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CAN33_49870-T1, CAN33_49870-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_49870-T1
Unique NameCAN33_49870-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4844077..4847042-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_49870-T1 ID=CAN33_49870-T1|Name=CAN33_49870-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2966bp|location=Sequence derived from alignment at NKJJ01000022.1:4844077..4847042- (Aspergillus niger FDAARGOS_311)
ATGGCTCTTTCGCAGGTTCCAAGTCTAGTGCACGGAAGACTGCCTTCTTC
CTTGGAGGAACCAGACGAGGAGGGAATCTGGACTCCCCTCCAGCTGGCCG
CCGCACAAGGCAACCTACCCGAAGTGAAGGCTCTTTTGTCTCAGCCATCA
AGCAACCCCAACGAGCCTCCCAGAGGTTACTACGGCCAGACTGCACTCCA
GGCGGCCTCGCTCAACGGTCATCTTGATGTGGTCGAAACGCTCTTAGCCG
CTGGGGCCGATGTGAATGCTCCCGGGGGCAACAACGGCGGCCGAACCGCC
CTCACCCTCGCCGCAGGTGCCGGCCACTTCCAGATCGTTCGCCATCTAGT
CATCGCCGCAGGTGCGGACGTCAAGCAGCCAGCCCACAAATACGTGGGGC
GCACCGCCCTGCAGGCCGCTGCGGAGGGAGGCCATCTCGAGATCTTACAG
TGGCTGTTACAACACCAGCCGGTTACGGAAATCAACGCGCCCCCCGCGAA
CAACCGGGGTCGGACCGTGCTGCAGGCCGCAGCGTTTGGTGGCTATGATG
ACATGGTAGAGTTTTTACTTCATGTCGGTGCGGACGTGAATGCACCACCC
TGCAGATACCATGGCGTTACAGCGCTTCAGGGCGCGGCCTTCAACGGTCA
CCGCACCACCGTCCTTCGACTCTTGACGGCCGGGGCGGATGTGAACGCTC
CCGGGGGCCGGTACAATGGCTACACGGCGCTGGCAGCAGCAGCAGAAGGC
GGCCATGCGGACATTGTGCGACTCTTGTTGGACGCCGGCGCAGATGTCGC
CATGGTATCCGGAAATAAAAATTGGACAGCGTTGCGGTTTGCGGTGTGGC
GGGGACAGAAAGAGATCGTGCGGCTTTTGAACTAGTTGATGGGACGTATT
GCGAGGTATGATGAACGAATTGATGATAATTCAGAGAACAAAGGGGGGAA
GCAGGCTACTAGATGGCATTGAGACATAAGATAGATACGCCTTCAGTCAG
TTATCTGTATTTACAGTAGAATACAAGATGACAAGACTTGATTCCAAATA
AGAACTTTCGTGATGTTTCTTCTTCGTGCACTTGGTGCTGGTGACCATGA
TTGACATTTGGTTTGCTAATTAGACAAATATCCCACACTCAGGATCACGG
TTCACGCTAGCAGCGGTGAAGTGTTCCAAATGTGATAGGCTATTACCTGT
TAGGATATGCAGGATGTATGCAGCACGGTTGCATATAGGATACAATAGAC
GTATGCATTACCTGACGTAACAATGAGAATTATTCCCACTTTCATCAATT
TATTTCATATATTATTGAACGGGCCCATTCGGTAGACACTGTATTGCTAT
ATCTCTAGTGCTTGGGCTGATTTGCTTCGCAATCTCCATAGTTATATGGA
GCATGGATAAAAGAGTGACCTAAGACTTCTGTTTTGCTTTTTCCGCAGAC
CGGTCAATCGTAAATATATGAATACAATTTGCACATATAGTAGGAGATTT
