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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:574835..576553- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_51030-T1 ID=CAN33_51030-T1|Name=CAN33_51030-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1719bp|location=Sequence derived from alignment at NKJJ01000020.1:574835..576553- (Aspergillus niger FDAARGOS_311)
ATGTCCAAGACCAAGTCCGTTACCAAGAAGGGCTCTGAGAAGCCGGTTGA
CAAGACCCTTAGCAAGGTCAAGTCTGCTGGTGTGACCAAGTCCTCCCAGT
CCCCCAAGGCCAAGAGCAAGCAGATTGCTCGTGAGGTTGCCTCCAAGGAG
AAGAAGGACAAGAAGAAGAAGAAGGAGCCTACTCCCAGCGAGTCTTCCGA
GTCCGAGTCCGACAGCGACGAGGAGATGGCCTCCGACTCCAGCTCCAGCA
GCGAGAGTGAGGACGAGAAGCCCGCCAAGAAGACTGAGAAGAAGGGCAAG
AAGGTTGAGTCCGAGTCCGAGTCTTCCGAGTCTGAGTCTGAGTCCGACTC
TGACAGCGATGAGGAGATGAACGACGCCTCTAGCAGCGAGAGCGAGGAGG
AGGAGAAGCCTGCCAAGAAGACCAAGGAGGAGCCCAAGAAGGCTGCCAAG
AAGGCTGAGTCCAGCGACTCTGAGTCTGAGTCTTCTGACTCTGACTCCGA
GTCCGAGGATGAGAAGCCTGCTAAGAAGGAGACCAAGAAGGCTGAGTCCG
AGTCTGAGTCTTCCGACTCTGACTCTGACTCCTCCTCTGAGGAGGAGGCC
CCCAAGAAGGCCGCCAAGAAGGAGTCCAGCGACAGCGACTCTGACTCCGA
CTCCGACTCTGACTCTGAGAGCGAGGAGGAGACCAAGGAGAAGAAGGCCG
AGAAGGTATGCTGATTCATTCCTTTCATTCAAGTCTTATGCTAACGACCA
CAGGAGTCTTCCGACTCTTCTGACTCCGACTCCTCCGACTCCGACTCTGA
CTCCGAGTCTGAGGAGAGCGAGAAGCCCTCCAAGAAGCGTAAGGCTGAGG
AGGAGACCTCCGCTACCCCCAAGAAGTCCAAGACTGAGGATCCTGCTCCT
GGTGCTTCTGCCAACCTGTTCGTCGGTAACCTGTCCTGGAACGTCGATGA
GGCTTGGCTCCAGTCCGAGTTCGAGAGCTTCGGTGAGCTCTCCGGTGTTC
GTATCATGACTGAGCGTGACACTGGCCGCTCTCGTGGGTGAGTACAGTCT
TTGTCCATAACTATCGAGCAACTGCTAACCCCTTCCAGTTTCGGTTACGT
TGAGTACACCAACGCTGTCGATGCCGCCAAGGCCTTCGAGGCCAAGAAGG
GTGCTGAGATCGACGGACGTGTGATCAACCTGGACTATGCCACTGGCCGT
CCCGCCAACAAGGACCAGCAGGGTGGTTTCAAGGACCGCGCCAACGCTCG
TGCCCGTTCCTTCGGTGACCAGGCCAGCCCCGAGAGTGACACCCTCTTCG
TCGGCAACCTTCCCTTCGATGCCAACGAGGACTCGGTCGGCGAGCTGTTC
GGTGAGAAGGGTAGCATCCTCGGCATCCGCCTGCCCACCGACCCCGACTC
TGGCCGCCCCAAGGGCTTCGGCTACGTCCAGTACTCCTCTGTCGACGAGG
