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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1067502..1068871- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_51835-T1 ID=CAN33_51835-T1|Name=CAN33_51835-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1370bp|location=Sequence derived from alignment at NKJJ01000020.1:1067502..1068871- (Aspergillus niger FDAARGOS_311)
ATGGCGGACGGAATTGACAGACGCGCTGATGGTAGGACCTCCAAAAGTCC
CCAACAGTTATTCAGGTCGGTATACTGACTGCGCAAAACTAGACCGCATG
GAGTTCAATACCTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACAT
GCACTTGAAGGAGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAAT
CTCCGTCTGCAGTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGC
GATACCATTGCTCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTC
GATTAGTATCCTCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGGTA
TGTAATATGCGCTCAATTGCATTTTGTTGGTGGTAATCTCACATCTGATA
GCCCTCGTCCTTTCCCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTT
ATTATGGCCCTCGGTGATTACATGAACGTTCAGTGCCATGCTTGTATTGG
AGGCACAAATATTGGAGAGGATATCAGGAAGCTTGACTACGGCCAGCATG
TCGTTTCGGGCACACCGGGCAGAGTCGCCGATATGATTCGCAGACGTCAT
CTGCGCACCCGTCACATCAAGATGCTGGTTCTTGATGAAGCCGATGAACT
ACTCAACCGTGGATTCCGTGAACAGATTTACGATGTCTACCGCTACCTTC
CTCCTGCCACGCAAGTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTG
CTTGACATGACCACCAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAA
GCGTGACGAGTTGACCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGG
AGAAGGAAGAGTGGAAGTTCGATACCCTTTGCGACCTTTACGATACCTTG
ACTATCACCCAGGCGGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTG
GCTTACCGACAAGATGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACG
GTGAAATGCCCCAGAAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAG
GGTAATTCCCGTGTGCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGA
TGTGCAGCAGGTGTCCCTCGTCATCAACTACGATCTGCCCACTAACCGTG
AAAACTACATCCACCGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGT
GTTGCCATCAACTTCGTCACCAGCGATGACGTGCGCATCCTCCGCGACAT
TGAACTCTACTACTCCACTCAGATTGATGAGATGCCCATGAATGGTATGT
TGACACCATCTATATCACCAAGACCGGATATAACTAACCCATTTTTCCAG
TTGCCGATCTTCTGTCATAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1067502..1068871- >CAN33_51835-T1 ID=CAN33_51835-T1|Name=CAN33_51835-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4812bp|location=Sequence derived from alignment at NKJJ01000020.1:1067502..1068871- (Aspergillus niger FDAARGOS_311)
TTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCACTCGTGAACTTGC
CACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGAACGTTC
AGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATCAGGAAG
CTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGTCGCCGA
TATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGCTGGTTC
TTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAGATTTAC
GATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGTTTCCGC
TACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGACAGACC
CCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGCATCAAG
CAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATACCCTTTG
CGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCTGCAACA
CCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCCAACTTT
ACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGACAGCAT
TATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCACTGATG
TCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATCAACTAC
GATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCGTAGTGG
TCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCGATGACG
TGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATTGATGAG
ATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGTCACTGT
TGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCCGTGGTA
TCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGTGCCATT
GTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATCCGGTAC
TGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCGATACCG
TCGTCCGCGAATCTCAGGGTATATGGCGGACGGAATTGACAGACGCGCTG
ATGTTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCACTCGTGAACT
TGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGAACG
TTCAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATCAGG
AAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGTCGC
CGATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGCTGG
TTCTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAGATT
TACGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGTTTC
CGCTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGACAG
ACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGCATC
AAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATACCCT
TTGCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCTGCA
ACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCCAAC
TTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGACAG
CATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCACTG
ATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATCAAC
TACGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCGTAG
TGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCGATG
ACGTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATTGAT
GAGATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGTCAC
TGTTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCCGTG
GTATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGTGCC
ATTGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATCCGG
TACTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCGATA
CCGTCGTCCGCGAATCTCAGGGTATATGGCGGACGGAATTGACAGACGCG
CTGATGTTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCACTCGTGA
ACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACATGA
ACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGATATC
AGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAGAGT
CGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGATGC
TGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAACAG
ATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGTCGT
TTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCATGA
CAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAAGGC
ATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGATAC
CCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCTTCT
GCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAAGCC
AACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCGTGA
CAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCTCCA
CTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTCATC
AACTACGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGGTCG
TAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCAGCG
ATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAGATT
GATGAGATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGAGGT
CACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTCTCC
GTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCCCGT
GCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCAATC
CGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCATCG
ATACCGTCGTCCGCGAATCTCAGGGTATATGGCGGACGGAATTGACAGAC
GCGCTGATGTTGCCGATCTTCTGTCATAACCCTCGTCCTTTCCCCACTCG
TGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGGTGATTACA
TGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTGGAGAGGAT
ATCAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACACCGGGCAG
AGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCACATCAAGA
TGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGATTCCGTGAA
CAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAAGTCGTTGT
CGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCACCAAGTTCA
TGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGACCCTCGAA
GGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGGAAGTTCGA
TACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGCGGTCATCT
TCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGATGCGCGAA
GCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAGAAGGAGCG
TGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGTGCTTATCT
CCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGTCCCTCGTC
ATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCACCGTATCGG
TCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTTCGTCACCA
GCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACTCCACTCAG
ATTGATGAGATGCCCATGAATGACCGCATGGAGTTCAATACCTCGAAGGA
GGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGGAGAGCCTTC
TCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCAGTCCAGTCC
CGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGCTCAGGCGCA
ATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCCTCCAGGTCA
TCGATACCGTCGTCCGCGAATCTCAGGGTATATGGCGGACGGAATTGACA
GACGCGCTGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | RNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1067502..1068871 - |
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