GCAATTTCAATGGGATATAACTGTTGGCACGGAAGCTGTGGATAGCTCTC
AGTCAGTCCAAGGAGCTTTCGGCCACCCAGAGTGGTGGAGGAGCAATCTC
AGATCATCCAACTTTGTCCTCGATTCTCTTATTGTTCGTGAACATACGAG
AAACTCCGATAAGTTATCCCGTAGAACAATACGGTATATCGTGGTATCAG
TGTGATTTCATAGTGGTGCTGGATATTGGACGAATCAGTTCACCGCAGTG
AAGACTACATGATCTTACTGCCAACAGTAGGCATGCTGGCGATGCGTCAG
CGACACTACTGCACAGGACTTATGAAAGTATCGTCTACATAAAGACCGTT
TGTGCCCTTTGTTCAGTTGGTCTTCTCTCTCCAGATAGATCTCGTGCTCT
GGTATTTCCAACCATAGTCCAAAATGGAGTTTTCCAAGTTGCTCGACTTG
GAAAATTACCCTTTTCAGTATTCTTACCCTTGCGATCCAAAACACTCGCC
ACCCGACAGATTCTTTAGCCAGCTTCCCTTCCGCACCTCAAGGTTAAGAG
ATGACTTTGTGGAACTTTCTGCAAGCTACGATGGCGATCTGGAAGGACAT
GATATTTCAGGGAGGGGTCATTACATGCATTGGTTGATGCCTGAGTGCCC
GCCGAGCTTGGCTGATGCTGTATTGAAAATATGTGATGCGAGTATCTTGT
GGAATGGTGTGTCCAAACTTGAAAACCTTCTGACAGCCAACGATTATGCT
AATAATTAGACCGAACGGGAATGGTTTCCGGACTTGTAGGTGATAGGGAC
ATCAACGTCGAATAACAAAGACTGAGAGCACATAGTCCGATCAGCATACA
GCGGATATACAGCTCGCCCTTATCTCCCTCTTCAAACTAGGAAAGCCTGT
TGTCGTTCCTGGATTGGAAGATATGGAGGCTGGATTACAACATTTTGCTT
CCCTTGACAAGTCATACCTCGAGGACGTTTCCAGTCGCATTCACGAATTT
ACTAAGGCTCGAAGTTTGCCTATTGATAACCTCACACTTGACGCTTACAT
AGAACAACGGAGCATTGGTTTTGGGTTGAGGTTCGCTTGTTACCTTCGCA
TTTCATGAATTGGGGCTAATCGTATCAGCGTCATGGTCCCCTGGCTCCGT
GCTGCCCACGAAATCGAGATTTCTAAGGAGGAAGAAAAATCCATCATGCA
AATAATCAAAAAGGGTAGTTCTGTTTCGGCACTGACGAATGACTACTACA
GTTTTCATAAGGAGTATGACGACGCAATTGGAACTGGACAATCGCCCAAG
CCATATAATGCAATTGGCGTTCTGATGTGTGACTACGCATATTCCGAAGA
CGAAGCATTTCAAATCCTAAAACGGGAGATTCTCGCTCAGGAAGTTCAGC
TTATGGAAATGGTTAGTATTTGGCTATCTGCTGAGCAGAGATCAGAGGAT
TTGCGAAAGTTAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4844077..4847042-

>CAN33_49870-T1 ID=CAN33_49870-T1|Name=CAN33_49870-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5340bp|location=Sequence derived from alignment at NKJJ01000022.1:4844077..4847042- (Aspergillus niger FDAARGOS_311)
TGACGTCATGGTCCCCTGGCTCCGTGCTGCCCACGAAATCGAGATTTCTA
AGGAGGAAGAAAAATCCATCATGCAAATAATCAAAAAGGGTAGTTCTGTT
TCGGCACTGACGAATGACTACTACAGTTTTCATAAGGAGTATGACGACGC
AATTGGAACTGGACAATCGCCCAAGCCATATAATGCAATTGGCGTTCTGA
