGTCATTCTGCTTCTGGTTACGGTGGGCGCGGCAG CTACCCACCTCCCCCCCGTTCGTTCGAAGATCGCGCAGTCGCCAAAGAAC AAATGATGCAAGCCGTGCGCGAGTCGTCCCAGCAAGACCGTCGCGTCTAT GTGGGCAACCTCTCCTACGATGTCAAGTGGCATCATCTGAAAGACTTTAT GAGACAGGGTGAGCAGGGTCATATCGTGTTGCCGGGCGTGGGGACGTTCC GCGCTCGAACAGCTGGAGAAGTCATCTTTGCCGATGTCTTACTGCTTCCC AATGGAATGTCGAAGGTGGGCGCCAATGCGATTGTGGAATACGCGACCAG GGAACAAGCGCAAAATGCGGTAAACACCCTCAGCAACCAGAACTTGATGG GAAGACTCGTCTACGTCCGTGAGCTTCCATTCAACGTTGGCTGGCAAGAC TTGAAGGATCTTTTCCGCCAAGCTGCTCAGCAGGGTGCTGTGATCCGTGC CGATGTCCACACCGATGCCACTGGCCGTCCCAAGGGCTCTGGTATTGTCG CCTTCGAGTCCCCTGAGGATGCCCGGAATGCCATTCAGCAGTTCAACGGA TACGACTGGCAAGGACGCCAGCTGGAGGGCGTGCCCTCTGGACCTCCTAA CCCGTTCACCGATTTCGCTACTTCTGGCGGCGACAAGAGCGCTGTCATTT ACGTGCGCAACCTGCCTTGGTCGACTTGCAACGAGGATCTGGTGGATCTG TTCTCGACTATTGGCAAAGTCGATCGCGCGGAGATCCAGTACGAACCCAA TGGTCGTTCCCGCGGCACTGGTGTGGTTCAGTTCGATAGTGCGGACACTG CGGAGACGGCTATCGCTAAGTTCACCGGCTACCAGTATGGCGGTCGTCCC CTGGGCATTACGTTTGTCAAGTACATGAACGCCGGCCCAGGGCCTGGTGA TGCGATGGATGGCACCGAGCCGACTGCTCCGATCACGCAGGATCAGATCA TGTAAATGTCTCCGTCTGCCTTCGACGACACTGACCACGCACAGCGCGAG AGGTCTCGTTCTCCCCGTCGTCGTTCTCGTAGCCCTCGACGCAGCCGTCG CTCGTACTCTCCCCGCAGTCGCTCTCGCAGCCGTGACGACTATCGCCGCT CCGACCGTCATTCTCGTTCGCCTATGAGTACGACCCAAGGCGCTCCCGGT GGTCATTCTGCTTCTGGTTACGGTGGGCGCGGCAGCTACCCACCTCCCCC CCGTTCGTTCGAAGATCGCGCAGTCGCCAAAGAACAAATGATGCAAGCCG TGCGCGAGTCGTCCCAGCAAGACCGTCGCGTCTATGTGGGCAACCTCTCC TACGATGTCAAGTGGCATCATCTGAAAGACTTTATGAGACAGGGTGAGCA GGGTCATATCGTGTTGCCGGGCGTGGGGACGTTCCGCGCTCGAACAGCTG GAGAAGTCATCTTTGCCGATGTCTTACTGCTTCCCAATGGAATGTCGAAG GTGGGCGCCAATGCGATTGTGGAATACGCGACCAGGGAACAAGCGCAAAA TGCGGTAAACACCCTCAGCAACCAGAACTTGATGGGAAGACTCGTCTACG TCCGTGAGCTTCCATTCAACGTTGGCTGGCAAGACTTGAAGGATCTTTTC CGCCAAGCTGCTCAGCAGGGTGCTGTGATCCGTGCCGATGTCCACACCGA TGCCACTGGCCGTCCCAAGGGCTCTGGTATTGTCGCCTTCGAGTCCCCTG AGGATGCCCGGAATGCCATTCAGCAGTTCAACGGATACGACTGGCAAGGA CGCCAGCTGGAGGGCGTGCCCTCTGGACCTCCTAACCCGTTCACCGATTT CGCTACTTCTGGCGGCGACAAGAGCGCTGTCATTTACGTGCGCAACCTGC CTTGGTCGACTTGCAACGAGGATCTGGTGGATCTGTTCTCGACTATTGGC AAAGTCGATCGCGCGGAGATCCAGTACGAACCCAATGGTCGTTCCCGCGG