CAN33_49565-T1, CAN33_49565-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_49565-T1
Unique Name	CAN33_49565-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4668885..4670396+
coding sequence from alignment at NKJJ01000022.1:4668885..4670396+

mRNA from alignment at NKJJ01000022.1:4668885..4670396+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_49565-T1 ID=CAN33_49565-T1|Name=CAN33_49565-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1512bp|location=Sequence derived from alignment at NKJJ01000022.1:4668885..4670396+ (Aspergillus niger FDAARGOS_311)
ATGTTATCGCGAACAGCACCCCAACTCCGGGGCCCCATTGCCCGCACTCC
ACGCGCCATCAGAACCACATCTACAATACACTCCTTTCCTACATACAACA
CGCTTCGAATTGCATCGCACAAAGCCGTCGCATTACGGAAGTTATGGACA
CCCTTTTCATCATCGCAGCAACCGCGCGCCTTCAGCGTGTCGGCACTTCG
TACAGCAGAAACACGAGTCATTAATGTCCCTGCCATGGCGGAATCTATCT
CCGAGGGTGTCCTCGCCACATTTCACAAGCAGGTTGGGGATTTTGTGGAG
CTAGATGAAGAGATCGCTTCTATTGAGACGGACAAAATTGACGTCCCTAT
CATTGCGTCTGAGAGCGGCACCATTGCGAAACTATTTGTTAACGAGGGTG
ATACGGTGACGGTCGGACAGGCGGTTATTGTGATCTCTCTCGACAAGCGC
GATGCGCCGCAACCTGCTGAGTCTCAATTTGCTCCAGAGGCTGCTAAGGA
ATTAAAGGAAGGTCAGCCCGTTCCTGCTTCTGTGTCTTCATCAGAGACAA
AAATTGAGCCGAAGAAAGAATCTACTGCGCCACCTGTGTCATCGAAACCT
GCTGCACCTGCCACCAGCGCTCAAGGGCCCGTGTCAGCTTACAAGGGCAG
TCGTGCAGAACGCCGAGTACGTAATCTTGCGCAGCTCCACCTTCTAGATG
AAATGCTGAATGCGATATAGGAGAAATTGACCCGCATGCGCCTCCGCACT
GCAGAGCGCCTCAAGCAGTCCCAAAACACAGCCGCCTTTCTCACTACCTT
TAATGAAGTCGACATGTCCAAGGTGATGGAGTTCCGGGCACAGATCAAAG
ACGATGTACTTCAAAAACATGGCGTCAAGCTCGGCTTCATGGGTCCAGTT
GCCCGTGCGTCTGCGCTCGCGTTGAAGGAGATCCCGGCTATTAATGCTTC
CATTGAGAATGATGATACTATTGTGTTCAGGGATTATATTGATCTCAGCG
TTGCTGTTGCGACACCAAAGGGATTGGTTACGCCGGTGTTGAGGAATATG
GAGAGTTTGAGTGTGGTGGGGATTGAGAAGGGGATTGCTGAGCTCGGAAA
GAAGGTATAAGTTCTGAATAGACAATCTCCGTGGGGGTATACGTAGCTAA
CTCTTACAGGCACGCGATGGAAAATTGACCATGGACGACTTGTCCGGAGG
CTCTTTCACGATTAGTAACAGTGGGATTTGGGGATCGCTCTTTGGTACGC
CTATTATCAATGTGCCACAGACGGCTGTTCTGGGTATCTATGGAATTCAG
CAAAGACCTGTTGCTATTGATGGACAGGTCGAAATTCGGCCGGTAGGCTC
AATTATGTGACTTGGTATTCAATTCTTGCTGATCAATTCATCTAGATGAT
GTATACTGCTCTGACATATGATCATCGGCTGGTGGACGGTCGTGAAGCGG
TTATTTTCCTGACCTTGGTGAAGAAGTACCTTGAGGACCCGACGAGCATG
CTGATTGAGTAA

