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CAN33_52390-T1, CAN33_52390-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52390-T1
Unique NameCAN33_52390-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1462017..1464362-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52390-T1 ID=CAN33_52390-T1|Name=CAN33_52390-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2346bp|location=Sequence derived from alignment at NKJJ01000020.1:1462017..1464362- (Aspergillus niger FDAARGOS_311)
ATGGTCACAGGAAATGGAGACTTTCGATATCCGCCCCTTGCAGGCGCGCA
TGATATCCCCAGCCGACGCAGGATCCCGAACCCTCCCCGCCTAGATCCGT
TGAGACTCAATCCTCCCTTTCCACGCCCCTCGACCGCCGACGGCGTTCGC
CCTCCCCCTTCTCAGCGCCCTCCCGTGCCTTCCCCGCGACTGCACCCTGC
AAAGGCGGCTGCTGCTGATCCATCATGGCGCTCCCCATCGCCTCAACCCA
AAGATGACGACTATTTCGTCCCCCGCACGCCCGCCCTCCGTACGCCAACA
TACCCGGTGTCACCCAATCCTCGGCCGGGATATCCTCCCAGAGAGATTGA
ATTCGATCGCCCACCGCCCCGGAAGCTTCCGCCAGGCGCACCAGGGTTGC
GCATTTCCATGTCTACCTCCAAATTGCACAGTCGACGCCAGCGACCTCCT
CGGTCACGAGAACGGTATCCAGATGATGCGTATGGGTTGGCATTGCCTCG
CGTCGTGCCTCCGGGGAGCTATGCAGACACACATGGAGAGGATGCACTGC
GATCTAGTGTTAACTCGGCCATGACGTCGCGATCCAGCATCGAGCAAGCC
AGCGGAACTGAGCGCAGTAGTGTTCTCACAAAGAGTAGCTCGATTACCGA
CTTGTCTCCTGACACGCCCGATGGACCATGCGAAAAAGATGGGGGCATGA
GTGTGGAGGATGCCATTTCCATGTACCTCGACGGATTCAGCGATGTCACG
GAAGAACCTGGATCACCAGATATATACGACGATGAAAAAGTAAGGCCATG
GAGTCCATGTCCGCCCACAGAATATACGCTCGATGATGGCCATACTTCCG
ATGAGCATTCGCCCGATCTGGATCCCACTGAGGATCTTCCGCCTGTACCA
CCGCTCCCTGAGCTGAGTGCCCCTGTACGAGGGCCACTAAGCGATCGCCA
TGAGGCCGAGGAAGTCCCACATGAAGAGCCAACCGTTGAAGCACCATTAA
AATCACCCAGTGTCGAACGTCAAGAAAGAAAGGTCGTGCTGCCCGGAGTG
GTGCCTCCGCCCCTGCTTTTGGGAACGGACTCGCGCGATCGCTACGGGTT
CCGAAAGGCTACCCATCATGTGACCCTGGCCCAGTACGAGGCGTGGAGCA
GCTCATACTCCGACTTTGCCGCGAACCAGCGAATCAAGTGGGTGGAACTG
CTCCGCCAGAATCGGCTGCCGATCACAGATCCGATCTCCTTCCCGCCAAA
GTCAAACAAAGTCAAAAAGTTTGTGCGCAAGGGTATTCCGTCGGAGTATC
GAGGAGCCGCCTGGTTCTTCTACGCTGGCGGCTATGAGCACCTGAACCGG
AATCCTGGGCTCTACGAGCAGCTTGTCCGGCAGGCCATGGATTCCCCGAG
CAACGACGACAAGGAACACATTGAACGCGATTTACATCGAACGTTTCCGG
ATAACATCCACTTTAAACCCGAATCGGTCGAACAATACGGAGGCTCCAGC
