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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1470525..1471561- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_52405-T1 ID=CAN33_52405-T1|Name=CAN33_52405-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1037bp|location=Sequence derived from alignment at NKJJ01000020.1:1470525..1471561- (Aspergillus niger FDAARGOS_311)
ATGTTCGCTGTCTCTGGAATGGTACACATCTACCAGTGTTGGTATGTATT
CTCACACAAGTGCTATGCACCATGCAGTTCCTAACGATGATAACAGCCAA
TACAAGTCATGGAAAGTGACTGGACTCCTGCCCTGGTCTGCTCTTCTCTT
CACAGCTGGGTTCATAACGCGTACTATCGGCGCCTTTGGACAGTGGGGGA
ATGTGGGCATCTACATTGCAAGCACCGTTCTCTTGCTGGCTGCACCGTGA
GTGCTTGTTGATGCGAATTGACCATGAATGTCACTGACTAGCGTGCAGAC
CCGTCTATGAGGGCGCCAACTACTTCACTCTGGGCCGCATCCTTTACTAC
ATCCCATATCATTCGCCAATTCATCCTGGGCGCGTTTTCACCACTTTTGT
GGCGGTTGGTGTGGTGATTGAAGCTATCACCGGCAATGGGGCTGCGCTAG
TTGCCAATTCCGAGGCGACTGAAGGTAAAAGGAAGACGGGAGAGGGATTG
CTCAAAGCAGCTTTGATCTTGCAACTTGTGTTGATGGCAGCATTTGTGGC
CTTGGCTGCCAGATTCCACTACAACTGTTCTCGTGGCGGCGTCTTGAACC
ACAAGATCAAGCGGGCCTTGTACGTGCTGTATTGCAGTTGTACCCTCATC
ACTGTGCGCACGATCTATCGAACAGTGGAATATTTTAGCGCTGCGAGCCT
CAATGTCTATAGTGGCAACCAGATCAGCCCGATCCTCAAGGATGAGTGGT
TTTTCTGGGTTTTTGAGGCTGGTGTCATGTACCTCAACACCATCTTGCTG
AATGTCTGCCATCCGATGCAATGGCTTCCACGCTCCAACAAGATATATCT
CGCCACGGATGGCGTTACCGAAATCGAAGGGCCTGGTTACGACGATCACC
GACCAGTCATCCTGACCCTTATTGATCCCTTCGACATAGTTGGCCTGATC
AAGAACAAAGGTAGACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGGCAA
ACTTAACAAGGATACGCCTGGATCGTTTGCCGTGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1470525..1471561- >CAN33_52405-T1 ID=CAN33_52405-T1|Name=CAN33_52405-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2790bp|location=Sequence derived from alignment at NKJJ01000020.1:1470525..1471561- (Aspergillus niger FDAARGOS_311)
ACCCGTCTATGAGGGCGCCAACTACTTCACTCTGGGCCGCATCCTTTACT
ACATCCCATATCATTCGCCAATTCATCCTGGGCGCGTTTTCACCACTTTT
GTGGCGGTTGGTGTGGTGATTGAAGCTATCACCGGCAATGGGGCTGCGCT
AGTTGCCAATTCCGAGGCGACTGAAGGTAAAAGGAAGACGGGAGAGGGAT
TGCTCAAAGCAGCTTTGATCTTGCAACTTGTGTTGATGGCAGCATTTGTG
GCCTTGGCTGCCAGATTCCACTACAACTGTTCTCGTGGCGGCGTCTTGAA
CCACAAGATCAAGCGGGCCTTGTACGTGCTGTATTGCAGTTGTACCCTCA
TCACTGTGCGCACGATCTATCGAACAGTGGAATATTTTAGCGCTGCGAGC
CTCAATGTCTATAGTGGCAACCAGATCAGCCCGATCCTCAAGGATGAGTG
GTTTTTCTGGGTTTTTGAGGCTGGTGTCATGTACCTCAACACCATCTTGC
TGAATGTCTGCCATCCGATGCAATGGCTTCCACGCTCCAACAAGATATAT
CTCGCCACGGATGGCGTTACCGAAATCGAAGGGCCTGGTTACGACGATCA
