|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1313395..1315485+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_52140-T1 ID=CAN33_52140-T1|Name=CAN33_52140-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2091bp|location=Sequence derived from alignment at NKJJ01000020.1:1313395..1315485+ (Aspergillus niger FDAARGOS_311)
ATGGCCGAAACCGAGTCCCCACCTGGCCCCAAAGACAAACTAGAGGTTGC
CTTGTTCCTTGCCGCTAGCAAAGGGTATGATACCATTGTCACGCTTCTGT
TAGGCACCCCTGGCGTGACTCTGGACTGCAAGGATGAACTAGGTCGGACG
CCATTCTTCTGGGCCGCCGCCGAGGGCCACGACAAGGTCCTCCAATTGCT
CCTTGGAACCGGTGCTGTGGACCCAAACATCAAAGACGCTAAGCGTGGAC
AGTCGGCAATTTGTGCAGCTGCGGAGGGCGGCCATGAGAGCGTTGTTGCC
CGGTTGCTTGGTGTCGGAGTGGATTGCCATGCTGCGGACTCTCAAGGGAA
GACACCGTTGGCATATGCGGTCGAAAAAGAGAGTGTATCGATCCTGAATA
TACTGCTAAAAGCGGGGGCAGATCCAAATGTGATAGATGAGGGCGGCCTG
ATCCCATTATCGACTGCGGTAGAGAAAGGCAATCCTGATATTGTGGAAAT
GCTTTTGAAGTCCGGGGCTGATCCCAATGCTGTGGCTTCGAATGGGTGTC
CGCCACTATTGTCGGCGGTGCAGGCTGATAATGAAGTCATCGTGCAGTTG
CTTCTGGAAGCGAAAGCGGATCCTAATCTTAAAGACTCGGAAGGGAATGC
GCCACTATTGTGCGCTGTCGAAGCAGGAAATGAAACCATGGTGCAGTTGC
TGCTGAAGGCAGAAGCAGACCCCAATGTGAAGGATGCAGAAGGAAAAGCA
CCGTTGTCATACGCTGTAGAAGTGGGTAACGAAATCATTGTGCAGATGCT
GCTGAAGGCGAAAGCAGATCCCGACGTCAAGAATCCAGAAGGAAGAGCGC
CGTTGTCATGCGCTGTGGAAGGGGGGGACGAGATCATGGTGCAGATGCTG
CTCAGGGCTAACGCTGACCCTGATGTGAAGGACGGGGACGGGAGGCCACC
GTTGCTATGGGCGGTTGACAAAGGATCCGAGGAGGTAGTGCGATTATTGA
TTGCGTCTCGAAGGGTGGACCTCAATGCAGTCGATGATGGTGGCCGTTCT
GCACTGTGGTGGGCTGCAATGTCTGGGCAATTGAATATCGTCCGGCTGCT
AGTTCGGTACGGAGCAGATATGGAGATGCAGCCTTCCTCAGGAGAGAAGT
ACGAGCAATGTGGCACGCCCTTGTACCAGGCTGGCCGTCGGGGCCACTTC
GATGTGGTCAAGTATCTGATAAAGAAGGGGGCAAATATCAATGCTCCGGC
TGGAGAACCAGGTCTGTCGCTACTGATATCGCTGGTGCTCTTTGACCGAA
CTAAGAGGGGCAGACGAATGCTTGAGCTTCTGCTCGATAGAGGCGCGGAC
ATCAACTCACAAGACGGGTCCGGGAAGACAATCCTGGATCTTGCAGCGGC
AGCCGGCGACGTCGAGCTGGCCGAACTCGCATTAGAGCATGGAATTATGT
TAGAAGCCACCGCGAAGGATGGCATGACGGCCCTGCATCGCGCAGTACTA
CATCAGCACGATATCATCATGGACATGCTCCTGGACGCTGGCGCCGATGC
TGAAGCACAGGATGGTAACGGGGACACACCATTGCACTTTGCGGCAGCCA
GTGGCCGAAGGGGACTCTTTGAACTATTTCTAGAGAAATCCCCCGACATC
AATATTACTAACTTCTCGGGTGAAACTCCGCTGCACAAGGCAGTGCAACG
GGGTCGGCGAAAGATGGTTGAGTATATGCTGCAAAATGGAGCCGACGTCA
GCATGCGCGATGACTATCAAAGGACGCCGCTACATAAGGCCGTAGGGTCC
GAGAATAACGTTATGAGATTATTAGTCAATCGGGGGGCGGATGTTCATGC
GAGAGACATGTTCGGCCAGACTGCCCTTCATATGGCAGCAGAGGCCGGGC
TAGCGGAGGATGTTTACTTCCTATTGGGTCATGGAGCAGCCGGAGATTTA
CCAGATGATCGTGGTCGAACGGCACGGGACTTGGCTGTCAAGGCGAAGAA
GAAGAGTGTCATAAGAATCTTTGAACGGATGGAACTAATGGTTGCCAAAG
