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CAN33_51045-T1, CAN33_51045-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51045-T1
Unique NameCAN33_51045-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:580449..581702+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51045-T1 ID=CAN33_51045-T1|Name=CAN33_51045-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1254bp|location=Sequence derived from alignment at NKJJ01000020.1:580449..581702+ (Aspergillus niger FDAARGOS_311)
ATGGCCCCTCCCAAGGTCTTCTCTATCGAGGGCAAAGGCCTCAAGCTCGA
TACCGCTGAGGATATCGAGTCCCATATCAAGCCTCTTCTCGAAGCCACCG
ACTACACTGAGATCCGCTTCGGAGGAAACACTCTGGGTGTGCCTGCTTGC
GAGCGTCTCGCCGCTGTGCTTTCTACACAAAAGAGCCTCGAAGTGGCTGA
ACTTGCCGACATCTTCACCTCTCGTCTGCTGAGCGAAATCCCCGACGCTC
TGACATTCCTCCTCAATGCCCTTCTCGAAATCACGACCCTTCACACCGTC
AACCTCTCCGACAATGCCTTCGGCGCCAACACCCAGAAGCCCCTCGTCGA
CTTCCTCGCTCGCCACACCCCGCTCCGCCACCTGATCCTCAACAACAACG
GCATGGGTCCCGAGGCTGGTTCGAACATTGCGAAGGCACTCACGGAGCTG
GCTCAGCGCAAGGAGGAGGCCCGTAAGGAGGGCAAGGAGGTCCCTCTTCT
CGAGAGCATCGTCTGCGGTCGCAATCGCTTGGAGAACGGCAGTATGGCGG
CTTGGGCACGTGCCTATGAGGTGCACGCTGTCGGCATGCGCTCCGTCAAG
ATGACACAGAACGGTATCCGTCAGGAGGGTATCTCTATGCTGCTGAAGGA
TGGTCTTCGCCACTGCTCTGCTTTGGAGGTGCTCGACTTGCAGGACAACA
CTTTCACCATCATGGGCTCCACCGCCCTGGCTGGTGTAGTCTCCAGCTGG
CCCTCTCTCCGTGAGCTCGGTGTCAGTGACTGCTTGCTGTCGGGCCGTGG
TGGCGTCAAGGTCGCTCAGGCTCTGGCTGAGGCCAAGAATCAGAAGGTCC
AGACGCTGCGTCTGCAGTACAACGAGATCACCGCCGAGGGTGTCAAGCAG
TTCCTGCACGCCACCAAGACTGCTCTTCCTGCCTTGCGTCGCATTGAGCT
GAACGGCAACATCTTCAACGAGGATGACAACAACGTGACGGAACTGCGCG
AGATTCTGGAGGCCCGTCAGGAGGAGCACGGCCAGGATGATGACCCGGAG
GATATGTGGGGTGTCGACGAGCTGGACGAACTCGAGGAGGAGGAGAGCGA
GGAGGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAAGAGAAGGCCGAGA
AGCTTGTCAAGGACGACGAGCAGGCGGAGAACGAAAAGGTTTCCCAGAAG
AAGGACGACGATGTTGACAAGCTTGCCGACGTCTTGGGCAAAACCGGTCT
GTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:580449..581702+

>CAN33_51045-T1 ID=CAN33_51045-T1|Name=CAN33_51045-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2238bp|location=Sequence derived from alignment at NKJJ01000020.1:580449..581702+ (Aspergillus niger FDAARGOS_311)
ATGGCCCCTCCCAAGGTCTTCTCTATCGAGGGCAAAGGCCTCAAGCTCGA
TACCGCTGAGGATATCGAGTCCCATATCAAGCCTCTTCTCGAAGCCACCG
ACTACACTGAGATCCGCTTCGGAGGAAACACTCTGGGTGTGCCTGCTTGC
GAGCGTCTCGCCGCTGTGCTTTCTACACAAAAGAGCCTCGAAGTGGCTGA
ACTTGCCGACATCTTCACCTCTCGTCTGCTGAGCGAAATCCCCGACGCTC
TGACATTCCTCCTCAATGCCCTTCTCGAAATCACGACCCTTCACACCGTC
AACCTCTCCGACAATGCCTTCGGCGCCAACACCCAGAAGCCCCTCGTCGA
CTTCCTCGCTCGCCACACCCCGCTCCGCCACCTGATCCTCAACAACAACG