Coding sequence (CDS) from alignment at NKJJ01000022.1:4668885..4670396+

>CAN33_49565-T1 ID=CAN33_49565-T1|Name=CAN33_49565-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5400bp|location=Sequence derived from alignment at NKJJ01000022.1:4668885..4670396+ (Aspergillus niger FDAARGOS_311)
ATGTTATCGCGAACAGCACCCCAACTCCGGGGCCCCATTGCCCGCACTCC
ACGCGCCATCAGAACCACATCTACAATACACTCCTTTCCTACATACAACA
CGCTTCGAATTGCATCGCACAAAGCCGTCGCATTACGGAAGTTATGGACA
CCCTTTTCATCATCGCAGCAACCGCGCGCCTTCAGCGTGTCGGCACTTCG
TACAGCAGAAACACGAGTCATTAATGTCCCTGCCATGGCGGAATCTATCT
CCGAGGGTGTCCTCGCCACATTTCACAAGCAGGTTGGGGATTTTGTGGAG
CTAGATGAAGAGATCGCTTCTATTGAGACGGACAAAATTGACGTCCCTAT
CATTGCGTCTGAGAGCGGCACCATTGCGAAACTATTTGTTAACGAGGGTG
ATACGGTGACGGTCGGACAGGCGGTTATTGTGATCTCTCTCGACAAGCGC
GATGCGCCGCAACCTGCTGAGTCTCAATTTGCTCCAGAGGCTGCTAAGGA
ATTAAAGGAAGGTCAGCCCGTTCCTGCTTCTGTGTCTTCATCAGAGACAA
AAATTGAGCCGAAGAAAGAATCTACTGCGCCACCTGTGTCATCGAAACCT
GCTGCACCTGCCACCAGCGCTCAAGGGCCCGTGTCAGCTTACAAGGGCAG
TCGTGCAGAACGCCGAGAGAAATTGACCCGCATGCGCCTCCGCACTGCAG
AGCGCCTCAAGCAGTCCCAAAACACAGCCGCCTTTCTCACTACCTTTAAT
GAAGTCGACATGTCCAAGGTGATGGAGTTCCGGGCACAGATCAAAGACGA
TGTACTTCAAAAACATGGCGTCAAGCTCGGCTTCATGGGTCCAGTTGCCC
GTGCGTCTGCGCTCGCGTTGAAGGAGATCCCGGCTATTAATGCTTCCATT
GAGAATGATGATACTATTGTGTTCAGGGATTATATTGATCTCAGCGTTGC
TGTTGCGACACCAAAGGGATTGGTTACGCCGGTGTTGAGGAATATGGAGA
GTTTGAGTGTGGTGGGGATTGAGAAGGGGATTGCTGAGCTCGGAAAGAAG
GCACGCGATGGAAAATTGACCATGGACGACTTGTCCGGAGGCTCTTTCAC
GATTAGTAACAGTGGGATTTGGGGATCGCTCTTTGGTACGCCTATTATCA
ATGTGCCACAGACGGCTGTTCTGGGTATCTATGGAATTCAGCAAAGACCT
GTTGCTATTGATGGACAGGTCGAAATTCGGCCGATGATGTATACTGCTCT
GACATATGATCATCGGCTGGTGGACGGTCGTGAAGCGGTTATTTTCCTGA
CCTTGGTGAAGAAGTACCTTGAGGACCCGACGAGCATGCTGATTGAGTAA
ATGTTATCGCGAACAGCACCCCAACTCCGGGGCCCCATTGCCCGCACTCC
ACGCGCCATCAGAACCACATCTACAATACACTCCTTTCCTACATACAACA
CGCTTCGAATTGCATCGCACAAAGCCGTCGCATTACGGAAGTTATGGACA
CCCTTTTCATCATCGCAGCAACCGCGCGCCTTCAGCGTGTCGGCACTTCG
TACAGCAGAAACACGAGTCATTAATGTCCCTGCCATGGCGGAATCTATCT
CCGAGGGTGTCCTCGCCACATTTCACAAGCAGGTTGGGGATTTTGTGGAG
CTAGATGAAGAGATCGCTTCTATTGAGACGGACAAAATTGACGTCCCTAT
CATTGCGTCTGAGAGCGGCACCATTGCGAAACTATTTGTTAACGAGGGTG
ATACGGTGACGGTCGGACAGGCGGTTATTGTGATCTCTCTCGACAAGCGC
GATGCGCCGCAACCTGCTGAGTCTCAATTTGCTCCAGAGGCTGCTAAGGA
ATTAAAGGAAGGTCAGCCCGTTCCTGCTTCTGTGTCTTCATCAGAGACAA
AAATTGAGCCGAAGAAAGAATCTACTGCGCCACCTGTGTCATCGAAACCT
GCTGCACCTGCCACCAGCGCTCAAGGGCCCGTGTCAGCTTACAAGGGCAG
TCGTGCAGAACGCCGAGAGAAATTGACCCGCATGCGCCTCCGCACTGCAG
AGCGCCTCAAGCAGTCCCAAAACACAGCCGCCTTTCTCACTACCTTTAAT
GAAGTCGACATGTCCAAGGTGATGGAGTTCCGGGCACAGATCAAAGACGA
TGTACTTCAAAAACATGGCGTCAAGCTCGGCTTCATGGGTCCAGTTGCCC
GTGCGTCTGCGCTCGCGTTGAAGGAGATCCCGGCTATTAATGCTTCCATT
GAGAATGATGATACTATTGTGTTCAGGGATTATATTGATCTCAGCGTTGC
TGTTGCGACACCAAAGGGATTGGTTACGCCGGTGTTGAGGAATATGGAGA
GTTTGAGTGTGGTGGGGATTGAGAAGGGGATTGCTGAGCTCGGAAAGAAG
GCACGCGATGGAAAATTGACCATGGACGACTTGTCCGGAGGCTCTTTCAC
GATTAGTAACAGTGGGATTTGGGGATCGCTCTTTGGTACGCCTATTATCA
ATGTGCCACAGACGGCTGTTCTGGGTATCTATGGAATTCAGCAAAGACCT
GTTGCTATTGATGGACAGGTCGAAATTCGGCCGATGATGTATACTGCTCT
GACATATGATCATCGGCTGGTGGACGGTCGTGAAGCGGTTATTTTCCTGA
