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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:990526..993923- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_51710-T1 ID=CAN33_51710-T1|Name=CAN33_51710-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=3398bp|location=Sequence derived from alignment at NKJJ01000020.1:990526..993923- (Aspergillus niger FDAARGOS_311)
ATGCCTGGCCGATCCGCCCGTTCAACATCCACCGCCACGCGCAAGACCTC
CGCTCAGCCCTCGCGCGCAGGCTCAGTGACACCGTCTTTCACTATTCCCG
AGGAGCCGTCTCTTCCAGAGGCTATTCCCACCTTGCGCCGCGATGTATGC
TCTATTTTCGCCGATGCGCAGCGTTCGACAACCGGACATCGGAAACTCGT
TGTCCGACTGAGGAAGCTCCAAGAAGCTTGCTGCGGCATAACCCAGAAAA
GCTCCAAGAAGGATGGCAGCAAACCCAAAGCAGAGTGGTCGCTTCCCATG
GAAGAGACTCTGCCCGAGACGGAATTCAACACAGAGGTCGGACGCTGCGT
CCTTCGCATTCTTCCTATCAAGAAATCAGAGCCGGTCGGCGACCGGATCC
TACGCTTTCTCGGCGCATTCCTGGCATTAGCTTCCGAGAAGGATGCAGAG
CTATATGCTGCCGATGACGACGATGAAGATATGCAGAATTCGCCTGAGAC
ACCAACTTCCCGCCTCACGACCAGTCTGATCAACATAATCGTTCCCCTGT
TAGCAACCAAGGACAAAACGGTCCGCTTTCGCGCCACTCAAATCATCGCC
CACATTGTCAACTCCCTCGAAACGATAGACGATGACCAATATCACGCCAT
CCGCGGCGGTCTTGTGAAGCGCATTCGAGACAAAGAGCCTGCCGTAAGAG
TGCAGGCTGTCATGGGACTTGGACGTCTCGCAGGCAACGACGACGAAGAT
GACGATGACAGCAAGGCTGTTCTCGAGCGACTCATCGATATTATGCAGAA
TGATACAAGTGCCGATGTACGAAAGACCCTGCTTATCAACCTCCCTCTGG
TGCCGGGCACCCTAAAATATCTCCTGGAACGAGCCCGCGATCTCGATGCG
GCCACTCGACGTGCCTTGTACTCGCGCCTTCTTCCCACCCTGGGTGACTT
CCGACATTTGTCGCTGTCTATGCGAGAGAAGCTTCTTAGATGGGGTCTGC
GTGACCGAGACGAGAGCGTTCGCAAGGCCACGGGCAAATTGTTCTACGAC
CGCTGGATTGAAGACTGCGCTGGAACCAACAACGACCCTGAAGCTGGCCC
TACTGGCCAACGCTCCCCACCGAACTTCAACGGGCTCCTCGAGCTTCTCG
AGAGAATTGATGTTGTCAACTCCGGAGTAGAGTCTGGAATTGCACATGAA
GCCATGCGTAGCTTCTGGGAAGGCCGCCCGGACTATCGGGAGGCGGTCGT
TTTCGACGAGCCTTTCTGGGAGAATCTTACCGCAGAATCTGCCTTTATGA
TCCGGTCTTTCAGCGACTTTTGCCGCGTTGAGCATGAAGGGAAGTACGAC
AAACTTGCAGACGAGAAGATGCCCGAAGTCACAGCCCTCGCGTTTTACCT
ACACAAGTACATGACCGACCTGTTGCAGCGGAAGAAGATCGCCAAAGAGA