CCCGCGCTGCCTTCAACGAGCTCCAGGGTGCTGACCTGCTCGGACGCCCG
GTGCGTCTGGACTTCAGCACTCCCCGTGCCAACAACGGCGGCGGCGGTGG
TGGTCGCGGTGGTGGCCGTGGCGGCTTCGGCGGTCGTGGCGGTGGTCGTG
GTGGCTTCGGTGATCGTGGTGGCCGTGGCCGTGGTGGCTTCGGTGGCCGC
GGTGGTGGTGCCCCCAACAAGGCTCGTGGTGGTATCCCCGAGTACAAGGG
CACCAAGGTCACTTTCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:574835..576553- >CAN33_51030-T1 ID=CAN33_51030-T1|Name=CAN33_51030-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4605bp|location=Sequence derived from alignment at NKJJ01000020.1:574835..576553- (Aspergillus niger FDAARGOS_311)
GCTCGTGGTGGTATCCCCGAGTACAAGGGCACCAAGGTCACTTTCTAATT
TCGGTTACGTTGAGTACACCAACGCTGTCGATGCCGCCAAGGCCTTCGAG
GCCAAGAAGGGTGCTGAGATCGACGGACGTGTGATCAACCTGGACTATGC
CACTGGCCGTCCCGCCAACAAGGACCAGCAGGGTGGTTTCAAGGACCGCG
CCAACGCTCGTGCCCGTTCCTTCGGTGACCAGGCCAGCCCCGAGAGTGAC
ACCCTCTTCGTCGGCAACCTTCCCTTCGATGCCAACGAGGACTCGGTCGG
CGAGCTGTTCGGTGAGAAGGGTAGCATCCTCGGCATCCGCCTGCCCACCG
ACCCCGACTCTGGCCGCCCCAAGGGCTTCGGCTACGTCCAGTACTCCTCT
GTCGACGAGGCCCGCGCTGCCTTCAACGAGCTCCAGGGTGCTGACCTGCT
CGGACGCCCGAAGCCCTCCAAGAAGCGTAAGGCTGAGGAGGAGACCTCCG
CTACCCCCAAGAAGTCCAAGACTGAGGATCCTGCTCCTGGTGCTTCTGCC
AACCTGTTCGTCGGTAACCTGTCCTGGAACGTCGATGAGGCTTGGCTCCA
GTCCGAGTTCGAGAGCTTCGGTGAGCTCTCCGGTGTTCGTATCATGACTG
AGCGTGACACTGGCCGCTCTCGTGGTCTTCCGAGTCCGAGTCCGACAGCG
ACGAGGAGATGGCCTCCGACTCCAGCTCCAGCAGCGAGAGTGAGGACGAG
AAGCCCGCCAAGAAGACTGAGAAGAAGGGCAAGAAGATGTCCAAGACCAA
GTCCGTTACCAAGAAGGGCTCTGAGAAGCCGGTTGACAAGACCCTTAGCA
AGGTCAAGTCTGCTGGTGTGACCAAGTCCTCCCAGTCCCCCAAGGCCAAG
AGCAAGCAGATTGCTCGTGAGGCTCGTGGTGGTATCCCCGAGTACAAGGG
CACCAAGGTCACTTTCTAATTTCGGTTACGTTGAGTACACCAACGCTGTC
GATGCCGCCAAGGCCTTCGAGGCCAAGAAGGGTGCTGAGATCGACGGACG
TGTGATCAACCTGGACTATGCCACTGGCCGTCCCGCCAACAAGGACCAGC
AGGGTGGTTTCAAGGACCGCGCCAACGCTCGTGCCCGTTCCTTCGGTGAC
CAGGCCAGCCCCGAGAGTGACACCCTCTTCGTCGGCAACCTTCCCTTCGA
TGCCAACGAGGACTCGGTCGGCGAGCTGTTCGGTGAGAAGGGTAGCATCC