CACTGGTGTGGTTCAGTTCGATAGTGCGGACACTGCGGAGACGGCTATCG CTAAGTTCACCGGCTACCAGTATGGCGGTCGTCCCCTGGGCATTACGTTT GTCAAGTACATGAACGCCGGCCCAGGGCCTGGTGATGCGATGGATGGCAC CGAGCCGACTGCTCCGATCACGCAGGATCAGATCATGTAAATGTCTCCGT CTGCCTTCGACGACACTGACCACGCACAGCGCGAGAGGTCTCGTTCTCCC CGTCGTCGTTCTCGTAGCCCTCGACGCAGCCGTCGCTCGTACTCTCCCCG CAGTCGCTCTCGCAGCCGTGACGACTATCGCCGCTCCGACCGTCATTCTC GTTCGCCTATGAGTACGACCCAAGGCGCTCCCGGTGGTCATTCTGCTTCT GGTTACGGTGGGCGCGGCAGCTACCCACCTCCCCCCCGTTCGTTCGAAGA TCGCGCAGTCGCCAAAGAACAAATGATGCAAGCCGTGCGCGAGTCGTCCC AGCAAGACCGTCGCGTCTATGTGGGCAACCTCTCCTACGATGTCAAGTGG CATCATCTGAAAGACTTTATGAGACAGGGTGAGCAGGGTCATATCGTGTT GCCGGGCGTGGGGACGTTCCGCGCTCGAACAGCTGGAGAAGTCATCTTTG CCGATGTCTTACTGCTTCCCAATGGAATGTCGAAGGTGGGCGCCAATGCG ATTGTGGAATACGCGACCAGGGAACAAGCGCAAAATGCGGTAAACACCCT CAGCAACCAGAACTTGATGGGAAGACTCGTCTACGTCCGTGAGCTTCCAT TCAACGTTGGCTGGCAAGACTTGAAGGATCTTTTCCGCCAAGCTGCTCAG CAGGGTGCTGTGATCCGTGCCGATGTCCACACCGATGCCACTGGCCGTCC CAAGGGCTCTGGTATTGTCGCCTTCGAGTCCCCTGAGGATGCCCGGAATG CCATTCAGCAGTTCAACGGATACGACTGGCAAGGACGCCAGCTGGAGGGC GTGCCCTCTGGACCTCCTAACCCGTTCACCGATTTCGCTACTTCTGGCGG CGACAAGAGCGCTGTCATTTACGTGCGCAACCTGCCTTGGTCGACTTGCA ACGAGGATCTGGTGGATCTGTTCTCGACTATTGGCAAAGTCGATCGCGCG GAGATCCAGTACGAACCCAATGGTCGTTCCCGCGGCACTGGTGTGGTTCA GTTCGATAGTGCGGACACTGCGGAGACGGCTATCGCTAAGTTCACCGGCT ACCAGTATGGCGGTCGTCCCCTGGGCATTACGTTTGTCAAGTACATGAAC GCCGGCCCAGGGCCTGGTGATGCGATGGATGGCACCGAGCCGACTGCTCC GATCACGCAGGATCAGATCATGTAAATGTCTCCGTCTGCCTTCGACGACA CTGACCACGCACAGCGCGAGAGGTCTCGTTCTCCCCGTCGTCGTTCTCGT AGCCCTCGACGCAGCCGTCGCTCGTACTCTCCCCGCAGTCGCTCTCGCAG CCGTGACGACTATCGCCGCTCCGACCGTCATTCTCGTTCGCCTATGAGTA CGACCCAAGGCGCTCCCGGTGGTCATTCTGCTTCTGGTTACGGTGGGCGC GGCAGCTACCCACCTCCCCCCCGTTCGTTCGAAGATCGCGCAGTCGCCAA AGAACAAATGATGCAAGCCGTGCGCGAGTCGTCCCAGCAAGACCGTCGCG TCTATGTGGGCAACCTCTCCTACGATGTCAAGTGGCATCATCTGAAAGAC TTTATGAGACAGGGTGAGCAGGGTCATATCGTGTTGCCGGGCGTGGGGAC GTTCCGCGCTCGAACAGCTGGAGAAGTCATCTTTGCCGATGTCTTACTGC TTCCCAATGGAATGTCGAAGGTGGGCGCCAATGCGATTGTGGAATACGCG ACCAGGGAACAAGCGCAAAATGCGGTAAACACCCTCAGCAACCAGAACTT GATGGGAAGACTCGTCTACGTCCGTGAGCTTCCATTCAACGTTGGCTGGC