CCGACCAGTCATCCTGACCCTTATTGATCCCTTCGACATAGTTGGCCTGA
TCAAGAACAAAGGTAGACAAGAGAAGTATTGGGAAGCCGGGCCAGTCGGC
AAACTTAACAAGGATACGCCTGGATCGTTTGCCGTGTAGCCAATACAAGT
CATGGAAAGTGACTGGACTCCTGCCCTGGTCTGCTCTTCTCTTCACAGCT
GGGTTCATAACGCGTACTATCGGCGCCTTTGGACAGTGGGGGAATGTGGG
CATCTACATTGCAAGCACCGTTCTCTTGCTGGCTGCACCATGTTCGCTGT
CTCTGGAATGGTACACATCTACCAGTGTTGACCCGTCTATGAGGGCGCCA
ACTACTTCACTCTGGGCCGCATCCTTTACTACATCCCATATCATTCGCCA
ATTCATCCTGGGCGCGTTTTCACCACTTTTGTGGCGGTTGGTGTGGTGAT
TGAAGCTATCACCGGCAATGGGGCTGCGCTAGTTGCCAATTCCGAGGCGA
CTGAAGGTAAAAGGAAGACGGGAGAGGGATTGCTCAAAGCAGCTTTGATC
TTGCAACTTGTGTTGATGGCAGCATTTGTGGCCTTGGCTGCCAGATTCCA
CTACAACTGTTCTCGTGGCGGCGTCTTGAACCACAAGATCAAGCGGGCCT
TGTACGTGCTGTATTGCAGTTGTACCCTCATCACTGTGCGCACGATCTAT
CGAACAGTGGAATATTTTAGCGCTGCGAGCCTCAATGTCTATAGTGGCAA
CCAGATCAGCCCGATCCTCAAGGATGAGTGGTTTTTCTGGGTTTTTGAGG
CTGGTGTCATGTACCTCAACACCATCTTGCTGAATGTCTGCCATCCGATG
CAATGGCTTCCACGCTCCAACAAGATATATCTCGCCACGGATGGCGTTAC
CGAAATCGAAGGGCCTGGTTACGACGATCACCGACCAGTCATCCTGACCC
TTATTGATCCCTTCGACATAGTTGGCCTGATCAAGAACAAAGGTAGACAA
GAGAAGTATTGGGAAGCCGGGCCAGTCGGCAAACTTAACAAGGATACGCC
TGGATCGTTTGCCGTGTAGCCAATACAAGTCATGGAAAGTGACTGGACTC
CTGCCCTGGTCTGCTCTTCTCTTCACAGCTGGGTTCATAACGCGTACTAT
CGGCGCCTTTGGACAGTGGGGGAATGTGGGCATCTACATTGCAAGCACCG
TTCTCTTGCTGGCTGCACCATGTTCGCTGTCTCTGGAATGGTACACATCT
ACCAGTGTTGACCCGTCTATGAGGGCGCCAACTACTTCACTCTGGGCCGC
ATCCTTTACTACATCCCATATCATTCGCCAATTCATCCTGGGCGCGTTTT
CACCACTTTTGTGGCGGTTGGTGTGGTGATTGAAGCTATCACCGGCAATG
GGGCTGCGCTAGTTGCCAATTCCGAGGCGACTGAAGGTAAAAGGAAGACG
GGAGAGGGATTGCTCAAAGCAGCTTTGATCTTGCAACTTGTGTTGATGGC
AGCATTTGTGGCCTTGGCTGCCAGATTCCACTACAACTGTTCTCGTGGCG
GCGTCTTGAACCACAAGATCAAGCGGGCCTTGTACGTGCTGTATTGCAGT
TGTACCCTCATCACTGTGCGCACGATCTATCGAACAGTGGAATATTTTAG
CGCTGCGAGCCTCAATGTCTATAGTGGCAACCAGATCAGCCCGATCCTCA
AGGATGAGTGGTTTTTCTGGGTTTTTGAGGCTGGTGTCATGTACCTCAAC
ACCATCTTGCTGAATGTCTGCCATCCGATGCAATGGCTTCCACGCTCCAA
CAAGATATATCTCGCCACGGATGGCGTTACCGAAATCGAAGGGCCTGGTT
ACGACGATCACCGACCAGTCATCCTGACCCTTATTGATCCCTTCGACATA
GTTGGCCTGATCAAGAACAAAGGTAGACAAGAGAAGTATTGGGAAGCCGG
GCCAGTCGGCAAACTTAACAAGGATACGCCTGGATCGTTTGCCGTGTAGC
CAATACAAGTCATGGAAAGTGACTGGACTCCTGCCCTGGTCTGCTCTTCT
CTTCACAGCTGGGTTCATAACGCGTACTATCGGCGCCTTTGGACAGTGGG
GGAATGTGGGCATCTACATTGCAAGCACCGTTCTCTTGCTGGCTGCACCA
TGTTCGCTGTCTCTGGAATGGTACACATCTACCAGTGTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1470525..1471561 - |
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