CCGGTGATGCCAATGATGACGATTCTGTGGAGCAAGAATTTGTGGTGGAA
CAGCTGCTGCATATTTCCATGACTCTGGATTACAGTGATGAAGTTGGACG
GCGCAAGATGTTCTCCCTACTGCGTGAGTCGCTTGCCGTTCCAGAACTCC
CTCAGGAGTGCACCAAGCTTGCGGTCGAGACCCTGCGATGTGTTTGCGGT
CCTAATGCCGCGGCCGAGAACGAATTCTGTAGCGTTGTCCTGGAGGCGAT
TGCTGAAGTACACGACACCATTGTGACCGAGGACAGCTTTGTGTCTGCAA
GGTCCGAAATTAGTGATGCCAGCTCCACCCGCCACCGATCCGAGACTCCT
CAGTCCGAGGAAGAGAAGCCATTCAACAAAGAGGAGGCTAAAGCGAAGGT
CCTGAAGGAGATCATGGTCAACATGAAATGTCTGCACATTGCGCAGTGCA
TGCTGCAGAATGTCGAGGGCAACCTCCAGGCCAACATGAACTTAGTGACT
ATGCTTAACAACCTCGTCGTGCCTGCCGTTCGGAGTCACGAGGCCCCCAT
CCGTGAGCGGGGTCTCGAGTGTCTGGGTCTTTGCTGTCTACTCGATAAGG
TACGAACTGCTCTATGAACTGCTTGCGATGTCCTACTGACGTTTTACAGA
ACTTGGCTGAGGAGAACATGACCCTCTTCATCCACTGCTTCAGCAAGGGC
CACGAGGCCTTGCAGGTGACTGCCATCCACATCTTGTGTGATATGCTGAC
AACGCATCCCACGTTGCTTGTGCCTGTGGAACAATCCGATGGCGAGACCG
TGGCCCCGCCGGTTTTCCAGAAGCCACTGTTGAAAGTCTTTGCTCGGGCG
CTGAAGTCCAGCTCGCCTAACAGCGTGCAAACAGCTGCCGCCACCGCCCT
CTCGAAGTTGTTGCTCACGAATACGTTCACACCAGCGGGATCAAACATCC
CCCAGGCCATTCATGAATATAACCAGACTGCCGTTGAGACCCTCCTGCAG
TCACTCATCCTTTCCTTCTTCCATCCTCGTACTCGGGACAACCCTGCGCT
GAGACAGGCCTTGGCGTACTTCTTCCCGGTGTATTGCCATTCGCGACTGG
ACAACACGCAGCACATGCGAAAGGTCGCGGTTCCCGTCATTCGGGCCACT
CTCAATGCCGCCGAAGAGTTCTACTCGCTTGAGGCCGAGGAAGACAGCGA
TGGTGATATCGATGAGACGGTTGGTCAGCGAGAGCTGAAGGCACTGATGA
CTGGCGTGGTGGGTATGCTGGCTGAGTGGACTGATGAGCGGCGGGTCGTC
GGACTGGGCGGGGAGAGGATCCTTGCGGGTGGTCCGGCCAACGCCAATGC
TTGCGGGTTCGTCCACCTTGCCTTGGTCAAGGATATCCTCGAGCGGGTCC
TAGGAATCAGCACGGGCACCAACCGTTGCTCCAAGGAAGAGAAGAAGCTG
CTCTTCTCGCTTATGAGCAAGCTCTATATTGCTCCTCCTGTCGTTCCCTC
GCGGTCCGGGTCCCGGGCTCCTGAAGGCGAGGATCCGTTCAGTTCCAGCG
TTCGCAGTGCGCAGGCGGAAATCACACCGGAAAATAAGGAGCTGGCGCAG
GAGGTGAAGGAGTTGCTGGATGAGACAATCGAGGAAGGCCTGGCTGCCGA
GGCTGCCGGGCGAAACGCGCTCGTCAAGGTCAAGAATGCGGTTCTCAAGC
TTCTAGCCGCGGCTCATGGAGGACGCCCGGCCAGTGGGCGAGCCCGCGAA
GGCATGGAAGAAGGCGACAGCGATGTCATGAGTGTGCGGTCGAACATGAG
CGTCCGGTCTGGCAGCGTGCGGCCGTCCATTGAGCCGGGGACCATGCGCC
