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CAN33_5160-T1, CAN33_5160-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5160-T1
Unique NameCAN33_5160-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:837277..838882-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5160-T1 ID=CAN33_5160-T1|Name=CAN33_5160-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1606bp|location=Sequence derived from alignment at NKJJ01000019.1:837277..838882- (Aspergillus niger FDAARGOS_311)
ATGAGTCTCCTTCGCTCCTCGCTGCGGAGGATAGGGTCGCCAGGCGATCC
TAGCAGGATATGCTCCCAATGTCTTCTACATCGAAATCGGACCCCTCGAA
CCTTCCCCGCCGCTCTCCGCACCTTCACCTCGTCCTTTCGATCCCACTCG
GGCATTGCAGACGGCCATTCCGCTCAGTCGGCTCTAAATAAGACTTATTT
CTCGGCCAATCGCGCCGAAGATGGCACCCCGAGCAAGAATGGCATTGCCT
CCTCGCTCTCCGGCGGCAATGTCTCCTCCAGCGCGACATCTCCTCTCCCA
TCAGACCACCGCGTCGATGCCTCCACGTCTGCCCCCGAATCCACACAACC
AGAGCTCCCTCATCGCCGGAGGAAGCGTTTAAAGGAAGAAGCGAATGCCC
AAACCGCCGATTCTGAACATGTCATTCCCCCCGATGCCTCCGCACAGCTA
TCCGCCTTCTCTTCCGCCCAGCCCACCTCTTCCCTCCGCCGTAAGATGGC
TGCTTTCCTCGCCCTCTGCAAGCCTCGCCTCTCCGTCCTCATCGTGCTGA
GCACCACCTCCGCCTATGGCCTGTATCCGATCTCGTCCCTCCTTACGCTC
GATCCGTCCATGACTCCGTTACCAACCCTCTCCACCTCAACCCTAACCTT
CCTCTACCTGACGGCGGGCACCTTCCTCTCCAGCTGCAGCGCCAACACCA
TCAATATGTTTCTGGAGCCGAAATACGATGCTCTCATGTCGCGCACCCGC
AACAGGCCTCTCGTCCGTGGCCTTATCTCCCGCCGTGCCGCCGTACTCTT
CGCTCTCGCGACTGCCCTCACTGGTGTCGGCATGCTCTACTTCGGCACTA
ACCCCACTGTCGCGGCCCTCTCAGCAAGCAACATCATCCTATACGGCTTC
ATCTACACCCCGCTCAAGCGCCTTCATGTCATCAACACCTGGGTCGGTGC
CATTGTAGGCGGTATTCCCCCGTTGATGGGCTGGGTCGCTGCTGCCGGCC
AAACCGCTACCACGGGCCACGATACCTGGCGGGACATGCTCTTCAGCCAA
GACAGCATCGGTGGTTGGCTGCTTGGCGGTATTCTGTTTGCATGGCAATT
CCCCCACTTCAACGCCTTGTCTCATACCATCCGCGAAGAGTACAAGCGCG
CCGGCTACAAGATGCTCTGCTGGAAGAACCCTGCTATGAACGCCCGCGTC
GCGCTGCGCTATTCCATCCTCATGTTCCCCATCTCCATTGGACTCTGGTG
GGTCGGAGTCGTCGGTCACGGATTCTTGGTTAGCAGCTCGGTCGCGAATG
CTTGGTTGGTGAAGGAGGCGTACCATTTCTGGAAGCACCAGGGCGCCAAC
GGAACGGCGAGAGGTCTCTTCTGGGCTAGTATCTGGCAGCTTCCGGTTCT
GCTGGTGGGTGGTCTCGTTACCAAGAAGGGTCTCTGGGATGGTGTATGGC
GTCAGATTTTCGGGCAGCCAGATGAGCTAGAGGATGAGTATGTGTATGTT
GACGAGGAAGAGGAAGGTACTGCTTCTGCTGTGGCTGCCTCGCGCTCCAA
AGCAGCGGCGACTCGCGTCGTATGACCAAGATCCTGCTCCGATCGGAACC
GAATAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:837277..838882-

>CAN33_5160-T1 ID=CAN33_5160-T1|Name=CAN33_5160-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2988bp|location=Sequence derived from alignment at NKJJ01000019.1:837277..838882- (Aspergillus niger FDAARGOS_311)
CGGCGACTCGCGTCGTATGACCAAGATCCTGCTCCGATCGGAACCGAATA
AATGAGTCTCCTTCGCTCCTCGCTGCGGAGGATAGGGTCGCCAGGCGATC
CTAGCAGGATATGCTCCCAATGTCTTCTACATCGAAATCGGACCCCTCGA
ACCTTCCCCGCCGCTCTCCGCACCTTCACCTCGTCCTTTCGATCCCACTC
GGGCATTGCAGACGGCCATTCCGCTCAGTCGGCTCTAAATAAGACTTATT
TCTCGGCCAATCGCGCCGAAGATGGCACCCCGAGCAAGAATGGCATTGCC
TCCTCGCTCTCCGGCGGCAATGTCTCCTCCAGCGCGACATCTCCTCTCCC
ATCAGACCACCGCGTCGATGCCTCCACGTCTGCCCCCGAATCCACACAAC
CAGAGCTCCCTCATCGCCGGAGGAAGCGTTTAAAGGAAGAAGCGAATGCC
CAAACCGCCGATTCTGAACATGTCATTCCCCCCGATGCCTCCGCACAGCT
ATCCGCCTTCTCTTCCGCCCAGCCCACCTCTTCCCTCCGCCGTAAGATGG
CTGCTTTCCTCGCCCTCTGCAAGCCTCGCCTCTCCGTCCTCATCGTGCTG
AGCACCACCTCCGCCTATGGCCTGTATCCGATCTCGTCCCTCCTTACGCT
CGATCCGTCCATGACTCCGTTACCAACCCTCTCCACCTCAACCCTAACCT
TCCTCTACCTGACGGCGGGCACCTTCCTCTCCAGCTGCAGCGCCAACACC
ATCAATATGTTTCTGGAGCCGAAATACGATGCTCTCATGTCGCGCACCCG
CAACAGGCCTCTCGTCCGTGGCCTTATCTCCCGCCGTGCCGCCGTACTCT
TCGCTCTCGCGACTGCCCTCACTGGTGTCGGCATGCTCTACTTCGGCACT
AACCCCACTGTCGCGGCCCTCTCAGCAAGCAACATCATCCTATACGGCTT
CATCTACACCCCGCTCAAGCGCCTTCATGTCATCAACACCTGGGTCGGTG
CCATTGTAGGCGGTATTCCCCCGTTGATGGGCTGGGTCGCTGCTGCCGGC
CAAACCGCTACCACGGGCCACGATACCTGGCGGGACATGCTCTTCAGCCA
AGACAGCATCGGTGGTTGGCTGCTTGGCGGTATTCTGTTTGCATGGCAAT
TCCCCCACTTCAACGCCTTGTCTCATACCATCCGCGAAGAGTACAAGCGC
GCCGGCTACAAGATGCTCTGCTGGAAGAACCCTGCTATGAACGCCCGCGT
CGCGCTGCGCTATTCCATCCTCATGTTCCCCATCTCCATTGGACTCTGGT
GGGTCGGAGTCGTCGGTCACGGATTCTTGGTTAGCAGCTCGGTCGCGAAT
GCTTGGTTGGTGAAGGAGGCGTACCATTTCTGGAAGCACCAGGGCGCCAA
CGGAACGGCGAGAGGTCTCTTCTGGGCTAGTATCTGGCAGCTTCCGGTTC
TGCTGGTGGGTGGTCTCGTTACCAAGAAGGGTCTCTGGGATGGTCGGCGA
CTCGCGTCGTATGACCAAGATCCTGCTCCGATCGGAACCGAATAAATGAG
TCTCCTTCGCTCCTCGCTGCGGAGGATAGGGTCGCCAGGCGATCCTAGCA
GGATATGCTCCCAATGTCTTCTACATCGAAATCGGACCCCTCGAACCTTC
CCCGCCGCTCTCCGCACCTTCACCTCGTCCTTTCGATCCCACTCGGGCAT
TGCAGACGGCCATTCCGCTCAGTCGGCTCTAAATAAGACTTATTTCTCGG
CCAATCGCGCCGAAGATGGCACCCCGAGCAAGAATGGCATTGCCTCCTCG
CTCTCCGGCGGCAATGTCTCCTCCAGCGCGACATCTCCTCTCCCATCAGA