GCATGGGTCCCGAGGCTGGTTCGAACATTGCGAAGGCACTCACGGAGCTG
GCTCAGCGCAAGGAGGAGGCCCGTAAGGAGGGCAAGGAGGTCCCTCTTCT
CGAGAGCATCGTCTGCGGTCGCAATCGCTTGGAGAACGGCAGTATGGCGG
CTTGGGCACGTGCCTATGAGGTGCACGCTGTCGGCATGCGCTCCGTCAAG
ATGACACAGAACGGTATCCGTCAGGAGGGTATCTCTATGCTGCTGAAGGA
TGGTCTTCGCCACTGCTCTGCTTTGGAGGTGCTCGACTTGCAGGACAACA
CTTTCACCATCATGGGCTCCACCGCCCTGGCTGGTGTAGTCTCCAGCTGG
CCCTCTCTCCGTGAGCTCGGTGTCAGTGACTGCTTGCTGTCGGGCCGTGG
TGGCGTCAAGGTCGCTCAGGCTCTGGCTGAGGCCAAGAATCAGAAGGTCC
AGACGCTGCGTCTGCAGTACAACGAGATCACCGCCGAGGGTGTCAAGCAG
TTCCTGCACGCCACCAAGACTGCTCTTCCTGCCTTGCGTCGCATTGAGCT
GAACGGCAACATCTTCAACGAGGATGACAACAACGTGACGGAACTGCGCG
AGATTCTGGAGGCCCGTCAGGAGGAGCACGGCCAGGATGATGACCCGGAG
GATATGTGGGGTAAGAAGGACGACGATGTTGACAAGCTTGCCGACGTCTT
GGGCAAAACCGGTCTGTAGATGGCCCCTCCCAAGGTCTTCTCTATCGAGG
GCAAAGGCCTCAAGCTCGATACCGCTGAGGATATCGAGTCCCATATCAAG
CCTCTTCTCGAAGCCACCGACTACACTGAGATCCGCTTCGGAGGAAACAC
TCTGGGTGTGCCTGCTTGCGAGCGTCTCGCCGCTGTGCTTTCTACACAAA
AGAGCCTCGAAGTGGCTGAACTTGCCGACATCTTCACCTCTCGTCTGCTG
AGCGAAATCCCCGACGCTCTGACATTCCTCCTCAATGCCCTTCTCGAAAT
CACGACCCTTCACACCGTCAACCTCTCCGACAATGCCTTCGGCGCCAACA
CCCAGAAGCCCCTCGTCGACTTCCTCGCTCGCCACACCCCGCTCCGCCAC
CTGATCCTCAACAACAACGGCATGGGTCCCGAGGCTGGTTCGAACATTGC
GAAGGCACTCACGGAGCTGGCTCAGCGCAAGGAGGAGGCCCGTAAGGAGG
GCAAGGAGGTCCCTCTTCTCGAGAGCATCGTCTGCGGTCGCAATCGCTTG
GAGAACGGCAGTATGGCGGCTTGGGCACGTGCCTATGAGGTGCACGCTGT
CGGCATGCGCTCCGTCAAGATGACACAGAACGGTATCCGTCAGGAGGGTA
TCTCTATGCTGCTGAAGGATGGTCTTCGCCACTGCTCTGCTTTGGAGGTG
CTCGACTTGCAGGACAACACTTTCACCATCATGGGCTCCACCGCCCTGGC
TGGTGTAGTCTCCAGCTGGCCCTCTCTCCGTGAGCTCGGTGTCAGTGACT
GCTTGCTGTCGGGCCGTGGTGGCGTCAAGGTCGCTCAGGCTCTGGCTGAG
GCCAAGAATCAGAAGGTCCAGACGCTGCGTCTGCAGTACAACGAGATCAC
CGCCGAGGGTGTCAAGCAGTTCCTGCACGCCACCAAGACTGCTCTTCCTG
CCTTGCGTCGCATTGAGCTGAACGGCAACATCTTCAACGAGGATGACAAC
AACGTGACGGAACTGCGCGAGATTCTGGAGGCCCGTCAGGAGGAGCACGG
CCAGGATGATGACCCGGAGGATATGTGGGGTAAGAAGGACGACGATGTTG
ACAAGCTTGCCGACGTCTTGGGCAAAACCGGTCTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_51045CAN33_51045Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51045-T1.exon1CAN33_51045-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_51045-T1.exon2CAN33_51045-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51045-T1.cdsCAN33_51045-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51045-T1CAN33_51045-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260KNI
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001611
DBxrefPFAM:PF13516
ProductLeucine Rich repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:580449..581702 +
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