GGGGCTTCTCCCTGGAGCCAAGTATCATCGAGGAAGAAGATGAAAACGAC
GATAGCCGGACCACGATTGTCAAGTCGGAGGGTCAGGATGACGAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:990526..993923- >CAN33_51710-T1 ID=CAN33_51710-T1|Name=CAN33_51710-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6696bp|location=Sequence derived from alignment at NKJJ01000020.1:990526..993923- (Aspergillus niger FDAARGOS_311)
AACTTGGCTGAGGAGAACATGACCCTCTTCATCCACTGCTTCAGCAAGGG
CCACGAGGCCTTGCAGGTGACTGCCATCCACATCTTGTGTGATATGCTGA
CAACGCATCCCACGTTGCTTGTGCCTGTGGAACAATCCGATGGCGAGACC
GTGGCCCCGCCGGTTTTCCAGAAGCCACTGTTGAAAGTCTTTGCTCGGGC
GCTGAAGTCCAGCTCGCCTAACAGCGTGCAAACAGCTGCCGCCACCGCCC
TCTCGAAGTTGTTGCTCACGAATACGTTCACACCAGCGGGATCAAACATC
CCCCAGGCCATTCATGAATATAACCAGACTGCCGTTGAGACCCTCCTGCA
GTCACTCATCCTTTCCTTCTTCCATCCTCGTACTCGGGACAACCCTGCGC
TGAGACAGGCCTTGGCGTACTTCTTCCCGGTGTATTGCCATTCGCGACTG
GACAACACGCAGCACATGCGAAAGGTCGCGGTTCCCGTCATTCGGGCCAC
TCTCAATGCCGCCGAAGAGTTCTACTCGCTTGAGGCCGAGGAAGACAGCG
ATGGTGATATCGATGAGACGGTTGGTCAGCGAGAGCTGAAGGCACTGATG
ACTGGCGTGGTGGGTATGCTGGCTGAGTGGACTGATGAGCGGCGGGTCGT
CGGACTGGGCGGGGAGAGGATCCTTGCGGGTGGTCCGGCCAACGCCAATG
CTTGCGGGTTCGTCCACCTTGCCTTGGTCAAGGATATCCTCGAGCGGGTC
CTAGGAATCAGCACGGGCACCAACCGTTGCTCCAAGGAAGAGAAGAAGCT
GCTCTTCTCGCTTATGAGCAAGCTCTATATTGCTCCTCCTGTCGTTCCCT
CGCGGTCCGGGTCCCGGGCTCCTGAAGGCGAGGATCCGTTCAGTTCCAGC
GTTCGCAGTGCGCAGGCGGAAATCACACCGGAAAATAAGGAGCTGGCGCA
GGAGGTGAAGGAGTTGCTGGATGAGACAATCGAGGAAGGCCTGGCTGCCG
AGGCTGCCGGGCGAAACGCGCTCGTCAAGGTCAAGAATGCGGTTCTCAAG
CTTCTAGCCGCGGCTCATGGAGGACGCCCGGCCAGTGGGCGAGCCCGCGA
AGGCATGGAAGAAGGCGACAGCGATGTCATGAGTGTGCGGTCGAACATGA
GCGTCCGGTCTGGCAGCGTGCGGCCGTCCATTGAGCCGGGGACCATGCGC
CGGGGCTTCTCCCTGGAGCCAAGTATCATCGAGGAAGAAGATGAAAACGA
CGATAGCCGGACCACGATTGTCAAGTCGGAGGGTCAGGATGACGAGTAAA
TGCCTGGCCGATCCGCCCGTTCAACATCCACCGCCACGCGCAAGACCTCC
GCTCAGCCCTCGCGCGCAGGCTCAGTGACACCGTCTTTCACTATTCCCGA
GGAGCCGTCTCTTCCAGAGGCTATTCCCACCTTGCGCCGCGATGTATGCT
CTATTTTCGCCGATGCGCAGCGTTCGACAACCGGACATCGGAAACTCGTT
