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CAN33_51145-T1, CAN33_51145-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51145-T1
Unique NameCAN33_51145-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:638809..639797+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51145-T1 ID=CAN33_51145-T1|Name=CAN33_51145-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=989bp|location=Sequence derived from alignment at NKJJ01000020.1:638809..639797+ (Aspergillus niger FDAARGOS_311)
ATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTC
GCTCCGCAACGTCCGATCGGTAGGATGCCCTCCCCTGTCAGCATCGCTCA
GTAAACGGAGTTGGTCGAGCTGATCTTCAATTATGCACCTTGCTGACATC
CTTCGGTCCACTAGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACT
CCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAACG
CAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTG
TCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTT
GCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCA
GCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCAC
CGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCC
GGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACACAT
GAATGCCGACTGTAAGGCTGTCAATACCCCTTGTGTGCAGCCTCCCTTGC
TAACCGCTGTTTATAGGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGA
GGGTATCTTCCCTCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTT
CGTCTCCTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAG
AGTGGTTCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGA
GCAGGGCAAGAAGTTTGGCAAGAAGATGGGCAATGCCGGTACGTTTAAAG
CGATGCGCACTCGATCGCCATATAGATTGATGCGCCGAACGTCATTAAAC
TATACGGTCAATTTTACTGATAATCACGTCTAGCTATCTTCGGTGCCGGT
GCTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:638809..639797+

>CAN33_51145-T1 ID=CAN33_51145-T1|Name=CAN33_51145-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2976bp|location=Sequence derived from alignment at NKJJ01000020.1:638809..639797+ (Aspergillus niger FDAARGOS_311)
ATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTC
GCTCCGCAACGTCCGATCGGAACTTGAGTTTCTCGCAGACGCATCAGTCA
TTACTCCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGAT
GAACGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACC
ACCTGTCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACC
AGTTTGCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCT
CCGCAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGC
TCCACCGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGG
ACCCCGGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAA
CACATGAATGCCGACTGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGA
GGGTATCTTCCCTCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTT
CGTCTCCTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAG
AGTGGTTCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGA
GCAGGGCAAGAAGTTTGGCAAGAAGATGGGCAATGCCGCTATCTTCGGTG
CCGGTGCTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAGATGAGC
ATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTCGCTCCG
CAACGTCCGATCGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACTC
CGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAACGC
AGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTGT
CGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTTG
CAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCAG
CAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCACC
GGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCCG
GAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACACATG
AATGCCGACTGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTAT
CTTCCCTCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTC
CTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGT
TCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGG
CAAGAAGTTTGGCAAGAAGATGGGCAATGCCGCTATCTTCGGTGCCGGTG
CTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAGATGAGCATGGCG
TCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTCGCTCCGCAACGT
CCGATCGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACTCCGCAAC
AGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAACGCAGCAGA
GCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTGTCGTCGC
CCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTTGCAAACA
CCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCAGCAGTAC
TCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCACCGGTACT
GTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCCGGAGACT
TGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACACATGAATGCC
GACTGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCC
TCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCC
CGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGTTCGACG
CCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAA
GTTTGGCAAGAAGATGGGCAATGCCGCTATCTTCGGTGCCGGTGCTACGA
TGGGTTCGAACATTGTCAACAGCATCTTCTAGATGAGCATGGCGTCCCAG
TCCGACTTCTTCTCGGCTATGACCAACCGGTCGCTCCGCAACGTCCGATC
GGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACTCCGCAACAGCTCT
CATCCATTCTATCGCAACTACCAAGGGACGATGAACGCAGCAGAGCCCCC
GTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTGTCGTCGCCCAGCA
GCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTTGCAAACACCACCT
TGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCAGCAGTACTCAACC
CCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCACCGGTACTGTCTAT
CGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCCGGAGACTTGGCTC
TGCAACCACACGATCGTATTCAAGTCTTGGAACACATGAATGCCGACTGG
TGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGGAG
CTATGTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGACCA
ACTATGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGTTCGACGCCCCCT
GGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTTGG
CAAGAAGATGGGCAATGCCGCTATCTTCGGTGCCGGTGCTACGATGGGTT
CGAACATTGTCAACAGCATCTTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_51145CAN33_51145Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51145-T1.exon1CAN33_51145-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_51145-T1.exon2CAN33_51145-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_51145-T1.exon3CAN33_51145-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_51145-T1.exon4CAN33_51145-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51145-T1.cdsCAN33_51145-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51145-T1CAN33_51145-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR001452
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
ProductSH3 domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:638809..639797 +
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