You are here

Home

CAN33_52630-T1, CAN33_52630-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52630-T1
Unique NameCAN33_52630-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1637985..1639652-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52630-T1 ID=CAN33_52630-T1|Name=CAN33_52630-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1668bp|location=Sequence derived from alignment at NKJJ01000020.1:1637985..1639652- (Aspergillus niger FDAARGOS_311)
ATGGCTGCTCGTGGTTGGCGATTCTGGCTGATTATTGCTGGACTGTCAAT
AACATCCCTCCTCACTGCGATCGAATGTACGGTTCCATCGACTGCTCTGC
CCACGATCTCGCGCGATTTGAACGCAGGAGAGTCGTATGTTTGGTTTGTC
AACGCACTCTTTCTATCAAGGTATTGACTCTCTCTCCTCCGCACGTCTTC
TTTCTTCCTGTAACGCTAAATCGTCCGCCATGGCCCTTTCAGTACCGCCG
TCCAGCCGCTCTTTGGACAATTGGCCGACGTCTTCGGTCGACGATGGCCC
CTGATCTCCGCAGTGGCTTTCTTTGCTCTAGGCAGTGGCATCAGCGGTGG
TGCCAGTTCGACCGCGATGCTTATTGCCGGGCGCACAATCCAGGGAGTGG
GCCTCGGAGGTGTCAACATGCTCATCGACGTGGTCGTCTGTGATCTCGTC
CCCTTACGCGAGCGAGGCCAAGTGACCGCCCTCATCTTCGTCGTGTTCGC
CGTGGGATCGTCCATCGGGCCCTTCATCGGGGGTGCCTTTACACAGCACG
TCACCTGGCGGTGGGCATTCTATATCAGTCTTCCAATCGCCGGCAGCGCG
ATGGTGTTCATGATCCTCTTCCTCCAGGTCAAATCTCAGAAGCACACCAC
CTTCGCGGACAAGATGAAACGCATTGACTGGCTAGGTAATACTATACTGG
TCGCCGCGGTGGTAGCAGTTCTCATCGCGCTCAGTTTCGGTGGCACCTCA
TACCCCTGGTCAAGCTGGCGTGTCATTGTGCCGTTAGTGCTGGGACTCAT
TGGACTGATCGCCTTCGCCCTGGTGCAGGTGACGCCCAAGCTCTGTCCAG
AGCCAACCATGCCCCCTCGTCTCTTCGCGAACCGCACCACCTTTGCCGCG
TTCGTTATCAGCTTTCTGCATGGGATGCTGATGTACTGGGAGCTATACTT
CCTGCCGGTATACTTCCAAGGAGTTCAGCTAAGCACGTCGACTCGATCCG
GAGTGGAATTGTTGCCCACTGTAATCGTCACTGTCCCTGCCGCCATCGTT
GCCGGTGCTCTTGTTACTAAGACCGGCCGGTACAAGCCCATACAAATCAG
TGGCTTCGCCTTCATGGCCCTCGGCATGGGCCTCTTCAGCCTTCTCGACC
AGAACTCCAGCACAGGAGCCTGGGTCGGCTACCAGCTGCTAGCGGCCATT
GGCTCAGGCTTCATCGTCACCTCAACCCTGCCAGCTGCCCAGGCCGCGCT
GTCCGAGGCTGACGTGGCCACCTCGACAGCAACCTGGGCATTTTGCCGCG
CATTTGGCGCCGTCTGGGGCGTCTCCATCCCGGCCGCTATCTTCAATAAT
CGATTCGCCGCGCAGGTGAGCGCGCAGAACGATACGGGACACGCGGCGCA
GGTGCTACAAAACACGGGTAACGCGTACCAGCAAGCCTCGCGGGAATTTG
TCATGCAATTTTCGCCCGAGGTTCAATCGATGATTATCGACGCGTATACC
GCAGCGCTCCAGCGAGTGTGGCAGATTTCTGTGGTGTTTGCTGGACTAGG
CTTCTTATTTGCGTGGCTGGAGAAGGAGGTGGAGTTGCGAACCACGCTGG