TGTGTGACTACGCATATTCCGAAGACGAAGCATTTCAAATCCTAAAACGG
GAGATTCTCGCTCAGGAAGTTCAGCTTATGGAAATGTCCGATCAGCATAC
AGCGGATATACAGCTCGCCCTTATCTCCCTCTTCAAACTAGGAAAGCCTG
TTGTCGTTCCTGGATTGGAAGATATGGAGGCTGGATTACAACATTTTGCT
TCCCTTGACAAGTCATACCTCGAGGACGTTTCCAGTCGCATTCACGAATT
TACTAAGGCTCGAAGTTTGCCTATTGATAACCTCACACTTGACGCTTACA
TAGAACAACGGAGCATTGGTTTTGGGTTGAGATGGCTCTTTCGCAGGTTC
CAAGTCTAGTGCACGGAAGACTGCCTTCTTCCTTGGAGGAACCAGACGAG
GAGGGAATCTGGACTCCCCTCCAGCTGGCCGCCGCACAAGGCAACCTACC
CGAAGTGAAGGCTCTTTTGTCTCAGCCATCAAGCAACCCCAACGAGCCTC
CCAGAGGTTACTACGGCCAGACTGCACTCCAGGCGGCCTCGCTCAACGGT
CATCTTGATGTGGTCGAAACGCTCTTAGCCGCTGGGGCCGATGTGAATGC
TCCCGGGGGCAACAACGGCGGCCGAACCGCCCTCACCCTCGCCGCAGGTG
CCGGCCACTTCCAGATCGTTCGCCATCTAGTCATCGCCGCAGGTGCGGAC
GTCAAGCAGCCAGCCCACAAATACGTGGGGCGCACCGCCCTGCAGGCCGC
TGCGGAGGGAGGCCATCTCGAGATCTTACAGTGGCTGTTACAACACCAGC
CGGTTACGGAAATCAACGCGCCCCCCGCGAACAACCGGGGTCGGACCGTG
CTGCAGGCCGCAGCGTTTGGTGGCTATGATGACATGGTAGAGTTTTTACT
TCATGTCGGTGCGGACGTGAATGCACCACCCTGCAGATACCATGGCGTTA
CAGCGCTTCAGGGCGCGGCCTTCAACGGTCACCGCACCACCGTCCTTCGA
CTCTTGACGGCCGGGGCGGATGTGAACGCTCCCGGGGGCCGGTACAATGG
CTACACGGCGCTGGCAGCAGCAGCAGAAGGCGGCCATGCGGACATTGTGC
GACTCTTGTTGGACGCCGGCGCAGATGTCGCCATGTGACGTCATGGTCCC
CTGGCTCCGTGCTGCCCACGAAATCGAGATTTCTAAGGAGGAAGAAAAAT
CCATCATGCAAATAATCAAAAAGGGTAGTTCTGTTTCGGCACTGACGAAT
GACTACTACAGTTTTCATAAGGAGTATGACGACGCAATTGGAACTGGACA
ATCGCCCAAGCCATATAATGCAATTGGCGTTCTGATGTGTGACTACGCAT
ATTCCGAAGACGAAGCATTTCAAATCCTAAAACGGGAGATTCTCGCTCAG
GAAGTTCAGCTTATGGAAATGTCCGATCAGCATACAGCGGATATACAGCT
CGCCCTTATCTCCCTCTTCAAACTAGGAAAGCCTGTTGTCGTTCCTGGAT
TGGAAGATATGGAGGCTGGATTACAACATTTTGCTTCCCTTGACAAGTCA
TACCTCGAGGACGTTTCCAGTCGCATTCACGAATTTACTAAGGCTCGAAG
TTTGCCTATTGATAACCTCACACTTGACGCTTACATAGAACAACGGAGCA
TTGGTTTTGGGTTGAGATGGCTCTTTCGCAGGTTCCAAGTCTAGTGCACG
GAAGACTGCCTTCTTCCTTGGAGGAACCAGACGAGGAGGGAATCTGGACT
CCCCTCCAGCTGGCCGCCGCACAAGGCAACCTACCCGAAGTGAAGGCTCT
TTTGTCTCAGCCATCAAGCAACCCCAACGAGCCTCCCAGAGGTTACTACG
GCCAGACTGCACTCCAGGCGGCCTCGCTCAACGGTCATCTTGATGTGGTC
GAAACGCTCTTAGCCGCTGGGGCCGATGTGAATGCTCCCGGGGGCAACAA
CGGCGGCCGAACCGCCCTCACCCTCGCCGCAGGTGCCGGCCACTTCCAGA