CCTTGGTGAAGAAGTACCTTGAGGACCCGACGAGCATGCTGATTGAGTAA
ATGTTATCGCGAACAGCACCCCAACTCCGGGGCCCCATTGCCCGCACTCC
ACGCGCCATCAGAACCACATCTACAATACACTCCTTTCCTACATACAACA
CGCTTCGAATTGCATCGCACAAAGCCGTCGCATTACGGAAGTTATGGACA
CCCTTTTCATCATCGCAGCAACCGCGCGCCTTCAGCGTGTCGGCACTTCG
TACAGCAGAAACACGAGTCATTAATGTCCCTGCCATGGCGGAATCTATCT
CCGAGGGTGTCCTCGCCACATTTCACAAGCAGGTTGGGGATTTTGTGGAG
CTAGATGAAGAGATCGCTTCTATTGAGACGGACAAAATTGACGTCCCTAT
CATTGCGTCTGAGAGCGGCACCATTGCGAAACTATTTGTTAACGAGGGTG
ATACGGTGACGGTCGGACAGGCGGTTATTGTGATCTCTCTCGACAAGCGC
GATGCGCCGCAACCTGCTGAGTCTCAATTTGCTCCAGAGGCTGCTAAGGA
ATTAAAGGAAGGTCAGCCCGTTCCTGCTTCTGTGTCTTCATCAGAGACAA
AAATTGAGCCGAAGAAAGAATCTACTGCGCCACCTGTGTCATCGAAACCT
GCTGCACCTGCCACCAGCGCTCAAGGGCCCGTGTCAGCTTACAAGGGCAG
TCGTGCAGAACGCCGAGAGAAATTGACCCGCATGCGCCTCCGCACTGCAG
AGCGCCTCAAGCAGTCCCAAAACACAGCCGCCTTTCTCACTACCTTTAAT
GAAGTCGACATGTCCAAGGTGATGGAGTTCCGGGCACAGATCAAAGACGA
TGTACTTCAAAAACATGGCGTCAAGCTCGGCTTCATGGGTCCAGTTGCCC
GTGCGTCTGCGCTCGCGTTGAAGGAGATCCCGGCTATTAATGCTTCCATT
GAGAATGATGATACTATTGTGTTCAGGGATTATATTGATCTCAGCGTTGC
TGTTGCGACACCAAAGGGATTGGTTACGCCGGTGTTGAGGAATATGGAGA
GTTTGAGTGTGGTGGGGATTGAGAAGGGGATTGCTGAGCTCGGAAAGAAG
GCACGCGATGGAAAATTGACCATGGACGACTTGTCCGGAGGCTCTTTCAC
GATTAGTAACAGTGGGATTTGGGGATCGCTCTTTGGTACGCCTATTATCA
ATGTGCCACAGACGGCTGTTCTGGGTATCTATGGAATTCAGCAAAGACCT
GTTGCTATTGATGGACAGGTCGAAATTCGGCCGATGATGTATACTGCTCT
GACATATGATCATCGGCTGGTGGACGGTCGTGAAGCGGTTATTTTCCTGA
CCTTGGTGAAGAAGTACCTTGAGGACCCGACGAGCATGCTGATTGAGTAA
ATGTTATCGCGAACAGCACCCCAACTCCGGGGCCCCATTGCCCGCACTCC
ACGCGCCATCAGAACCACATCTACAATACACTCCTTTCCTACATACAACA
CGCTTCGAATTGCATCGCACAAAGCCGTCGCATTACGGAAGTTATGGACA
CCCTTTTCATCATCGCAGCAACCGCGCGCCTTCAGCGTGTCGGCACTTCG
TACAGCAGAAACACGAGTCATTAATGTCCCTGCCATGGCGGAATCTATCT
CCGAGGGTGTCCTCGCCACATTTCACAAGCAGGTTGGGGATTTTGTGGAG
CTAGATGAAGAGATCGCTTCTATTGAGACGGACAAAATTGACGTCCCTAT
CATTGCGTCTGAGAGCGGCACCATTGCGAAACTATTTGTTAACGAGGGTG
ATACGGTGACGGTCGGACAGGCGGTTATTGTGATCTCTCTCGACAAGCGC
GATGCGCCGCAACCTGCTGAGTCTCAATTTGCTCCAGAGGCTGCTAAGGA
ATTAAAGGAAGGTCAGCCCGTTCCTGCTTCTGTGTCTTCATCAGAGACAA
AAATTGAGCCGAAGAAAGAATCTACTGCGCCACCTGTGTCATCGAAACCT
GCTGCACCTGCCACCAGCGCTCAAGGGCCCGTGTCAGCTTACAAGGGCAG
TCGTGCAGAACGCCGAGAGAAATTGACCCGCATGCGCCTCCGCACTGCAG
AGCGCCTCAAGCAGTCCCAAAACACAGCCGCCTTTCTCACTACCTTTAAT
GAAGTCGACATGTCCAAGGTGATGGAGTTCCGGGCACAGATCAAAGACGA
TGTACTTCAAAAACATGGCGTCAAGCTCGGCTTCATGGGTCCAGTTGCCC
GTGCGTCTGCGCTCGCGTTGAAGGAGATCCCGGCTATTAATGCTTCCATT
GAGAATGATGATACTATTGTGTTCAGGGATTATATTGATCTCAGCGTTGC
TGTTGCGACACCAAAGGGATTGGTTACGCCGGTGTTGAGGAATATGGAGA
GTTTGAGTGTGGTGGGGATTGAGAAGGGGATTGCTGAGCTCGGAAAGAAG
GCACGCGATGGAAAATTGACCATGGACGACTTGTCCGGAGGCTCTTTCAC
GATTAGTAACAGTGGGATTTGGGGATCGCTCTTTGGTACGCCTATTATCA
ATGTGCCACAGACGGCTGTTCTGGGTATCTATGGAATTCAGCAAAGACCT
GTTGCTATTGATGGACAGGTCGAAATTCGGCCGATGATGTATACTGCTCT
GACATATGATCATCGGCTGGTGGACGGTCGTGAAGCGGTTATTTTCCTGA
CCTTGGTGAAGAAGTACCTTGAGGACCCGACGAGCATGCTGATTGAGTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0045252	oxoglutarate dehydrogenase complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006099	tricarboxylic acid cycle

