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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:839135..840087+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_5165-T1 ID=CAN33_5165-T1|Name=CAN33_5165-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=953bp|location=Sequence derived from alignment at NKJJ01000019.1:839135..840087+ (Aspergillus niger FDAARGOS_311)
ATGGACGCGATCCAGAAAACCATCGTCGATCCCCTCCAACCCCTCCTCCG
CCCCGTCGTTTCGGCCTTGCCCGAACCGGTTCACGATGCGATCATTTCGC
TGATCGGCTCCTCCTGCCACAACAGCCTCGTGGTCGATCTTGACGTGAGC
AAGGACCCGGCCTGCACCTCCCTTGCTATTTCGAAGGCCCTTGGTATTGC
TATCGTCGGAGCTAGCGGCATTGTCAAGGTGCCCCAGATCCTCAAGCTGA
TCGGCTCCCGCTCATCTGCCGGTGTTTCCTTCGTTTCGTACGCCCTCGAG
ACCGCCAGTCTTCTGATTACGCTGTCCTACAGCGTGCGCAACCAGTTCCC
GTTCAGCACCTTCGGCGAGACGGCTTTGATTGCGGTACAAGATGTAGTGG
TGGGCGTGCTGGTGTTGACATTTGCGGGCCGGTCTTCCGCTGCGGCGGCC
TTCATTGCCGTCGTGGCAGCAAGCGTGTATGCGCTGCTTTTTGATCAGAC
TCTGGTGGATGCGCAGACAATGGCTATGCTGCAGGCTGGAGCTGGAGCTC
TGGGTGTTGCGAGCAAGGCGCCTCAAATCTATACTATCTGGCGTGAGGGT
GGCACTGGCCAGCTGAGTGCTTTTGCAGTAGGTGCACCTCGTTACTTGTC
GGTAATTGTTTACTAACACATAGTCAGGTCTTCAACTATCTCGCTGGTTC
CCTGTCTCGCATCTTCACCACCCTCCAAGAGGTTGACGACAAGCTGATCC
TGTACGGCTTCATTGCCGGGTTCACTCTCAACCTCATTCTGGCCGGCCAA
ATGCTGTACTACTGGAACAGCCCGGCCAAGTCCCAGAAGAAGGAGAAGCC
CGTGGCAGCACCTACTCCCGCCAAGACGCCAGCTGCTGCCACCAGCTCGG
GGGTGTCCCCAAAGCCATCAGGCAAGACGCCCACCACTCGACGCCGGGGC
TAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:839135..840087+ >CAN33_5165-T1 ID=CAN33_5165-T1|Name=CAN33_5165-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1806bp|location=Sequence derived from alignment at NKJJ01000019.1:839135..840087+ (Aspergillus niger FDAARGOS_311)
ATGGACGCGATCCAGAAAACCATCGTCGATCCCCTCCAACCCCTCCTCCG
CCCCGTCGTTTCGGCCTTGCCCGAACCGGTTCACGATGCGATCATTTCGC
TGATCGGCTCCTCCTGCCACAACAGCCTCGTGGTCGATCTTGACGTGAGC
AAGGACCCGGCCTGCACCTCCCTTGCTATTTCGAAGGCCCTTGGTATTGC
TATCGTCGGAGCTAGCGGCATTGTCAAGGTGCCCCAGATCCTCAAGCTGA
TCGGCTCCCGCTCATCTGCCGGTGTTTCCTTCGTTTCGTACGCCCTCGAG
ACCGCCAGTCTTCTGATTACGCTGTCCTACAGCGTGCGCAACCAGTTCCC
GTTCAGCACCTTCGGCGAGACGGCTTTGATTGCGGTACAAGATGTAGTGG
TGGGCGTGCTGGTGTTGACATTTGCGGGCCGGTCTTCCGCTGCGGCGGCC
TTCATTGCCGTCGTGGCAGCAAGCGTGTATGCGCTGCTTTTTGATCAGAC
TCTGGTGGATGCGCAGACAATGGCTATGCTGCAGGCTGGAGCTGGAGCTC
TGGGTGTTGCGAGCAAGGCGCCTCAAATCTATACTATCTGGCGTGAGGGT
GGCACTGGCCAGCTGAGTGCTTTTGCAGTCTTCAACTATCTCGCTGGTTC
CCTGTCTCGCATCTTCACCACCCTCCAAGAGGTTGACGACAAGCTGATCC
TGTACGGCTTCATTGCCGGGTTCACTCTCAACCTCATTCTGGCCGGCCAA
ATGCTGTACTACTGGAACAGCCCGGCCAAGTCCCAGAAGAAGGAGAAGCC
CGTGGCAGCACCTACTCCCGCCAAGACGCCAGCTGCTGCCACCAGCTCGG
GGGTGTCCCCAAAGCCATCAGGCAAGACGCCCACCACTCGACGCCGGGGC
TAGATGGACGCGATCCAGAAAACCATCGTCGATCCCCTCCAACCCCTCCT
CCGCCCCGTCGTTTCGGCCTTGCCCGAACCGGTTCACGATGCGATCATTT
CGCTGATCGGCTCCTCCTGCCACAACAGCCTCGTGGTCGATCTTGACGTG
AGCAAGGACCCGGCCTGCACCTCCCTTGCTATTTCGAAGGCCCTTGGTAT
TGCTATCGTCGGAGCTAGCGGCATTGTCAAGGTGCCCCAGATCCTCAAGC
TGATCGGCTCCCGCTCATCTGCCGGTGTTTCCTTCGTTTCGTACGCCCTC
GAGACCGCCAGTCTTCTGATTACGCTGTCCTACAGCGTGCGCAACCAGTT
CCCGTTCAGCACCTTCGGCGAGACGGCTTTGATTGCGGTACAAGATGTAG
TGGTGGGCGTGCTGGTGTTGACATTTGCGGGCCGGTCTTCCGCTGCGGCG
GCCTTCATTGCCGTCGTGGCAGCAAGCGTGTATGCGCTGCTTTTTGATCA
GACTCTGGTGGATGCGCAGACAATGGCTATGCTGCAGGCTGGAGCTGGAG
CTCTGGGTGTTGCGAGCAAGGCGCCTCAAATCTATACTATCTGGCGTGAG
GGTGGCACTGGCCAGCTGAGTGCTTTTGCAGTCTTCAACTATCTCGCTGG
TTCCCTGTCTCGCATCTTCACCACCCTCCAAGAGGTTGACGACAAGCTGA
TCCTGTACGGCTTCATTGCCGGGTTCACTCTCAACCTCATTCTGGCCGGC
CAAATGCTGTACTACTGGAACAGCCCGGCCAAGTCCCAGAAGAAGGAGAA
GCCCGTGGCAGCACCTACTCCCGCCAAGACGCCAGCTGCTGCCACCAGCT
CGGGGGTGTCCCCAAAGCCATCAGGCAAGACGCCCACCACTCGACGCCGG
GGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016817 |
| DBxref | InterPro:IPR006603 |
| DBxref | PFAM:PF04193 |
| Product | PQ loop repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:839135..840087 + |
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