TCGTTCGCCATCTAGTCATCGCCGCAGGTGCGGACGTCAAGCAGCCAGCC
CACAAATACGTGGGGCGCACCGCCCTGCAGGCCGCTGCGGAGGGAGGCCA
TCTCGAGATCTTACAGTGGCTGTTACAACACCAGCCGGTTACGGAAATCA
ACGCGCCCCCCGCGAACAACCGGGGTCGGACCGTGCTGCAGGCCGCAGCG
TTTGGTGGCTATGATGACATGGTAGAGTTTTTACTTCATGTCGGTGCGGA
CGTGAATGCACCACCCTGCAGATACCATGGCGTTACAGCGCTTCAGGGCG
CGGCCTTCAACGGTCACCGCACCACCGTCCTTCGACTCTTGACGGCCGGG
GCGGATGTGAACGCTCCCGGGGGCCGGTACAATGGCTACACGGCGCTGGC
AGCAGCAGCAGAAGGCGGCCATGCGGACATTGTGCGACTCTTGTTGGACG
CCGGCGCAGATGTCGCCATGTGACGTCATGGTCCCCTGGCTCCGTGCTGC
CCACGAAATCGAGATTTCTAAGGAGGAAGAAAAATCCATCATGCAAATAA
TCAAAAAGGGTAGTTCTGTTTCGGCACTGACGAATGACTACTACAGTTTT
CATAAGGAGTATGACGACGCAATTGGAACTGGACAATCGCCCAAGCCATA
TAATGCAATTGGCGTTCTGATGTGTGACTACGCATATTCCGAAGACGAAG
CATTTCAAATCCTAAAACGGGAGATTCTCGCTCAGGAAGTTCAGCTTATG
GAAATGTCCGATCAGCATACAGCGGATATACAGCTCGCCCTTATCTCCCT
CTTCAAACTAGGAAAGCCTGTTGTCGTTCCTGGATTGGAAGATATGGAGG
CTGGATTACAACATTTTGCTTCCCTTGACAAGTCATACCTCGAGGACGTT
TCCAGTCGCATTCACGAATTTACTAAGGCTCGAAGTTTGCCTATTGATAA
CCTCACACTTGACGCTTACATAGAACAACGGAGCATTGGTTTTGGGTTGA
GATGGCTCTTTCGCAGGTTCCAAGTCTAGTGCACGGAAGACTGCCTTCTT
CCTTGGAGGAACCAGACGAGGAGGGAATCTGGACTCCCCTCCAGCTGGCC
GCCGCACAAGGCAACCTACCCGAAGTGAAGGCTCTTTTGTCTCAGCCATC
AAGCAACCCCAACGAGCCTCCCAGAGGTTACTACGGCCAGACTGCACTCC
AGGCGGCCTCGCTCAACGGTCATCTTGATGTGGTCGAAACGCTCTTAGCC
GCTGGGGCCGATGTGAATGCTCCCGGGGGCAACAACGGCGGCCGAACCGC
CCTCACCCTCGCCGCAGGTGCCGGCCACTTCCAGATCGTTCGCCATCTAG
TCATCGCCGCAGGTGCGGACGTCAAGCAGCCAGCCCACAAATACGTGGGG
CGCACCGCCCTGCAGGCCGCTGCGGAGGGAGGCCATCTCGAGATCTTACA
GTGGCTGTTACAACACCAGCCGGTTACGGAAATCAACGCGCCCCCCGCGA
ACAACCGGGGTCGGACCGTGCTGCAGGCCGCAGCGTTTGGTGGCTATGAT
GACATGGTAGAGTTTTTACTTCATGTCGGTGCGGACGTGAATGCACCACC
CTGCAGATACCATGGCGTTACAGCGCTTCAGGGCGCGGCCTTCAACGGTC
ACCGCACCACCGTCCTTCGACTCTTGACGGCCGGGGCGGATGTGAACGCT
CCCGGGGGCCGGTACAATGGCTACACGGCGCTGGCAGCAGCAGCAGAAGG
CGGCCATGCGGACATTGTGCGACTCTTGTTGGACGCCGGCGCAGATGTCG
CCATGTGACGTCATGGTCCCCTGGCTCCGTGCTGCCCACGAAATCGAGAT
TTCTAAGGAGGAAGAAAAATCCATCATGCAAATAATCAAAAAGGGTAGTT
CTGTTTCGGCACTGACGAATGACTACTACAGTTTTCATAAGGAGTATGAC