AGACAGAATACGGGCCGGAAAAGAAAGAGCCGTCGCCCGAGGTGGAGGAC
GTTACAGTGTCCAAGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:1637985..1639652-

>CAN33_52630-T1 ID=CAN33_52630-T1|Name=CAN33_52630-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3120bp|location=Sequence derived from alignment at NKJJ01000020.1:1637985..1639652- (Aspergillus niger FDAARGOS_311)
TACCGCCGTCCAGCCGCTCTTTGGACAATTGGCCGACGTCTTCGGTCGAC
GATGGCCCCTGATCTCCGCAGTGGCTTTCTTTGCTCTAGGCAGTGGCATC
AGCGGTGGTGCCAGTTCGACCGCGATGCTTATTGCCGGGCGCACAATCCA
GGGAGTGGGCCTCGGAGGTGTCAACATGCTCATCGACGTGGTCGTCTGTG
ATCTCGTCCCCTTACGCGAGCGAGGCCAAGTGACCGCCCTCATCTTCGTC
GTGTTCGCCGTGGGATCGTCCATCGGGCCCTTCATCGGGGGTGCCTTTAC
ACAGCACGTCACCTGGCGGTGGGCATTCTATATCAGTCTTCCAATCGCCG
GCAGCGCGATGGTGTTCATGATCCTCTTCCTCCAGGTCAAATCTCAGAAG
CACACCACCTTCGCGGACAAGATGAAACGCATTGACTGGCTAGGTAATAC
TATACTGGTCGCCGCGGTGGTAGCAGTTCTCATCGCGCTCAGTTTCGGTG
GCACCTCATACCCCTGGTCAAGCTGGCGTGTCATTGTGCCGTTAGTGCTG
GGACTCATTGGACTGATCGCCTTCGCCCTGGTGCAGGTGACGCCCAAGCT
CTGTCCAGAGCCAACCATGCCCCCTCGTCTCTTCGCGAACCGCACCACCT
TTGCCGCGTTCGTTATCAGCTTTCTGCATGGGATGCTGATGTACTGGGAG
CTATACTTCCTGCCGGTATACTTCCAAGGAGTTCAGCTAAGCACGTCGAC
TCGATCCGGAGTGGAATTGTTGCCCACTGTAATCGTCACTGTCCCTGCCG
CCATCGTTGCCGGTGCTCTTGTTACTAAGACCGGCCGGTACAAGCCCATA
CAAATCAGTGGCTTCGCCTTCATGGCCCTCGGCATGGGCCTCTTCAGCCT
TCTCGACCAGAACTCCAGCACAGGAGCCTGGGTCGGCTACCAGCTGCTAG
CGGCCATTGGCTCAGGCTTCATCGTCACCTCAACCCTGCCAGCTGCCCAG
GCCGCGCTGTCCGAGGCTGACGTGGCCACCTCGACAGCAACCTGGGCATT
TTGCCGCGCATTTGGCGCCGTCTGGGGCGTCTCCATCCCGGCCGCTATCT
TCAATAATCGATTCGCCGCGCAGGTGAGCGCGCAGAACGATACGGGACAC
GCGGCGCAGGTGCTACAAAACACGGGTAACGCGTACCAGCAAGCCTCGCG
GGAATTTGTCATGCAATTTTCGCCCGAGGTTCAATCGATGATTATCGACG
CGTATACCGCAGCGCTCCAGCGAGTGTGGCAGATTTCTGTGGTGTTTGCT
GGACTAGGCTTCTTATTTGCGTGGCTGGAGAAGGAGGTGGAGTTGCGAAC
CACGCTGGAGACAGAATACGGGCCGGAAAAGAAAGAGCCGTCGCCCGAGG
TGGAGGACGTTACAGTGTCCAAGTGAATGGCTGCTCGTGGTTGGCGATTC
TGGCTGATTATTGCTGGACTGTCAATAACATCCCTCCTCACTGCGATCGA
ATGTACGGTTCCATCGACTGCTCTGCCCACGATCTCGCGCGATTTGAACG
CAGGAGAGTCTACCGCCGTCCAGCCGCTCTTTGGACAATTGGCCGACGTC
TTCGGTCGACGATGGCCCCTGATCTCCGCAGTGGCTTTCTTTGCTCTAGG
CAGTGGCATCAGCGGTGGTGCCAGTTCGACCGCGATGCTTATTGCCGGGC
GCACAATCCAGGGAGTGGGCCTCGGAGGTGTCAACATGCTCATCGACGTG