GTCCGACTGAGGAAGCTCCAAGAAGCTTGCTGCGGCATAACCCAGAAAAG
CTCCAAGAAGGATGGCAGCAAACCCAAAGCAGAGTGGTCGCTTCCCATGG
AAGAGACTCTGCCCGAGACGGAATTCAACACAGAGGTCGGACGCTGCGTC
CTTCGCATTCTTCCTATCAAGAAATCAGAGCCGGTCGGCGACCGGATCCT
ACGCTTTCTCGGCGCATTCCTGGCATTAGCTTCCGAGAAGGATGCAGAGC
TATATGCTGCCGATGACGACGATGAAGATATGCAGAATTCGCCTGAGACA
CCAACTTCCCGCCTCACGACCAGTCTGATCAACATAATCGTTCCCCTGTT
AGCAACCAAGGACAAAACGGTCCGCTTTCGCGCCACTCAAATCATCGCCC
ACATTGTCAACTCCCTCGAAACGATAGACGATGACCAATATCACGCCATC
CGCGGCGGTCTTGTGAAGCGCATTCGAGACAAAGAGCCTGCCGTAAGAGT
GCAGGCTGTCATGGGACTTGGACGTCTCGCAGGCAACGACGACGAAGATG
ACGATGACAGCAAGGCTGTTCTCGAGCGACTCATCGATATTATGCAGAAT
GATACAAGTGCCGATGTACGAAAGACCCTGCTTATCAACCTCCCTCTGGT
GCCGGGCACCCTAAAATATCTCCTGGAACGAGCCCGCGATCTCGATGCGG
CCACTCGACGTGCCTTGTACTCGCGCCTTCTTCCCACCCTGGGTGACTTC
CGACATTTGTCGCTGTCTATGCGAGAGAAGCTTCTTAGATGGGGTCTGCG
TGACCGAGACGAGAGCGTTCGCAAGGCCACGGGCAAATTGTTCTACGACC
GCTGGATTGAAGACTGCGCTGGAACCAACAACGACCCTGAAGCTGGCCCT
ACTGGCCAACGCTCCCCACCGAACTTCAACGGGCTCCTCGAGCTTCTCGA
GAGAATTGATGTTGTCAACTCCGGAGTAGAGTCTGGAATTGCACATGAAG
CCATGCGTAGCTTCTGGGAAGGCCGCCCGGACTATCGGGAGGCGGTCGTT
TTCGACGAGCCTTTCTGGGAGAATCTTACCGCAGAATCTGCCTTTATGAT
CCGGTCTTTCAGCGACTTTTGCCGCGTTGAGCATGAAGGGAAGTACGACA
AACTTGCAGACGAGAAGATGCCCGAAGTCACAGCCCTCGCGTTTTACCTA
CACAAGTACATGACCGACCTGTTGCAGCGGAAGAAGATCGCCAAAGAGAC
CGGTGATGCCAATGATGACGATTCTGTGGAGCAAGAATTTGTGGTGGAAC
AGCTGCTGCATATTTCCATGACTCTGGATTACAGTGATGAAGTTGGACGG
CGCAAGATGTTCTCCCTACTGCGTGAGTCGCTTGCCGTTCCAGAACTCCC
TCAGGAGTGCACCAAGCTTGCGGTCGAGACCCTGCGATGTGTTTGCGGTC
CTAATGCCGCGGCCGAGAACGAATTCTGTAGCGTTGTCCTGGAGGCGATT
GCTGAAGTACACGACACCATTGTGACCGAGGACAGCTTTGTGTCTGCAAG
GTCCGAAATTAGTGATGCCAGCTCCACCCGCCACCGATCCGAGACTCCTC
AGTCCGAGGAAGAGAAGCCATTCAACAAAGAGGAGGCTAAAGCGAAGGTC
CTGAAGGAGATCATGGTCAACATGAAATGTCTGCACATTGCGCAGTGCAT
GCTGCAGAATGTCGAGGGCAACCTCCAGGCCAACATGAACTTAGTGACTA
TGCTTAACAACCTCGTCGTGCCTGCCGTTCGGAGTCACGAGGCCCCCATC
CGTGAGCGGGGTCTCGAGTGTCTGGGTCTTTGCTGTCTACTCGATAAGAA
