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CAN33_50590-T1, CAN33_50590-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50590-T1
Unique NameCAN33_50590-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:322298..323360+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50590-T1 ID=CAN33_50590-T1|Name=CAN33_50590-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1063bp|location=Sequence derived from alignment at NKJJ01000020.1:322298..323360+ (Aspergillus niger FDAARGOS_311)
ATGCCTAAAGCTAGTGCCACCAAGATCATTTCCCTTTCTATCTTCTCCCT
TCTCACCACCGCTTCTGCCTACACAATCGTAGGCTGCTATAGCAGTCCCG
GCCAGCTAACCTCAGCGGGCACCTTTCAATTCCAATCCGAAGGCTACTGC
CAGCAAATTTGCACGAAGCAAAACAAGCCCATCTTCGCCCTCTACAACGG
CGACGAATGCTACTGCGGCGATGCATTGCCCCCTTCAACAGCCAAGGTCT
CTTCCACACAATGTCAAACCCCTTGCTCCGGATTTCCATCTGATCCTTGT
ACGTATACTCCCATAAGGCCCTCGTTAGTCAGCCCAACAGGACCCCATAC
TAATGCATAAATCACTATAGGCGGCGGCACCAATGCATGGCTAATCAACA
ACTCCACCACCATCTCGCAGCCCACAACCGACAACAACATCGTCACAGAA
CTGAAACGTGAATCCACAGACAATGTCGAGAATGGCATCGTGATTGCCCC
GGAGTCCGATGACTCCGACTCATCCTCAGGCAACTCCAACTCTCCTGAGA
CCATGACAGTCAATCCTACCATGGTGGAGACCGGCATCCCTATCGCCCCC
AGCTCCGGTGCAGACGGAGGCGCAGCTAAATCTACCATCCCGAGTGTAAT
TCTTACGGCGCCGTCCATGACGGGCGTCACTGTTCCGGCTACTGGTGCTG
CTGCGGCGTCGTCTATGGTTGTTGCGGCGTCGTCTGCTTCGGCGTCTGCC
ACGGCTGCTGCATCCGGAGCGGCGAGCAGTGGTTCGGCCGCCGCGAGCCC
ATCAACTAGTGCGGGTGCCGCTGCTGCTGTCGCTGGTGCTCCTGCTGGTG
GGATGATCGGGGGTGTGGTTATGGCGGCAATTGTTGCGCTCGGACTGTAG
ATATGTCTTTCTACATCCTACATTCTAAGCGGATGGAGTGGATGGATGGA
TGGACTGATTGATTCAAGCGGGGATGATTCATCATGTATAAATAGCTACG
GATGTACGGTATGGGTACAGGGCTAGGCATTGAAGGTACTTACCTATAAT
AGGCTGGAGTTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:322298..323360+

>CAN33_50590-T1 ID=CAN33_50590-T1|Name=CAN33_50590-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2604bp|location=Sequence derived from alignment at NKJJ01000020.1:322298..323360+ (Aspergillus niger FDAARGOS_311)
ATGCCTAAAGCTAGCTGCTATAGCAGTCCCGGCCAGCTAACCTCAGCGGG
CACCTTTCAATTCCAATCCGAAGGCTACTGCCAGCAAATTTGCACGAAGC
AAAACAAGCCCATCTTCGCCCTCTACAACGGCGACGAATGCTACTGCGGC
GATGCATTGCCCCCTTCAACAGCCAAGGTCTCTTCCACACAATGTCAAAC
CCCTTGCTCCGGATTTCCATCTGATCCTTGCGGCGGCACCAATGCATGGC
TAATCAACAACTCCACCACCATCTCGCAGCCCACAACCGACAACAACATC
GTCACAGAACTGAAACGTGAATCCACAGACAATGTCGAGAATGGCATCGT
GATTGCCCCGGAGTCCGATGACTCCGACTCATCCTCAGGCAACTCCAACT
CTCCTGAGACCATGACAGTCAATCCTACCATGGTGGAGACCGGCATCCCT
ATCGCCCCCAGCTCCGGTGCAGACGGAGGCGCAGCTAAATCTACCATCCC
GAGTGTAATTCTTACGGCGCCGTCCATGACGGGCGTCACTGTTCCGGCTA
CTGGTGCTGCTGCGGCGTCGTCTATGGTTGTTGCGGCGTCGTCTGCTTCG
GCGTCTGCCACGGCTGCTGCATCCGGAGCGGCGAGCAGTGGCTGGAGTTA
AATGCCTAAAGCTAGCTGCTATAGCAGTCCCGGCCAGCTAACCTCAGCGG
GCACCTTTCAATTCCAATCCGAAGGCTACTGCCAGCAAATTTGCACGAAG