GCTGGCGCTGGAAGCAGCAACCCGAAACATGAGTCCGTCACGGTTGAGAC
AGAGATGATCCAGTCGCTCCGCCGCGTGCTATATGCATTCGCAGTGCACA
ACCCCCAGATCGGGTATACGCAGTCGCTGAACTTTATCACGGGACTGCTG
CTCCTGTTCATGCCGGAAGAAAAGGCGTTCTGGATGCTGCACATCATCAG
CTCGGTGTATCTCCCCAGCACGCACGAGATCAGCCTGGAGGGCGCTAATA
TCGACCTGTGGATTCTCATGGTGCTGCTCAAGGAGACGTCGCCGCATGTA
TACAACAAGATCGCTGGCGGGCTCGGTGGCGGCTCGCGGGCGCCCGCACT
GACGGTGACGTCGCGGCTGCCGGACATCACGTTGGGGCTGACGAACTGGC
TGATGTCGGTGTTCATCGGGACGTTGCCCCTGGAGACGACACTGCGGGTG
TGGGATGTATTCTTCTATGAAGGATCCAAGACGTTCTTCCGCGTGTCACT
GGCTATCTTCAAGTCGTGCGAGCGAGAGATCATGGCGGTGTCAGATCCAA
TGGAGGTGTTTCAGGTGGTGCAGACAGTGCCGAAGAAGCTGCTGGACGCC
AATACTCTGATGGACGACTGTTTCGTGCGACGACACCGGGTTGGACAAGG
CCGCATCGACGAGCTGCGCGCGGCGCGACGGGCAGCAGTTCGACACGAGA
ACATGCGGCGATCGCGGGCGTGGAACAAAGGCCAGATCCAGGCAGCGACG
GACGAGTGGCCAGGACGATCGCGAACACCCATCCCAGGCATCGAGCGCAA
GATAGGGGATTCGTGGCGACACATGCGGAACCATGCATTTCGGTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1462017..1464362-

>CAN33_52390-T1 ID=CAN33_52390-T1|Name=CAN33_52390-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2346bp|location=Sequence derived from alignment at NKJJ01000020.1:1462017..1464362- (Aspergillus niger FDAARGOS_311)
ATGGTCACAGGAAATGGAGACTTTCGATATCCGCCCCTTGCAGGCGCGCA
TGATATCCCCAGCCGACGCAGGATCCCGAACCCTCCCCGCCTAGATCCGT
TGAGACTCAATCCTCCCTTTCCACGCCCCTCGACCGCCGACGGCGTTCGC
CCTCCCCCTTCTCAGCGCCCTCCCGTGCCTTCCCCGCGACTGCACCCTGC
AAAGGCGGCTGCTGCTGATCCATCATGGCGCTCCCCATCGCCTCAACCCA
AAGATGACGACTATTTCGTCCCCCGCACGCCCGCCCTCCGTACGCCAACA
TACCCGGTGTCACCCAATCCTCGGCCGGGATATCCTCCCAGAGAGATTGA
ATTCGATCGCCCACCGCCCCGGAAGCTTCCGCCAGGCGCACCAGGGTTGC
GCATTTCCATGTCTACCTCCAAATTGCACAGTCGACGCCAGCGACCTCCT
CGGTCACGAGAACGGTATCCAGATGATGCGTATGGGTTGGCATTGCCTCG
CGTCGTGCCTCCGGGGAGCTATGCAGACACACATGGAGAGGATGCACTGC
GATCTAGTGTTAACTCGGCCATGACGTCGCGATCCAGCATCGAGCAAGCC
AGCGGAACTGAGCGCAGTAGTGTTCTCACAAAGAGTAGCTCGATTACCGA
CTTGTCTCCTGACACGCCCGATGGACCATGCGAAAAAGATGGGGGCATGA
GTGTGGAGGATGCCATTTCCATGTACCTCGACGGATTCAGCGATGTCACG
GAAGAACCTGGATCACCAGATATATACGACGATGAAAAAGTAAGGCCATG
GAGTCCATGTCCGCCCACAGAATATACGCTCGATGATGGCCATACTTCCG
ATGAGCATTCGCCCGATCTGGATCCCACTGAGGATCTTCCGCCTGTACCA
