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CAN33_51125-T1, CAN33_51125-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51125-T1
Unique NameCAN33_51125-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:632157..633409+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51125-T1 ID=CAN33_51125-T1|Name=CAN33_51125-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1253bp|location=Sequence derived from alignment at NKJJ01000020.1:632157..633409+ (Aspergillus niger FDAARGOS_311)
ATGCGGCCTATTTTGCTCTCCGGCCATGTGCGTTTCGCCTATACCCACCC
CGAACGCGATGATGGTCGCCCAGGAGCTAGGAACATGATATGAAAATCGG
GAAATAAAAGGGAATAAGGACGGGTCGCTGATTGATTTTTTGCTTAATAG
GAACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCGATCTTATCTT
CTCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGCG
AGCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTGGACGGTCGAT
GTGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCGT
GCGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTCC
CTACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAGCAGACTGTTG
GCTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTGCGGTGTTGGA
TATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGC
GCATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACATG
GGCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACGA
TGGAAAGGTGCGGAGAAATGCTTGTGTTTTGTTATGCATTTGGGGCTAGA
TGCTAACTGGGTGATGACAGACCGGTGAGCAGCTGGAGAACGTCCAGGCC
CACGAGTTCGACCACCAGATCAACGACATCCAGTTCTCCGCCGACCGCAC
CTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGGTACATAAGCCTG
CTACTATGCATGTCAAACGATTTTAAATGCTAACTCAACCCAGCTCATGT
CTACCCGTAACCTCGCCATCCTCAAAACCTATGTTGCCGACACTCCCCTG
AACAGCGCCACCATTACGCCCAAGAAGGACTACGTGATCCTGGGAGGTGG
TCAGGCCGCCATGGATGTCACCACGACCTCGGCCCGCCAGGGTAAGTTCG
AGGCTCGTTTCTACCACAAGGTCTTCGAGGACGAGATCGGTCGTGTCCGT
GGTCATTTCGGTCCCCTCAACACGGTTCACATCCACCCCGCCGGTACTGC
CTACGCCTCTGGAGGTGAGGACGGTTACGTCCGTGTGCACCACTTCGACA
AGCCCTACTTCGACTTCATGTACGAGGTCGAGCGCGAGCAGCTGAGGAAG
TGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:632157..633409+

>CAN33_51125-T1 ID=CAN33_51125-T1|Name=CAN33_51125-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4044bp|location=Sequence derived from alignment at NKJJ01000020.1:632157..633409+ (Aspergillus niger FDAARGOS_311)
ATGCGGCCTATTTTGCTCTCCGGCCATGAACGGTCTCTGAACCAAATCAA
GTTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCTAAGGATAAAATTG
TGTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTACCTACAATGGA
CACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGAACACTCAGATTCT
GGCAACCGGTTCGGCAGACAACACCGTGCGACTATGGAACGTGAAGACCG
GCGAGTGCATCAAGGTGTGGGACTTCCCTACGGCCGTCAAGCGGGTCGAG
TTCACCCCCGATGGAAGCAGACTGTTGGCTGTGACGGAGAAGCGTATGGG
TTTCTTGGGTACCATTGCGGTGTTGGATATCAACTACGGCGAGAACTTGA
CGGAGCAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCACAGAGAGCAAG
GCAACGGTTGCGGGCTGGAGTTACATGGGCAAGTACATCATTGCTGGTCA
CGAAGACGGCAGTGTCAGCCAGTACGATGGAAAGACCGGTGAGCAGCTGG
AGAACGTCCAGGCCCACGAGTTCGACCACCAGATCAACGACATCCAGTTC
TCCGCCGACCGCACCTACTTCATCACTGCCTCCAAGGACAAGTCCGCCAA
GCTCATGTCTACCCGTAACCTCGCCATCCTCAAAACCTATGTTGCCGACA
CTCCCCTGAACAGCGCCACCATTACGCCCAAGAAGGACTACGTGATCCTG
GGAGGTGGTCAGGCCGCCATGGATGTCACCACGACCTCGGCCCGCCAGGG
TAAGTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGACGAGATCGGTC
GTGTCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACATCCACCCCGCC
GGTACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTCCGTGTGCACCA
CTTCGACAAGCCCTACTTCGACTTCATGTACGAGGTCGAGCGCGAGCAGC
TGAGGAAGTGAATGCGGCCTATTTTGCTCTCCGGCCATGAACGGTCTCTG
AACCAAATCAAGTTCAACCGCGATGGCGATCTTATCTTCTCCGTGGCTAA
GGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGCGAGCGACTCGGTA
CCTACAATGGACACCAGGGTGCTATCTGGACGGTCGATGTGAGCCCGAAC
ACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCGTGCGACTATGGAA
CGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTCCCTACGGCCGTCA
AGCGGGTCGAGTTCACCCCCGATGGAAGCAGACTGTTGGCTGTGACGGAG
AAGCGTATGGGTTTCTTGGGTACCATTGCGGTGTTGGATATCAACTACGG
CGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGCGCATCACCTGCA
CAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACATGGGCAAGTACATC
ATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACGATGGAAAGACCGG
TGAGCAGCTGGAGAACGTCCAGGCCCACGAGTTCGACCACCAGATCAACG
ACATCCAGTTCTCCGCCGACCGCACCTACTTCATCACTGCCTCCAAGGAC
AAGTCCGCCAAGCTCATGTCTACCCGTAACCTCGCCATCCTCAAAACCTA
TGTTGCCGACACTCCCCTGAACAGCGCCACCATTACGCCCAAGAAGGACT
ACGTGATCCTGGGAGGTGGTCAGGCCGCCATGGATGTCACCACGACCTCG
GCCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACCACAAGGTCTTCGAGGA
CGAGATCGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAACACGGTTCACA
TCCACCCCGCCGGTACTGCCTACGCCTCTGGAGGTGAGGACGGTTACGTC
CGTGTGCACCACTTCGACAAGCCCTACTTCGACTTCATGTACGAGGTCGA
GCGCGAGCAGCTGAGGAAGTGAATGCGGCCTATTTTGCTCTCCGGCCATG
AACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCGATCTTATCTTC
TCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCGGCCAACGGCGA
GCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTGGACGGTCGATG
TGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAGACAACACCGTG
CGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTGTGGGACTTCCC
TACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAGCAGACTGTTGG
CTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTGCGGTGTTGGAT
ATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAGCCTAGCTTGCG
CATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTGGAGTTACATGG
GCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCAGCCAGTACGAT
GGAAAGACCGGTGAGCAGCTGGAGAACGTCCAGGCCCACGAGTTCGACCA
CCAGATCAACGACATCCAGTTCTCCGCCGACCGCACCTACTTCATCACTG
CCTCCAAGGACAAGTCCGCCAAGCTCATGTCTACCCGTAACCTCGCCATC
CTCAAAACCTATGTTGCCGACACTCCCCTGAACAGCGCCACCATTACGCC
CAAGAAGGACTACGTGATCCTGGGAGGTGGTCAGGCCGCCATGGATGTCA
CCACGACCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTTTCTACCACAAG
GTCTTCGAGGACGAGATCGGTCGTGTCCGTGGTCATTTCGGTCCCCTCAA
CACGGTTCACATCCACCCCGCCGGTACTGCCTACGCCTCTGGAGGTGAGG
ACGGTTACGTCCGTGTGCACCACTTCGACAAGCCCTACTTCGACTTCATG
TACGAGGTCGAGCGCGAGCAGCTGAGGAAGTGAATGCGGCCTATTTTGCT
CTCCGGCCATGAACGGTCTCTGAACCAAATCAAGTTCAACCGCGATGGCG
ATCTTATCTTCTCCGTGGCTAAGGATAAAATTGTGTGCGCCTGGTGGTCG
GCCAACGGCGAGCGACTCGGTACCTACAATGGACACCAGGGTGCTATCTG
GACGGTCGATGTGAGCCCGAACACTCAGATTCTGGCAACCGGTTCGGCAG
ACAACACCGTGCGACTATGGAACGTGAAGACCGGCGAGTGCATCAAGGTG
TGGGACTTCCCTACGGCCGTCAAGCGGGTCGAGTTCACCCCCGATGGAAG
CAGACTGTTGGCTGTGACGGAGAAGCGTATGGGTTTCTTGGGTACCATTG
CGGTGTTGGATATCAACTACGGCGAGAACTTGACGGAGCAGGCTGAGGAG
CCTAGCTTGCGCATCACCTGCACAGAGAGCAAGGCAACGGTTGCGGGCTG
GAGTTACATGGGCAAGTACATCATTGCTGGTCACGAAGACGGCAGTGTCA
GCCAGTACGATGGAAAGACCGGTGAGCAGCTGGAGAACGTCCAGGCCCAC
GAGTTCGACCACCAGATCAACGACATCCAGTTCTCCGCCGACCGCACCTA
CTTCATCACTGCCTCCAAGGACAAGTCCGCCAAGCTCATGTCTACCCGTA
ACCTCGCCATCCTCAAAACCTATGTTGCCGACACTCCCCTGAACAGCGCC
ACCATTACGCCCAAGAAGGACTACGTGATCCTGGGAGGTGGTCAGGCCGC
CATGGATGTCACCACGACCTCGGCCCGCCAGGGTAAGTTCGAGGCTCGTT
TCTACCACAAGGTCTTCGAGGACGAGATCGGTCGTGTCCGTGGTCATTTC
GGTCCCCTCAACACGGTTCACATCCACCCCGCCGGTACTGCCTACGCCTC
TGGAGGTGAGGACGGTTACGTCCGTGTGCACCACTTCGACAAGCCCTACT
TCGACTTCATGTACGAGGTCGAGCGCGAGCAGCTGAGGAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF34CAN33_51125Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51125-T1.exon1CAN33_51125-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_51125-T1.exon2CAN33_51125-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_51125-T1.exon3CAN33_51125-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_51125-T1.exon4CAN33_51125-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51125-T1.cdsCAN33_51125-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51125-T1CAN33_51125-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262W7C
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR027525
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producttranslation initiation factor eIF3 subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:632157..633409 +
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