CCACCGCGTCGATGCCTCCACGTCTGCCCCCGAATCCACACAACCAGAGC
TCCCTCATCGCCGGAGGAAGCGTTTAAAGGAAGAAGCGAATGCCCAAACC
GCCGATTCTGAACATGTCATTCCCCCCGATGCCTCCGCACAGCTATCCGC
CTTCTCTTCCGCCCAGCCCACCTCTTCCCTCCGCCGTAAGATGGCTGCTT
TCCTCGCCCTCTGCAAGCCTCGCCTCTCCGTCCTCATCGTGCTGAGCACC
ACCTCCGCCTATGGCCTGTATCCGATCTCGTCCCTCCTTACGCTCGATCC
GTCCATGACTCCGTTACCAACCCTCTCCACCTCAACCCTAACCTTCCTCT
ACCTGACGGCGGGCACCTTCCTCTCCAGCTGCAGCGCCAACACCATCAAT
ATGTTTCTGGAGCCGAAATACGATGCTCTCATGTCGCGCACCCGCAACAG
GCCTCTCGTCCGTGGCCTTATCTCCCGCCGTGCCGCCGTACTCTTCGCTC
TCGCGACTGCCCTCACTGGTGTCGGCATGCTCTACTTCGGCACTAACCCC
ACTGTCGCGGCCCTCTCAGCAAGCAACATCATCCTATACGGCTTCATCTA
CACCCCGCTCAAGCGCCTTCATGTCATCAACACCTGGGTCGGTGCCATTG
TAGGCGGTATTCCCCCGTTGATGGGCTGGGTCGCTGCTGCCGGCCAAACC
GCTACCACGGGCCACGATACCTGGCGGGACATGCTCTTCAGCCAAGACAG
CATCGGTGGTTGGCTGCTTGGCGGTATTCTGTTTGCATGGCAATTCCCCC
ACTTCAACGCCTTGTCTCATACCATCCGCGAAGAGTACAAGCGCGCCGGC
TACAAGATGCTCTGCTGGAAGAACCCTGCTATGAACGCCCGCGTCGCGCT
GCGCTATTCCATCCTCATGTTCCCCATCTCCATTGGACTCTGGTGGGTCG
GAGTCGTCGGTCACGGATTCTTGGTTAGCAGCTCGGTCGCGAATGCTTGG
TTGGTGAAGGAGGCGTACCATTTCTGGAAGCACCAGGGCGCCAACGGAAC
GGCGAGAGGTCTCTTCTGGGCTAGTATCTGGCAGCTTCCGGTTCTGCTGG
TGGGTGGTCTCGTTACCAAGAAGGGTCTCTGGGATGGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031966mitochondrial membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0048034heme O biosynthetic process
GO:0006783heme biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0008495protoheme IX farnesyltransferase activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX10CAN33_5160Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5160-T1CAN33_5160-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5160-T1.cdsCAN33_5160-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5160-T1.exon2CAN33_5160-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_5160-T1.exon1CAN33_5160-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR030470
DBxrefInterPro:IPR006369
DBxrefInterPro:IPR016315
DBxrefInterPro:IPR000537
DBxrefPFAM:PF01040
Product mitochondrial
ProductProtoheme IX farnesyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:837277..838882 -
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