CCGCTCCCTGAGCTGAGTGCCCCTGTACGAGGGCCACTAAGCGATCGCCA
TGAGGCCGAGGAAGTCCCACATGAAGAGCCAACCGTTGAAGCACCATTAA
AATCACCCAGTGTCGAACGTCAAGAAAGAAAGGTCGTGCTGCCCGGAGTG
GTGCCTCCGCCCCTGCTTTTGGGAACGGACTCGCGCGATCGCTACGGGTT
CCGAAAGGCTACCCATCATGTGACCCTGGCCCAGTACGAGGCGTGGAGCA
GCTCATACTCCGACTTTGCCGCGAACCAGCGAATCAAGTGGGTGGAACTG
CTCCGCCAGAATCGGCTGCCGATCACAGATCCGATCTCCTTCCCGCCAAA
GTCAAACAAAGTCAAAAAGTTTGTGCGCAAGGGTATTCCGTCGGAGTATC
GAGGAGCCGCCTGGTTCTTCTACGCTGGCGGCTATGAGCACCTGAACCGG
AATCCTGGGCTCTACGAGCAGCTTGTCCGGCAGGCCATGGATTCCCCGAG
CAACGACGACAAGGAACACATTGAACGCGATTTACATCGAACGTTTCCGG
ATAACATCCACTTTAAACCCGAATCGGTCGAACAATACGGAGGCTCCAGC
GCTGGCGCTGGAAGCAGCAACCCGAAACATGAGTCCGTCACGGTTGAGAC
AGAGATGATCCAGTCGCTCCGCCGCGTGCTATATGCATTCGCAGTGCACA
ACCCCCAGATCGGGTATACGCAGTCGCTGAACTTTATCACGGGACTGCTG
CTCCTGTTCATGCCGGAAGAAAAGGCGTTCTGGATGCTGCACATCATCAG
CTCGGTGTATCTCCCCAGCACGCACGAGATCAGCCTGGAGGGCGCTAATA
TCGACCTGTGGATTCTCATGGTGCTGCTCAAGGAGACGTCGCCGCATGTA
TACAACAAGATCGCTGGCGGGCTCGGTGGCGGCTCGCGGGCGCCCGCACT
GACGGTGACGTCGCGGCTGCCGGACATCACGTTGGGGCTGACGAACTGGC
TGATGTCGGTGTTCATCGGGACGTTGCCCCTGGAGACGACACTGCGGGTG
TGGGATGTATTCTTCTATGAAGGATCCAAGACGTTCTTCCGCGTGTCACT
GGCTATCTTCAAGTCGTGCGAGCGAGAGATCATGGCGGTGTCAGATCCAA
TGGAGGTGTTTCAGGTGGTGCAGACAGTGCCGAAGAAGCTGCTGGACGCC
AATACTCTGATGGACGACTGTTTCGTGCGACGACACCGGGTTGGACAAGG
CCGCATCGACGAGCTGCGCGCGGCGCGACGGGCAGCAGTTCGACACGAGA
ACATGCGGCGATCGCGGGCGTGGAACAAAGGCCAGATCCAGGCAGCGACG
GACGAGTGGCCAGGACGATCGCGAACACCCATCCCAGGCATCGAGCGCAA
GATAGGGGATTCGTGGCGACACATGCGGAACCATGCATTTCGGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52390CAN33_52390Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52390-T1.cdsCAN33_52390-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52390-T1.exon1CAN33_52390-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52390-T1CAN33_52390-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035969
DBxrefInterPro:IPR000195
DBxrefPFAM:PF00566
ProductRab-GTPase-TBC domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1462017..1464362 -
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