GTCGTCTGTGATCTCGTCCCCTTACGCGAGCGAGGCCAAGTGACCGCCCT
CATCTTCGTCGTGTTCGCCGTGGGATCGTCCATCGGGCCCTTCATCGGGG
GTGCCTTTACACAGCACGTCACCTGGCGGTGGGCATTCTATATCAGTCTT
CCAATCGCCGGCAGCGCGATGGTGTTCATGATCCTCTTCCTCCAGGTCAA
ATCTCAGAAGCACACCACCTTCGCGGACAAGATGAAACGCATTGACTGGC
TAGGTAATACTATACTGGTCGCCGCGGTGGTAGCAGTTCTCATCGCGCTC
AGTTTCGGTGGCACCTCATACCCCTGGTCAAGCTGGCGTGTCATTGTGCC
GTTAGTGCTGGGACTCATTGGACTGATCGCCTTCGCCCTGGTGCAGGTGA
CGCCCAAGCTCTGTCCAGAGCCAACCATGCCCCCTCGTCTCTTCGCGAAC
CGCACCACCTTTGCCGCGTTCGTTATCAGCTTTCTGCATGGGATGCTGAT
GTACTGGGAGCTATACTTCCTGCCGGTATACTTCCAAGGAGTTCAGCTAA
GCACGTCGACTCGATCCGGAGTGGAATTGTTGCCCACTGTAATCGTCACT
GTCCCTGCCGCCATCGTTGCCGGTGCTCTTGTTACTAAGACCGGCCGGTA
CAAGCCCATACAAATCAGTGGCTTCGCCTTCATGGCCCTCGGCATGGGCC
TCTTCAGCCTTCTCGACCAGAACTCCAGCACAGGAGCCTGGGTCGGCTAC
CAGCTGCTAGCGGCCATTGGCTCAGGCTTCATCGTCACCTCAACCCTGCC
AGCTGCCCAGGCCGCGCTGTCCGAGGCTGACGTGGCCACCTCGACAGCAA
CCTGGGCATTTTGCCGCGCATTTGGCGCCGTCTGGGGCGTCTCCATCCCG
GCCGCTATCTTCAATAATCGATTCGCCGCGCAGGTGAGCGCGCAGAACGA
TACGGGACACGCGGCGCAGGTGCTACAAAACACGGGTAACGCGTACCAGC
AAGCCTCGCGGGAATTTGTCATGCAATTTTCGCCCGAGGTTCAATCGATG
ATTATCGACGCGTATACCGCAGCGCTCCAGCGAGTGTGGCAGATTTCTGT
GGTGTTTGCTGGACTAGGCTTCTTATTTGCGTGGCTGGAGAAGGAGGTGG
AGTTGCGAACCACGCTGGAGACAGAATACGGGCCGGAAAAGAAAGAGCCG
TCGCCCGAGGTGGAGGACGTTACAGTGTCCAAGTGAATGGCTGCTCGTGG
TTGGCGATTCTGGCTGATTATTGCTGGACTGTCAATAACATCCCTCCTCA
CTGCGATCGAATGTACGGTTCCATCGACTGCTCTGCCCACGATCTCGCGC
GATTTGAACGCAGGAGAGTC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52630CAN33_52630Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52630-T1CAN33_52630-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52630-T1.cdsCAN33_52630-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52630-T1.exon2CAN33_52630-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52630-T1.exon1CAN33_52630-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000201.4
NoteantiSMASH:Cluster_10000201.5
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-23)
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Productmajor facilitator superfamily protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1637985..1639652 -
Powered by Drupal