Vocabulary: **Molecular Function**
Term	Definition
GO:0004149	dihydrolipoyllysine-residue succinyltransferase activity
GO:0016746	transferase activity, transferring acyl groups

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_49565	CAN33_49565	Aspergillus niger FDAARGOS_311	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_49565-T1.exon1	CAN33_49565-T1.exon1	Aspergillus niger FDAARGOS_311	exon
CAN33_49565-T1.exon2	CAN33_49565-T1.exon2	Aspergillus niger FDAARGOS_311	exon
CAN33_49565-T1.exon3	CAN33_49565-T1.exon3	Aspergillus niger FDAARGOS_311	exon
CAN33_49565-T1.exon4	CAN33_49565-T1.exon4	Aspergillus niger FDAARGOS_311	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_49565-T1.cds	CAN33_49565-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_49565-T1	CAN33_49565-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

Properties


Property Name	Value
Note	antiSMASH:Cluster_10000221.12
DBxref	InterPro:IPR011053
DBxref	InterPro:IPR003016
DBxref	InterPro:IPR000089
DBxref	InterPro:IPR006255
DBxref	InterPro:IPR023213
DBxref	InterPro:IPR001078
DBxref	PFAM:PF00364
DBxref	PFAM:PF00198
Product	dihydrolipoyllysine-residue succinyltransferase E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000022.1	supercontig	NKJJ01000022.1:4668885..4670396 +

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CAN33_49565-T1, CAN33_49565-T1 (mRNA) Aspergillus niger FDAARGOS_311