You are here

Home

CAN33_5190-T1, CAN33_5190-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5190-T1
Unique NameCAN33_5190-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:848804..849232+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5190-T1 ID=CAN33_5190-T1|Name=CAN33_5190-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=429bp|location=Sequence derived from alignment at NKJJ01000019.1:848804..849232+ (Aspergillus niger FDAARGOS_311)
ATGATCCAATCCGACGGATGGCTGATGGGCGACATGTCTAATGCATATTC
CTCCATCGCGCCACAGTACGTCCGCCAGCAACTAGGGTATGTCTGGAACA
CATTCAGGCCGTCAGGGATAGTGATCGCAGAGTTTGGATTCAACCCATTC
GACGAATCGTTAAAGGAGGGCAACGCCCAGCGATATGATTTGGAACGTAC
GCTATATTACCAGGACTTCCTGGAGGAGATGCTGAAGGCGATTCATGAGG
ACGGAGTGAACGTGATTGGAACGCTGGCGTGGAGTTATCTGGATAACAAT
GAGTTCGGGAGCTATGGGAACCAGTATGGAATGCAGAGTGTGAATCGCAC
GGATGGGACGTGGGAGAGGAGGTATAAGAGGAGTATTTTCGATTATGTGG
ATTTTTTCCACGAGCATGTTAGCAGTTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:848804..849232+

>CAN33_5190-T1 ID=CAN33_5190-T1|Name=CAN33_5190-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=429bp|location=Sequence derived from alignment at NKJJ01000019.1:848804..849232+ (Aspergillus niger FDAARGOS_311)
ATGATCCAATCCGACGGATGGCTGATGGGCGACATGTCTAATGCATATTC
CTCCATCGCGCCACAGTACGTCCGCCAGCAACTAGGGTATGTCTGGAACA
CATTCAGGCCGTCAGGGATAGTGATCGCAGAGTTTGGATTCAACCCATTC
GACGAATCGTTAAAGGAGGGCAACGCCCAGCGATATGATTTGGAACGTAC
GCTATATTACCAGGACTTCCTGGAGGAGATGCTGAAGGCGATTCATGAGG
ACGGAGTGAACGTGATTGGAACGCTGGCGTGGAGTTATCTGGATAACAAT
GAGTTCGGGAGCTATGGGAACCAGTATGGAATGCAGAGTGTGAATCGCAC
GGATGGGACGTGGGAGAGGAGGTATAAGAGGAGTATTTTCGATTATGTGG
ATTTTTTCCACGAGCATGTTAGCAGTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_5190CAN33_5190Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5190-T1.exon1CAN33_5190-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5190-T1.cdsCAN33_5190-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5190-T1CAN33_5190-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001360
ProductGlycosyl hydrolase family 1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:848804..849232 +
Powered by Drupal