ATGAGGAAGAATCATCCTCCGATGTTTCGTCTGATGAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1313395..1315485+ >CAN33_52140-T1 ID=CAN33_52140-T1|Name=CAN33_52140-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2091bp|location=Sequence derived from alignment at NKJJ01000020.1:1313395..1315485+ (Aspergillus niger FDAARGOS_311)
ATGGCCGAAACCGAGTCCCCACCTGGCCCCAAAGACAAACTAGAGGTTGC
CTTGTTCCTTGCCGCTAGCAAAGGGTATGATACCATTGTCACGCTTCTGT
TAGGCACCCCTGGCGTGACTCTGGACTGCAAGGATGAACTAGGTCGGACG
CCATTCTTCTGGGCCGCCGCCGAGGGCCACGACAAGGTCCTCCAATTGCT
CCTTGGAACCGGTGCTGTGGACCCAAACATCAAAGACGCTAAGCGTGGAC
AGTCGGCAATTTGTGCAGCTGCGGAGGGCGGCCATGAGAGCGTTGTTGCC
CGGTTGCTTGGTGTCGGAGTGGATTGCCATGCTGCGGACTCTCAAGGGAA
GACACCGTTGGCATATGCGGTCGAAAAAGAGAGTGTATCGATCCTGAATA
TACTGCTAAAAGCGGGGGCAGATCCAAATGTGATAGATGAGGGCGGCCTG
ATCCCATTATCGACTGCGGTAGAGAAAGGCAATCCTGATATTGTGGAAAT
GCTTTTGAAGTCCGGGGCTGATCCCAATGCTGTGGCTTCGAATGGGTGTC
CGCCACTATTGTCGGCGGTGCAGGCTGATAATGAAGTCATCGTGCAGTTG
CTTCTGGAAGCGAAAGCGGATCCTAATCTTAAAGACTCGGAAGGGAATGC
GCCACTATTGTGCGCTGTCGAAGCAGGAAATGAAACCATGGTGCAGTTGC
TGCTGAAGGCAGAAGCAGACCCCAATGTGAAGGATGCAGAAGGAAAAGCA
CCGTTGTCATACGCTGTAGAAGTGGGTAACGAAATCATTGTGCAGATGCT
GCTGAAGGCGAAAGCAGATCCCGACGTCAAGAATCCAGAAGGAAGAGCGC
CGTTGTCATGCGCTGTGGAAGGGGGGGACGAGATCATGGTGCAGATGCTG
CTCAGGGCTAACGCTGACCCTGATGTGAAGGACGGGGACGGGAGGCCACC
GTTGCTATGGGCGGTTGACAAAGGATCCGAGGAGGTAGTGCGATTATTGA
TTGCGTCTCGAAGGGTGGACCTCAATGCAGTCGATGATGGTGGCCGTTCT
GCACTGTGGTGGGCTGCAATGTCTGGGCAATTGAATATCGTCCGGCTGCT
AGTTCGGTACGGAGCAGATATGGAGATGCAGCCTTCCTCAGGAGAGAAGT
ACGAGCAATGTGGCACGCCCTTGTACCAGGCTGGCCGTCGGGGCCACTTC
GATGTGGTCAAGTATCTGATAAAGAAGGGGGCAAATATCAATGCTCCGGC
TGGAGAACCAGGTCTGTCGCTACTGATATCGCTGGTGCTCTTTGACCGAA
CTAAGAGGGGCAGACGAATGCTTGAGCTTCTGCTCGATAGAGGCGCGGAC
ATCAACTCACAAGACGGGTCCGGGAAGACAATCCTGGATCTTGCAGCGGC
AGCCGGCGACGTCGAGCTGGCCGAACTCGCATTAGAGCATGGAATTATGT
TAGAAGCCACCGCGAAGGATGGCATGACGGCCCTGCATCGCGCAGTACTA
CATCAGCACGATATCATCATGGACATGCTCCTGGACGCTGGCGCCGATGC
TGAAGCACAGGATGGTAACGGGGACACACCATTGCACTTTGCGGCAGCCA
GTGGCCGAAGGGGACTCTTTGAACTATTTCTAGAGAAATCCCCCGACATC
AATATTACTAACTTCTCGGGTGAAACTCCGCTGCACAAGGCAGTGCAACG
GGGTCGGCGAAAGATGGTTGAGTATATGCTGCAAAATGGAGCCGACGTCA
GCATGCGCGATGACTATCAAAGGACGCCGCTACATAAGGCCGTAGGGTCC
GAGAATAACGTTATGAGATTATTAGTCAATCGGGGGGCGGATGTTCATGC
GAGAGACATGTTCGGCCAGACTGCCCTTCATATGGCAGCAGAGGCCGGGC
TAGCGGAGGATGTTTACTTCCTATTGGGTCATGGAGCAGCCGGAGATTTA
CCAGATGATCGTGGTCGAACGGCACGGGACTTGGCTGTCAAGGCGAAGAA
GAAGAGTGTCATAAGAATCTTTGAACGGATGGAACTAATGGTTGCCAAAG
ATGAGGAAGAATCATCCTCCGATGTTTCGTCTGATGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000201.3 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | Ankyrin repeats (3 copies) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1313395..1315485 + |
|
