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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:847434..848738+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_5185-T1 ID=CAN33_5185-T1|Name=CAN33_5185-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1305bp|location=Sequence derived from alignment at NKJJ01000019.1:847434..848738+ (Aspergillus niger FDAARGOS_311)
ATGATTGACCCCCTCAGTTTGCTGGTCCTTTTTGGTGTAGCTGGCAGCAG
CCAGCTCGCTTACGCATCGCCCGTGACGCAGAAAGCTGAGGCTACAAGGG
CAACTTCATACTCCTACAGTTCTTTTACCTACACGCAGGTCACTTCAACT
CGCTATGCTACTTCACTGAGTGCACCGCTGTCTTTTGCTACCCCATTCGC
TCCAGCATTTAGCAAGGCGTCAACTCTGCTTCCCAGTAACGTGACCTATA
CAACATACTCCTTGCAGCCAAGCCAGACTCTCTCCCCAGACGGAGAATAT
GGCCAGAGTGCGTATGCTGCGTTGTGGGCCAACCTGTCGTATACTTCTGC
GCCTCCAATCACAACTACCGTCTCCCCTACACCAGTACCCTCTAGCGAGC
TGGTATACCCTCCAACTCTGTACAACAGAATTGATTATGCAGACCTGAAG
CTCCCATCTGATTTTATTTGGGGCGTCGCAGCCAGCGCATGGCAGATCGA
AGGAGGCCTCAAGCTCGAAGGCCGCGGCACATCTATCCTCGACACCATCG
GCGCTATCCAGAGTGACGACAACTCCTCAGATGCCAACATCGCCGACCTA
AGCTACTATATGTACAAACAGGACATTGCGCGACTAGCCGCCATAGGCAT
CCCATACCTCTCCTTCAGCATCTCCTGGCCACGCATCGTCCCTTTCGGCG
TAGCCAACTCACCCGTCAACACCGAGGGACTCCAGCACTACGACGATGTG
ATTAACACCTGTCTTCAATACGGCATCACCCCTATCGTAACCCTAAACCA
CGTCGACTTCCCGACAGCCCAAGCAGCCGACTACTCCACCCTCACGGACA
ACTTCCTCTACTATGCGAAGCAAGTAATGACCCGCTACGCAGACCGGGTC
CCCTACTGGGTGACCTTCAACGAGCCCAACATTGGCATCGGCAACAGCTT
CACCTCCTACAACGACCTCACGCACGTCCTAACCGCACACGCGGCCGTCT
ACCACTGGTACAAAGAGGAACTGCAAGGCACGGGCCAAATTACCATGAAG
TTCGCCAACAATCTCGGCGTTCCCCTGGATCCCTCCAACAGCAGCCACGT
CGACGCCGCCCTCCGATACCAAGACTTCATCCTGGGAATTATGGCCAACC
CATTATTCCTCGGCGAACAATACCCCTCGACTGTCCTCAACACGCCTAAC
CTTAACCTCACCCCACTCACCCAAACCCAACTCTCTACTATCAACAACAC
CGTCGACTTCTGGGCCTTCGACCCCTACGTCGCGCAATTCGCCCTCCCCC
TCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:847434..848738+ >CAN33_5185-T1 ID=CAN33_5185-T1|Name=CAN33_5185-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1305bp|location=Sequence derived from alignment at NKJJ01000019.1:847434..848738+ (Aspergillus niger FDAARGOS_311)
ATGATTGACCCCCTCAGTTTGCTGGTCCTTTTTGGTGTAGCTGGCAGCAG
CCAGCTCGCTTACGCATCGCCCGTGACGCAGAAAGCTGAGGCTACAAGGG
CAACTTCATACTCCTACAGTTCTTTTACCTACACGCAGGTCACTTCAACT
CGCTATGCTACTTCACTGAGTGCACCGCTGTCTTTTGCTACCCCATTCGC
TCCAGCATTTAGCAAGGCGTCAACTCTGCTTCCCAGTAACGTGACCTATA
CAACATACTCCTTGCAGCCAAGCCAGACTCTCTCCCCAGACGGAGAATAT
GGCCAGAGTGCGTATGCTGCGTTGTGGGCCAACCTGTCGTATACTTCTGC
GCCTCCAATCACAACTACCGTCTCCCCTACACCAGTACCCTCTAGCGAGC
TGGTATACCCTCCAACTCTGTACAACAGAATTGATTATGCAGACCTGAAG
CTCCCATCTGATTTTATTTGGGGCGTCGCAGCCAGCGCATGGCAGATCGA
AGGAGGCCTCAAGCTCGAAGGCCGCGGCACATCTATCCTCGACACCATCG
GCGCTATCCAGAGTGACGACAACTCCTCAGATGCCAACATCGCCGACCTA
AGCTACTATATGTACAAACAGGACATTGCGCGACTAGCCGCCATAGGCAT
CCCATACCTCTCCTTCAGCATCTCCTGGCCACGCATCGTCCCTTTCGGCG
TAGCCAACTCACCCGTCAACACCGAGGGACTCCAGCACTACGACGATGTG
ATTAACACCTGTCTTCAATACGGCATCACCCCTATCGTAACCCTAAACCA
CGTCGACTTCCCGACAGCCCAAGCAGCCGACTACTCCACCCTCACGGACA
ACTTCCTCTACTATGCGAAGCAAGTAATGACCCGCTACGCAGACCGGGTC
CCCTACTGGGTGACCTTCAACGAGCCCAACATTGGCATCGGCAACAGCTT
CACCTCCTACAACGACCTCACGCACGTCCTAACCGCACACGCGGCCGTCT
ACCACTGGTACAAAGAGGAACTGCAAGGCACGGGCCAAATTACCATGAAG
TTCGCCAACAATCTCGGCGTTCCCCTGGATCCCTCCAACAGCAGCCACGT
CGACGCCGCCCTCCGATACCAAGACTTCATCCTGGGAATTATGGCCAACC
CATTATTCCTCGGCGAACAATACCCCTCGACTGTCCTCAACACGCCTAAC
CTTAACCTCACCCCACTCACCCAAACCCAACTCTCTACTATCAACAACAC
CGTCGACTTCTGGGCCTTCGACCCCTACGTCGCGCAATTCGCCCTCCCCC
TCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-22) |
| Note | CAZy:GH1 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001360 |
| DBxref | PFAM:PF00232 |
| Product | Glycosyl hydrolase family 1 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:847434..848738 + |
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