AAGACTTGAAGGATCTTTTCCGCCAAGCTGCTCAGCAGGGTGCTGTGATC CGTGCCGATGTCCACACCGATGCCACTGGCCGTCCCAAGGGCTCTGGTAT TGTCGCCTTCGAGTCCCCTGAGGATGCCCGGAATGCCATTCAGCAGTTCA ACGGATACGACTGGCAAGGACGCCAGCTGGAGGGCGTGCCCTCTGGACCT CCTAACCCGTTCACCGATTTCGCTACTTCTGGCGGCGACAAGAGCGCTGT CATTTACGTGCGCAACCTGCCTTGGTCGACTTGCAACGAGGATCTGGTGG ATCTGTTCTCGACTATTGGCAAAGTCGATCGCGCGGAGATCCAGTACGAA CCCAATGGTCGTTCCCGCGGCACTGGTGTGGTTCAGTTCGATAGTGCGGA CACTGCGGAGACGGCTATCGCTAAGTTCACCGGCTACCAGTATGGCGGTC GTCCCCTGGGCATTACGTTTGTCAAGTACATGAACGCCGGCCCAGGGCCT GGTGATGCGATGGATGGCACCGAGCCGACTGCTCCGATCACGCAGGATCA GATCATGTAAATGTCTCCGTCTGCCTTCGACGACACTGACCACGCACAGC GCGAGAGGTCTCGTTCTCCCCGTCGTCGTTCTCGTAGCCCTCGACGCAGC CGTCGCTCGTACTCTCCCCGCAGTCGCTCTCGCAGCCGTGACGACTATCG CCGCTCCGACCGTCATTCTCGTTCGCCTATGAGTACGACCCAAGGCGCTC CCGGTGGTCATTCTGCTTCTGGTTACGGTGGGCGCGGCAGCTACCCACCT CCCCCCCGTTCGTTCGAAGATCGCGCAGTCGCCAAAGAACAAATGATGCA AGCCGTGCGCGAGTCGTCCCAGCAAGACCGTCGCGTCTATGTGGGCAACC TCTCCTACGATGTCAAGTGGCATCATCTGAAAGACTTTATGAGACAGGGT GAGCAGGGTCATATCGTGTTGCCGGGCGTGGGGACGTTCCGCGCTCGAAC AGCTGGAGAAGTCATCTTTGCCGATGTCTTACTGCTTCCCAATGGAATGT CGAAGGTGGGCGCCAATGCGATTGTGGAATACGCGACCAGGGAACAAGCG CAAAATGCGGTAAACACCCTCAGCAACCAGAACTTGATGGGAAGACTCGT CTACGTCCGTGAGCTTCCATTCAACGTTGGCTGGCAAGACTTGAAGGATC TTTTCCGCCAAGCTGCTCAGCAGGGTGCTGTGATCCGTGCCGATGTCCAC ACCGATGCCACTGGCCGTCCCAAGGGCTCTGGTATTGTCGCCTTCGAGTC CCCTGAGGATGCCCGGAATGCCATTCAGCAGTTCAACGGATACGACTGGC AAGGACGCCAGCTGGAGGGCGTGCCCTCTGGACCTCCTAACCCGTTCACC GATTTCGCTACTTCTGGCGGCGACAAGAGCGCTGTCATTTACGTGCGCAA CCTGCCTTGGTCGACTTGCAACGAGGATCTGGTGGATCTGTTCTCGACTA TTGGCAAAGTCGATCGCGCGGAGATCCAGTACGAACCCAATGGTCGTTCC CGCGGCACTGGTGTGGTTCAGTTCGATAGTGCGGACACTGCGGAGACGGC TATCGCTAAGTTCACCGGCTACCAGTATGGCGGTCGTCCCCTGGGCATTA CGTTTGTCAAGTACATGAACGCCGGCCCAGGGCCTGGTGATGCGATGGAT GGCACCGAGCCGACTGCTCCGATCACGCAGGATCAGATCATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF13893 |
| DBxref | PFAM:PF00076 |
| Product | RNA recognition motif family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4407016..4409051 + |
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