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CAN33_51395-T1, CAN33_51395-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51395-T1
Unique NameCAN33_51395-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:776334..777975+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51395-T1 ID=CAN33_51395-T1|Name=CAN33_51395-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1642bp|location=Sequence derived from alignment at NKJJ01000020.1:776334..777975+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGTATGTGCTA
CTAAAACATCTTTTGCTTTATGCTTTTTTTTTTCTTTTCCTACAAAAGCG
AGTTTGTGGTTTTTATCGATCACTTTGCTGGAGATTGGGGCTCGCTCCCA
AGTCAGCAGAGGAAAGAGAGATAACCGCCACATTCCATCATCGGAACATC
TTTCAAAAGAAACAAGCTGACCAGAAACTTCACCTCAATAGGACAGATCG
AGACTAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAG
CCCGAGCTGCTTCGCGGTATGTGATACAAATTTTATCATCGCCCTGGTGG
GGTCTGTGCCAACATGTTCTGACGACGTCCAGGTGTCTACGCCTACGGTT
TTGAGCGTCCCTCCGCTATCCAGCAGCGTGCCATCAAGCCCATCATTGCC
GGTACGTCTCCCCCCGCGCGATCGCCTATAATCTATGATGCTAACTAGAG
CATCCCAGGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGA
CTGCCACTTTCTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAG
GCTTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGAT
CCAGAAGGTCGTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCACG
CCTGCATTGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCC
GGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGA
GCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGG
CTGATGAGATGCTTTCTGTAAGTCCATACCAGATCTGGGCCCAGGGAAGA
CGTGCCTTTGCTAATAAATGTGATTAGCGTGGTTTCACCGAGCAAATCTA
CGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTGTCCG
CTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCGTGAC
CCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTATCAA
GCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACCCTCT
CCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCATCTTCTGTAAC
ACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTGACTT
CACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGATGTTA
TCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCACTGAC
CTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCAACTA
CGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGTGGTG
GTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGACGAT
GTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCGAGGA
GATGCCCATGAACGTTGCTGGTAAGCTAGCCTTCACCCACACTCTGATTA
TCGTATCTTCCATACTGATTTTTGGTTCCAGACCTCATCTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:776334..777975+

>CAN33_51395-T1 ID=CAN33_51395-T1|Name=CAN33_51395-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7182bp|location=Sequence derived from alignment at NKJJ01000020.1:776334..777975+ (Aspergillus niger FDAARGOS_311)
ATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGA
GACTAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGC
CCGAGCTGCTTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCT
ATCCAGCAGCGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGC
TCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTC
TCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCT
CCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGG
TGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCC
GTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACC
CCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCA
GATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTT
TCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAG
GTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCAC
CAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTA
CCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGG
AAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGC
CGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGC
TCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAG
GGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGT
CCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCT
CCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCAC
CGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTT
CGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACA
GCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATG
GCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGAC
TAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCG
AGCTGCTTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATC
CAGCAGCGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCA
GGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCC
AGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCC
ACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGGTGA
CTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTG
ACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCC
GGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGAT
GAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCA
CCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTC
ACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAA
GTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCC
TTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAG
CTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGT
CATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCA
CTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGC
CAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCT
GATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCC
TGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGT
ATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGT
CACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCA
CCCAGATCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCT
TCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAA
CTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGC
TGCTTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAG
CAGCGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGC
TCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGA
AGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACC
CGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGGTGACTT
CATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACG
ACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGT
CGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAA
GCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCG
AGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACC
CTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTT
CATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTG
AGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTC
GACACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCAT
CTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTG
CCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAG
CGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGAT
CGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGG
TCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATC
GGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCAC
CGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCC
AGATCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCTTCT
AACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAACTA
CGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGC
TTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAG
CGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGCTCA
GTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGA
TTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGT
GAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGGTGACTTCAT
GAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACGACA
TGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGT
ATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCT
CTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCGAGC
AAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTG
CTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCAT
GCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGG
GTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGAC
ACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCATCTT
CTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCC
GTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGT
GATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGC
CACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCA
TCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGT
CGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGC
TGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGA
TCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCTTCTAAC
GACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAACTACGA
TGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTC
GCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGT
GCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGCTCAGTC
TGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGATTG
ACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAG
TTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGGTGACTTCATGAA
CATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACGACATGA
ACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATC
CACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTT
CATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCGAGCAAA
TCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTG
TCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCG
TGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTA
TCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACC
CTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCATCTTCTG
TAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTG
ACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGAT
GTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCAC
TGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCA
ACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGT
GGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGA
CGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCG
AGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCTTCTAACGAC
AAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAACTACGATGA
GGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCG
GTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGTGCC
ATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGCTCAGTCTGG
TACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGATTGACC
AGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTG
GCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGGTGACTTCATGAACAT
TGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACGACATGAACG
CCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCAC
GATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTTCAT
CCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCGAGCAAATCT
ACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTGTCC
GCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCGTGA
CCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTATCA
AGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACCCTC
TCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCATCTTCTGTAA
CACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTGACT
TCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGATGTT
ATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCACTGA
CCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCAACT
ACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGTGGT
GGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGACGA
TGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCGAGG
AGATGCCCATGAACGTTGCTGACCTCATCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF1CAN33_51395Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51395-T1CAN33_51395-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51395-T1.exon1CAN33_51395-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_51395-T1.exon2CAN33_51395-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_51395-T1.exon3CAN33_51395-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_51395-T1.exon4CAN33_51395-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_51395-T1.exon5CAN33_51395-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_51395-T1.exon6CAN33_51395-T1.exon6Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51395-T1.cdsCAN33_51395-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Producttranslation initiation factor eIF4A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:776334..777975 +
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