CAAAACAAGCCCATCTTCGCCCTCTACAACGGCGACGAATGCTACTGCGG
CGATGCATTGCCCCCTTCAACAGCCAAGGTCTCTTCCACACAATGTCAAA
CCCCTTGCTCCGGATTTCCATCTGATCCTTGCGGCGGCACCAATGCATGG
CTAATCAACAACTCCACCACCATCTCGCAGCCCACAACCGACAACAACAT
CGTCACAGAACTGAAACGTGAATCCACAGACAATGTCGAGAATGGCATCG
TGATTGCCCCGGAGTCCGATGACTCCGACTCATCCTCAGGCAACTCCAAC
TCTCCTGAGACCATGACAGTCAATCCTACCATGGTGGAGACCGGCATCCC
TATCGCCCCCAGCTCCGGTGCAGACGGAGGCGCAGCTAAATCTACCATCC
CGAGTGTAATTCTTACGGCGCCGTCCATGACGGGCGTCACTGTTCCGGCT
ACTGGTGCTGCTGCGGCGTCGTCTATGGTTGTTGCGGCGTCGTCTGCTTC
GGCGTCTGCCACGGCTGCTGCATCCGGAGCGGCGAGCAGTGGCTGGAGTT
AAATGCCTAAAGCTAGCTGCTATAGCAGTCCCGGCCAGCTAACCTCAGCG
GGCACCTTTCAATTCCAATCCGAAGGCTACTGCCAGCAAATTTGCACGAA
GCAAAACAAGCCCATCTTCGCCCTCTACAACGGCGACGAATGCTACTGCG
GCGATGCATTGCCCCCTTCAACAGCCAAGGTCTCTTCCACACAATGTCAA
ACCCCTTGCTCCGGATTTCCATCTGATCCTTGCGGCGGCACCAATGCATG
GCTAATCAACAACTCCACCACCATCTCGCAGCCCACAACCGACAACAACA
TCGTCACAGAACTGAAACGTGAATCCACAGACAATGTCGAGAATGGCATC
GTGATTGCCCCGGAGTCCGATGACTCCGACTCATCCTCAGGCAACTCCAA
CTCTCCTGAGACCATGACAGTCAATCCTACCATGGTGGAGACCGGCATCC
CTATCGCCCCCAGCTCCGGTGCAGACGGAGGCGCAGCTAAATCTACCATC
CCGAGTGTAATTCTTACGGCGCCGTCCATGACGGGCGTCACTGTTCCGGC
TACTGGTGCTGCTGCGGCGTCGTCTATGGTTGTTGCGGCGTCGTCTGCTT
CGGCGTCTGCCACGGCTGCTGCATCCGGAGCGGCGAGCAGTGGCTGGAGT
TAAATGCCTAAAGCTAGCTGCTATAGCAGTCCCGGCCAGCTAACCTCAGC
GGGCACCTTTCAATTCCAATCCGAAGGCTACTGCCAGCAAATTTGCACGA
AGCAAAACAAGCCCATCTTCGCCCTCTACAACGGCGACGAATGCTACTGC
GGCGATGCATTGCCCCCTTCAACAGCCAAGGTCTCTTCCACACAATGTCA
AACCCCTTGCTCCGGATTTCCATCTGATCCTTGCGGCGGCACCAATGCAT
GGCTAATCAACAACTCCACCACCATCTCGCAGCCCACAACCGACAACAAC
ATCGTCACAGAACTGAAACGTGAATCCACAGACAATGTCGAGAATGGCAT
CGTGATTGCCCCGGAGTCCGATGACTCCGACTCATCCTCAGGCAACTCCA
ACTCTCCTGAGACCATGACAGTCAATCCTACCATGGTGGAGACCGGCATC
CCTATCGCCCCCAGCTCCGGTGCAGACGGAGGCGCAGCTAAATCTACCAT
CCCGAGTGTAATTCTTACGGCGCCGTCCATGACGGGCGTCACTGTTCCGG
CTACTGGTGCTGCTGCGGCGTCGTCTATGGTTGTTGCGGCGTCGTCTGCT
TCGGCGTCTGCCACGGCTGCTGCATCCGGAGCGGCGAGCAGTGGCTGGAG
TTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50590CAN33_50590Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50590-T1.exon1CAN33_50590-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_50590-T1.exon2CAN33_50590-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50590-T1.exon3CAN33_50590-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_50590-T1.exon4CAN33_50590-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50590-T1.cdsCAN33_50590-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50590-T1CAN33_50590-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002889
DBxrefPFAM:PF01822
ProductWSC domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:322298..323360 +
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