GACGCAATTGGAACTGGACAATCGCCCAAGCCATATAATGCAATTGGCGT
TCTGATGTGTGACTACGCATATTCCGAAGACGAAGCATTTCAAATCCTAA
AACGGGAGATTCTCGCTCAGGAAGTTCAGCTTATGGAAATGTCCGATCAG
CATACAGCGGATATACAGCTCGCCCTTATCTCCCTCTTCAAACTAGGAAA
GCCTGTTGTCGTTCCTGGATTGGAAGATATGGAGGCTGGATTACAACATT
TTGCTTCCCTTGACAAGTCATACCTCGAGGACGTTTCCAGTCGCATTCAC
GAATTTACTAAGGCTCGAAGTTTGCCTATTGATAACCTCACACTTGACGC
TTACATAGAACAACGGAGCATTGGTTTTGGGTTGAGATGGCTCTTTCGCA
GGTTCCAAGTCTAGTGCACGGAAGACTGCCTTCTTCCTTGGAGGAACCAG
ACGAGGAGGGAATCTGGACTCCCCTCCAGCTGGCCGCCGCACAAGGCAAC
CTACCCGAAGTGAAGGCTCTTTTGTCTCAGCCATCAAGCAACCCCAACGA
GCCTCCCAGAGGTTACTACGGCCAGACTGCACTCCAGGCGGCCTCGCTCA
ACGGTCATCTTGATGTGGTCGAAACGCTCTTAGCCGCTGGGGCCGATGTG
AATGCTCCCGGGGGCAACAACGGCGGCCGAACCGCCCTCACCCTCGCCGC
AGGTGCCGGCCACTTCCAGATCGTTCGCCATCTAGTCATCGCCGCAGGTG
CGGACGTCAAGCAGCCAGCCCACAAATACGTGGGGCGCACCGCCCTGCAG
GCCGCTGCGGAGGGAGGCCATCTCGAGATCTTACAGTGGCTGTTACAACA
CCAGCCGGTTACGGAAATCAACGCGCCCCCCGCGAACAACCGGGGTCGGA
CCGTGCTGCAGGCCGCAGCGTTTGGTGGCTATGATGACATGGTAGAGTTT
TTACTTCATGTCGGTGCGGACGTGAATGCACCACCCTGCAGATACCATGG
CGTTACAGCGCTTCAGGGCGCGGCCTTCAACGGTCACCGCACCACCGTCC
TTCGACTCTTGACGGCCGGGGCGGATGTGAACGCTCCCGGGGGCCGGTAC
AATGGCTACACGGCGCTGGCAGCAGCAGCAGAAGGCGGCCATGCGGACAT
TGTGCGACTCTTGTTGGACGCCGGCGCAGATGTCGCCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_49870CAN33_49870Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49870-T1CAN33_49870-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49870-T1.cdsCAN33_49870-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49870-T1.exon4CAN33_49870-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_49870-T1.exon3CAN33_49870-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_49870-T1.exon2CAN33_49870-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_49870-T1.exon1CAN33_49870-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR008949
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
ProductAnkyrin repeats (3 copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4844077..4847042 -
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