CTTGGCTGAGGAGAACATGACCCTCTTCATCCACTGCTTCAGCAAGGGCC
ACGAGGCCTTGCAGGTGACTGCCATCCACATCTTGTGTGATATGCTGACA
ACGCATCCCACGTTGCTTGTGCCTGTGGAACAATCCGATGGCGAGACCGT
GGCCCCGCCGGTTTTCCAGAAGCCACTGTTGAAAGTCTTTGCTCGGGCGC
TGAAGTCCAGCTCGCCTAACAGCGTGCAAACAGCTGCCGCCACCGCCCTC
TCGAAGTTGTTGCTCACGAATACGTTCACACCAGCGGGATCAAACATCCC
CCAGGCCATTCATGAATATAACCAGACTGCCGTTGAGACCCTCCTGCAGT
CACTCATCCTTTCCTTCTTCCATCCTCGTACTCGGGACAACCCTGCGCTG
AGACAGGCCTTGGCGTACTTCTTCCCGGTGTATTGCCATTCGCGACTGGA
CAACACGCAGCACATGCGAAAGGTCGCGGTTCCCGTCATTCGGGCCACTC
TCAATGCCGCCGAAGAGTTCTACTCGCTTGAGGCCGAGGAAGACAGCGAT
GGTGATATCGATGAGACGGTTGGTCAGCGAGAGCTGAAGGCACTGATGAC
TGGCGTGGTGGGTATGCTGGCTGAGTGGACTGATGAGCGGCGGGTCGTCG
GACTGGGCGGGGAGAGGATCCTTGCGGGTGGTCCGGCCAACGCCAATGCT
TGCGGGTTCGTCCACCTTGCCTTGGTCAAGGATATCCTCGAGCGGGTCCT
AGGAATCAGCACGGGCACCAACCGTTGCTCCAAGGAAGAGAAGAAGCTGC
TCTTCTCGCTTATGAGCAAGCTCTATATTGCTCCTCCTGTCGTTCCCTCG
CGGTCCGGGTCCCGGGCTCCTGAAGGCGAGGATCCGTTCAGTTCCAGCGT
TCGCAGTGCGCAGGCGGAAATCACACCGGAAAATAAGGAGCTGGCGCAGG
AGGTGAAGGAGTTGCTGGATGAGACAATCGAGGAAGGCCTGGCTGCCGAG
GCTGCCGGGCGAAACGCGCTCGTCAAGGTCAAGAATGCGGTTCTCAAGCT
TCTAGCCGCGGCTCATGGAGGACGCCCGGCCAGTGGGCGAGCCCGCGAAG
GCATGGAAGAAGGCGACAGCGATGTCATGAGTGTGCGGTCGAACATGAGC
GTCCGGTCTGGCAGCGTGCGGCCGTCCATTGAGCCGGGGACCATGCGCCG
GGGCTTCTCCCTGGAGCCAAGTATCATCGAGGAAGAAGATGAAAACGACG
ATAGCCGGACCACGATTGTCAAGTCGGAGGGTCAGGATGACGAGTAAATG
CCTGGCCGATCCGCCCGTTCAACATCCACCGCCACGCGCAAGACCTCCGC
TCAGCCCTCGCGCGCAGGCTCAGTGACACCGTCTTTCACTATTCCCGAGG
AGCCGTCTCTTCCAGAGGCTATTCCCACCTTGCGCCGCGATGTATGCTCT
ATTTTCGCCGATGCGCAGCGTTCGACAACCGGACATCGGAAACTCGTTGT
CCGACTGAGGAAGCTCCAAGAAGCTTGCTGCGGCATAACCCAGAAAAGCT
CCAAGAAGGATGGCAGCAAACCCAAAGCAGAGTGGTCGCTTCCCATGGAA
GAGACTCTGCCCGAGACGGAATTCAACACAGAGGTCGGACGCTGCGTCCT
TCGCATTCTTCCTATCAAGAAATCAGAGCCGGTCGGCGACCGGATCCTAC
GCTTTCTCGGCGCATTCCTGGCATTAGCTTCCGAGAAGGATGCAGAGCTA
TATGCTGCCGATGACGACGATGAAGATATGCAGAATTCGCCTGAGACACC
AACTTCCCGCCTCACGACCAGTCTGATCAACATAATCGTTCCCCTGTTAG