TCGGCATCCGCCTGCCCACCGACCCCGACTCTGGCCGCCCCAAGGGCTTC
GGCTACGTCCAGTACTCCTCTGTCGACGAGGCCCGCGCTGCCTTCAACGA
GCTCCAGGGTGCTGACCTGCTCGGACGCCCGAAGCCCTCCAAGAAGCGTA
AGGCTGAGGAGGAGACCTCCGCTACCCCCAAGAAGTCCAAGACTGAGGAT
CCTGCTCCTGGTGCTTCTGCCAACCTGTTCGTCGGTAACCTGTCCTGGAA
CGTCGATGAGGCTTGGCTCCAGTCCGAGTTCGAGAGCTTCGGTGAGCTCT
CCGGTGTTCGTATCATGACTGAGCGTGACACTGGCCGCTCTCGTGGTCTT
CCGAGTCCGAGTCCGACAGCGACGAGGAGATGGCCTCCGACTCCAGCTCC
AGCAGCGAGAGTGAGGACGAGAAGCCCGCCAAGAAGACTGAGAAGAAGGG
CAAGAAGATGTCCAAGACCAAGTCCGTTACCAAGAAGGGCTCTGAGAAGC
CGGTTGACAAGACCCTTAGCAAGGTCAAGTCTGCTGGTGTGACCAAGTCC
TCCCAGTCCCCCAAGGCCAAGAGCAAGCAGATTGCTCGTGAGGCTCGTGG
TGGTATCCCCGAGTACAAGGGCACCAAGGTCACTTTCTAATTTCGGTTAC
GTTGAGTACACCAACGCTGTCGATGCCGCCAAGGCCTTCGAGGCCAAGAA
GGGTGCTGAGATCGACGGACGTGTGATCAACCTGGACTATGCCACTGGCC
GTCCCGCCAACAAGGACCAGCAGGGTGGTTTCAAGGACCGCGCCAACGCT
CGTGCCCGTTCCTTCGGTGACCAGGCCAGCCCCGAGAGTGACACCCTCTT
CGTCGGCAACCTTCCCTTCGATGCCAACGAGGACTCGGTCGGCGAGCTGT
TCGGTGAGAAGGGTAGCATCCTCGGCATCCGCCTGCCCACCGACCCCGAC
TCTGGCCGCCCCAAGGGCTTCGGCTACGTCCAGTACTCCTCTGTCGACGA
GGCCCGCGCTGCCTTCAACGAGCTCCAGGGTGCTGACCTGCTCGGACGCC
CGAAGCCCTCCAAGAAGCGTAAGGCTGAGGAGGAGACCTCCGCTACCCCC
AAGAAGTCCAAGACTGAGGATCCTGCTCCTGGTGCTTCTGCCAACCTGTT
CGTCGGTAACCTGTCCTGGAACGTCGATGAGGCTTGGCTCCAGTCCGAGT
TCGAGAGCTTCGGTGAGCTCTCCGGTGTTCGTATCATGACTGAGCGTGAC
ACTGGCCGCTCTCGTGGTCTTCCGAGTCCGAGTCCGACAGCGACGAGGAG
ATGGCCTCCGACTCCAGCTCCAGCAGCGAGAGTGAGGACGAGAAGCCCGC
CAAGAAGACTGAGAAGAAGGGCAAGAAGATGTCCAAGACCAAGTCCGTTA
CCAAGAAGGGCTCTGAGAAGCCGGTTGACAAGACCCTTAGCAAGGTCAAG
TCTGCTGGTGTGACCAAGTCCTCCCAGTCCCCCAAGGCCAAGAGCAAGCA
GATTGCTCGTGAGGCTCGTGGTGGTATCCCCGAGTACAAGGGCACCAAGG
TCACTTTCTAATTTCGGTTACGTTGAGTACACCAACGCTGTCGATGCCGC
CAAGGCCTTCGAGGCCAAGAAGGGTGCTGAGATCGACGGACGTGTGATCA
ACCTGGACTATGCCACTGGCCGTCCCGCCAACAAGGACCAGCAGGGTGGT
TTCAAGGACCGCGCCAACGCTCGTGCCCGTTCCTTCGGTGACCAGGCCAG
CCCCGAGAGTGACACCCTCTTCGTCGGCAACCTTCCCTTCGATGCCAACG
AGGACTCGGTCGGCGAGCTGTTCGGTGAGAAGGGTAGCATCCTCGGCATC
