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CAN33_52660-T1, CAN33_52660-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52660-T1
Unique NameCAN33_52660-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1669454..1670420-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52660-T1 ID=CAN33_52660-T1|Name=CAN33_52660-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=967bp|location=Sequence derived from alignment at NKJJ01000020.1:1669454..1670420- (Aspergillus niger FDAARGOS_311)
ATGGCCACCGAACTTTGGTACGTAATCACCTCACCTACTCCTTTTCCCAG
CATCCCAACCATTGTGCCCTCTTGTATCTCGACTTTAATAATGTTACGGA
TGATTCTCGACTTGATATACTGACATATGGACTTGATAGCCCCGTTTACG
CAGTAAGTCACTTGTGATCCCACCCTCACCGATGACACCATCGAGCTCCA
AGCGACCCTCAAGGTAGCTTGGCTTCGTTGCATCAAGCGGAGAATCTGCC
ATCGAACAAGCATCTCTCGACACGGTTAACTGATCTCCAACTTGTATAGC
CCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCACCTGCTTC
GGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATGGC
CGTCCTCAGACCTGACCTGATCGTCAAGAGTACGTGGAAGCTTCACAGAG
CTTTATACCACTGGGATATGCCATCGCATATAATTTCGGATGATGTGATA
CTAATCTCGTGATACAGACATTGTCCCCATTGTCATGGCGGGTATCATTG
GTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAG
AAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGT
CGGTTTGGCTGGTATGGCAGCTGGGTAAGCTTCTCAACATGGCACCTTTC
AGTTCCGGTAAGCTTGGGACTAATTCAGTATCTCTAGTTTTGCCATTGGT
ATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAACAGCCCCGTCTCTA
TGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGGTGAGTCAC
AACAACATAGCGATATAATTGGTCTGCCCCATCTAACAAGGATGTTTTAC
AGGTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGA
TCGACGCCACTTGCTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1669454..1670420-

>CAN33_52660-T1 ID=CAN33_52660-T1|Name=CAN33_52660-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3510bp|location=Sequence derived from alignment at NKJJ01000020.1:1669454..1670420- (Aspergillus niger FDAARGOS_311)
GTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATC
GACGCCACTTGCTAATTTTGCCATTGGTATCGTTGGTGACGCAGGTGTCC
GTGGAACTGCTCAACAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTC
ATTTTCGCTGAAGTCTTGGACATTGTCCCCATTGTCATGGCGGGTATCAT
TGGTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGAC
AGAAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCC
GTCGGTTTGGCTGGTATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGC
ACCTCGGCCATCGTCTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAA
GGCTGGTGTCGGTGTCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCG
TCAAGATCACTTGTGATCCCACCCTCACCGATGACACCATCGAGCTCCAA
GCGACCCTCAAGATGGCCACCGAACTTTGGTACGTAATCACCTCACCTAC
TCCTTTTCCCAGCATCCCAACCATTGTGCCCTCTTGTCTGTACGGTCTTA
TCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATCGACGCCACTTGCTAA
TTTTGCCATTGGTATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAAC
AGCCCCGTCTCTATGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTC
TTGGACATTGTCCCCATTGTCATGGCGGGTATCATTGGTATCTACGGTCT
GGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAGAAGGTCCCCTTGT
ACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGGT
ATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTC
TTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGT
CTGTGGAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGATCACTTGTG
ATCCCACCCTCACCGATGACACCATCGAGCTCCAAGCGACCCTCAAGATG
GCCACCGAACTTTGGTACGTAATCACCTCACCTACTCCTTTTCCCAGCAT
CCCAACCATTGTGCCCTCTTGTCTGTACGGTCTTATCGTTGCTCTTCTGA
TGAACTCCCGTTCGAGGATCGACGCCACTTGCTAATTTTGCCATTGGTAT
CGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAACAGCCCCGTCTCTATG
TCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGACATTGTCCCC
ATTGTCATGGCGGGTATCATTGGTATCTACGGTCTGGTCGTGTCGGTCCT
GATTGCAAACGATTTGGGACAGAAGGTCCCCTTGTACACTGGTTTCATTC
AGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGGTATGGCAGCTGGCCCT
TTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCACCTGCTTCGGA
GCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATGGCCGT
CCTCAGACCTGACCTGATCGTCAAGATCACTTGTGATCCCACCCTCACCG
ATGACACCATCGAGCTCCAAGCGACCCTCAAGATGGCCACCGAACTTTGG
TACGTAATCACCTCACCTACTCCTTTTCCCAGCATCCCAACCATTGTGCC
CTCTTGTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGA
GGATCGACGCCACTTGCTAATTTTGCCATTGGTATCGTTGGTGACGCAGG
TGTCCGTGGAACTGCTCAACAGCCCCGTCTCTATGTCGGAATGATTTTGA
TTCTCATTTTCGCTGAAGTCTTGGACATTGTCCCCATTGTCATGGCGGGT
ATCATTGGTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTT
GGGACAGAAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTC
TCGCCGTCGGTTTGGCTGGTATGGCAGCTGGCCCTTTTTCGGTGCCCTTG
GCTGCACCTCGGCCATCGTCTTCACCTGCTTCGGAGCTGCCTATGGAACT
GCCAAGGCTGGTGTCGGTGTCTGTGGAATGGCCGTCCTCAGACCTGACCT
GATCGTCAAGATCACTTGTGATCCCACCCTCACCGATGACACCATCGAGC
TCCAAGCGACCCTCAAGATGGCCACCGAACTTTGGTACGTAATCACCTCA
CCTACTCCTTTTCCCAGCATCCCAACCATTGTGCCCTCTTGTCTGTACGG
TCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATCGACGCCACTT
GCTAATTTTGCCATTGGTATCGTTGGTGACGCAGGTGTCCGTGGAACTGC
TCAACAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTCATTTTCGCTG
AAGTCTTGGACATTGTCCCCATTGTCATGGCGGGTATCATTGGTATCTAC
GGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAGAAGGTCCC
CTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGG
CTGGTATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCA
TCGTCTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTC
GGTGTCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGATCAC
TTGTGATCCCACCCTCACCGATGACACCATCGAGCTCCAAGCGACCCTCA
AGATGGCCACCGAACTTTGGTACGTAATCACCTCACCTACTCCTTTTCCC
AGCATCCCAACCATTGTGCCCTCTTGTCTGTACGGTCTTATCGTTGCTCT
TCTGATGAACTCCCGTTCGAGGATCGACGCCACTTGCTAATTTTGCCATT
GGTATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAACAGCCCCGTCT
CTATGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGACATTG
TCCCCATTGTCATGGCGGGTATCATTGGTATCTACGGTCTGGTCGTGTCG
GTCCTGATTGCAAACGATTTGGGACAGAAGGTCCCCTTGTACACTGGTTT
CATTCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGGTATGGCAGCTG
GCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCACCTGCT
TCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATG
GCCGTCCTCAGACCTGACCTGATCGTCAAGATCACTTGTGATCCCACCCT
CACCGATGACACCATCGAGCTCCAAGCGACCCTCAAGATGGCCACCGAAC
TTTGGTACGTAATCACCTCACCTACTCCTTTTCCCAGCATCCCAACCATT
GTGCCCTCTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA3_2CAN33_52660Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52660-T1CAN33_52660-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52660-T1.cdsCAN33_52660-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52660-T1.exon6CAN33_52660-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_52660-T1.exon5CAN33_52660-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_52660-T1.exon4CAN33_52660-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_52660-T1.exon3CAN33_52660-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_52660-T1.exon2CAN33_52660-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52660-T1.exon1CAN33_52660-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000201.4
NoteantiSMASH:Cluster_10000201.5
DBxrefInterPro:IPR035921
DBxrefInterPro:IPR011555
DBxrefInterPro:IPR002379
DBxrefInterPro:IPR000245
DBxrefPFAM:PF00137
ProductH( )-transporting V0 sector ATPase subunit c
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1669454..1670420 -
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