CAACCAAGGACAAAACGGTCCGCTTTCGCGCCACTCAAATCATCGCCCAC
ATTGTCAACTCCCTCGAAACGATAGACGATGACCAATATCACGCCATCCG
CGGCGGTCTTGTGAAGCGCATTCGAGACAAAGAGCCTGCCGTAAGAGTGC
AGGCTGTCATGGGACTTGGACGTCTCGCAGGCAACGACGACGAAGATGAC
GATGACAGCAAGGCTGTTCTCGAGCGACTCATCGATATTATGCAGAATGA
TACAAGTGCCGATGTACGAAAGACCCTGCTTATCAACCTCCCTCTGGTGC
CGGGCACCCTAAAATATCTCCTGGAACGAGCCCGCGATCTCGATGCGGCC
ACTCGACGTGCCTTGTACTCGCGCCTTCTTCCCACCCTGGGTGACTTCCG
ACATTTGTCGCTGTCTATGCGAGAGAAGCTTCTTAGATGGGGTCTGCGTG
ACCGAGACGAGAGCGTTCGCAAGGCCACGGGCAAATTGTTCTACGACCGC
TGGATTGAAGACTGCGCTGGAACCAACAACGACCCTGAAGCTGGCCCTAC
TGGCCAACGCTCCCCACCGAACTTCAACGGGCTCCTCGAGCTTCTCGAGA
GAATTGATGTTGTCAACTCCGGAGTAGAGTCTGGAATTGCACATGAAGCC
ATGCGTAGCTTCTGGGAAGGCCGCCCGGACTATCGGGAGGCGGTCGTTTT
CGACGAGCCTTTCTGGGAGAATCTTACCGCAGAATCTGCCTTTATGATCC
GGTCTTTCAGCGACTTTTGCCGCGTTGAGCATGAAGGGAAGTACGACAAA
CTTGCAGACGAGAAGATGCCCGAAGTCACAGCCCTCGCGTTTTACCTACA
CAAGTACATGACCGACCTGTTGCAGCGGAAGAAGATCGCCAAAGAGACCG
GTGATGCCAATGATGACGATTCTGTGGAGCAAGAATTTGTGGTGGAACAG
CTGCTGCATATTTCCATGACTCTGGATTACAGTGATGAAGTTGGACGGCG
CAAGATGTTCTCCCTACTGCGTGAGTCGCTTGCCGTTCCAGAACTCCCTC
AGGAGTGCACCAAGCTTGCGGTCGAGACCCTGCGATGTGTTTGCGGTCCT
AATGCCGCGGCCGAGAACGAATTCTGTAGCGTTGTCCTGGAGGCGATTGC
TGAAGTACACGACACCATTGTGACCGAGGACAGCTTTGTGTCTGCAAGGT
CCGAAATTAGTGATGCCAGCTCCACCCGCCACCGATCCGAGACTCCTCAG
TCCGAGGAAGAGAAGCCATTCAACAAAGAGGAGGCTAAAGCGAAGGTCCT
GAAGGAGATCATGGTCAACATGAAATGTCTGCACATTGCGCAGTGCATGC
TGCAGAATGTCGAGGGCAACCTCCAGGCCAACATGAACTTAGTGACTATG
CTTAACAACCTCGTCGTGCCTGCCGTTCGGAGTCACGAGGCCCCCATCCG
TGAGCGGGGTCTCGAGTGTCTGGGTCTTTGCTGTCTACTCGATAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260LRX |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR025977 |
| DBxref | InterPro:IPR011989 |
| DBxref | PFAM:PF12719 |
| Product | Nuclear condensing complex subunits C-term domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:990526..993923 - |
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