CGCCTGCCCACCGACCCCGACTCTGGCCGCCCCAAGGGCTTCGGCTACGT
CCAGTACTCCTCTGTCGACGAGGCCCGCGCTGCCTTCAACGAGCTCCAGG
GTGCTGACCTGCTCGGACGCCCGAAGCCCTCCAAGAAGCGTAAGGCTGAG
GAGGAGACCTCCGCTACCCCCAAGAAGTCCAAGACTGAGGATCCTGCTCC
TGGTGCTTCTGCCAACCTGTTCGTCGGTAACCTGTCCTGGAACGTCGATG
AGGCTTGGCTCCAGTCCGAGTTCGAGAGCTTCGGTGAGCTCTCCGGTGTT
CGTATCATGACTGAGCGTGACACTGGCCGCTCTCGTGGTCTTCCGAGTCC
GAGTCCGACAGCGACGAGGAGATGGCCTCCGACTCCAGCTCCAGCAGCGA
GAGTGAGGACGAGAAGCCCGCCAAGAAGACTGAGAAGAAGGGCAAGAAGA
TGTCCAAGACCAAGTCCGTTACCAAGAAGGGCTCTGAGAAGCCGGTTGAC
AAGACCCTTAGCAAGGTCAAGTCTGCTGGTGTGACCAAGTCCTCCCAGTC
CCCCAAGGCCAAGAGCAAGCAGATTGCTCGTGAGGCTCGTGGTGGTATCC
CCGAGTACAAGGGCACCAAGGTCACTTTCTAATTTCGGTTACGTTGAGTA
CACCAACGCTGTCGATGCCGCCAAGGCCTTCGAGGCCAAGAAGGGTGCTG
AGATCGACGGACGTGTGATCAACCTGGACTATGCCACTGGCCGTCCCGCC
AACAAGGACCAGCAGGGTGGTTTCAAGGACCGCGCCAACGCTCGTGCCCG
TTCCTTCGGTGACCAGGCCAGCCCCGAGAGTGACACCCTCTTCGTCGGCA
ACCTTCCCTTCGATGCCAACGAGGACTCGGTCGGCGAGCTGTTCGGTGAG
AAGGGTAGCATCCTCGGCATCCGCCTGCCCACCGACCCCGACTCTGGCCG
CCCCAAGGGCTTCGGCTACGTCCAGTACTCCTCTGTCGACGAGGCCCGCG
CTGCCTTCAACGAGCTCCAGGGTGCTGACCTGCTCGGACGCCCGAAGCCC
TCCAAGAAGCGTAAGGCTGAGGAGGAGACCTCCGCTACCCCCAAGAAGTC
CAAGACTGAGGATCCTGCTCCTGGTGCTTCTGCCAACCTGTTCGTCGGTA
ACCTGTCCTGGAACGTCGATGAGGCTTGGCTCCAGTCCGAGTTCGAGAGC
TTCGGTGAGCTCTCCGGTGTTCGTATCATGACTGAGCGTGACACTGGCCG
CTCTCGTGGTCTTCCGAGTCCGAGTCCGACAGCGACGAGGAGATGGCCTC
CGACTCCAGCTCCAGCAGCGAGAGTGAGGACGAGAAGCCCGCCAAGAAGA
CTGAGAAGAAGGGCAAGAAGATGTCCAAGACCAAGTCCGTTACCAAGAAG
GGCTCTGAGAAGCCGGTTGACAAGACCCTTAGCAAGGTCAAGTCTGCTGG
TGTGACCAAGTCCTCCCAGTCCCCCAAGGCCAAGAGCAAGCAGATTGCTC
GTGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034272 |
| DBxref | InterPro:IPR034276 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | RNA recognition motif family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:574835..576553 - |
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