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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1685294..1687264+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_52690-T1 ID=CAN33_52690-T1|Name=CAN33_52690-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1971bp|location=Sequence derived from alignment at NKJJ01000020.1:1685294..1687264+ (Aspergillus niger FDAARGOS_311)
ATGTTTGCACCACTCGGTCTATTCAAGGATATACCTTGTCCTGAAGGGCA
AAATTGCTTGCTCTTGACCTGCATCTTCTCTCACCGGGACGTCGCCTCCA
CATCAGCCTCCCAAGGAGGCCGTCAGAACACTCATATACCAAGAACAGTC
AAGAACGAAATAGGAACAACATCAGGCGAAACAGCTGTCGAACCCAAAGC
ACATGCTCCGGGTGACGAGAAAAAGGCCAAGGCAGTTGGCAAGCCGGCAT
CTTCGCCCGCTAAAGAGGCACTCAGTCAAGGTTCTGTGTCAAAAGCTCCG
TCGAACAAGCCATCCCAATTCAATGGCCAAGCCAACGTCAAGCTTCAGTC
CTTATTAAGGGAAGTTACGCCTCCAGCAAAGCCAACGTCTACATCAGCCA
AAGCAAGCGCTCCCGGCTCTCGAAAATCTCTCCCACCAAGGCAAGCACCG
CGAGAAAGCCTAAACCCTCGGATGCTGACGAAAGCACCCGCGCCCCATGG
TGTGCGTCTGGCCATCCTCACCAAGTTGCATGCCGGTATGTCTGCTCTAA
ATGACAAGTTGGCCAAAGACAAAGAAAGCCAGGACAAATATCTTGTTCTC
ACGCCGAATGAGCTTATCACAATGGCCTTGGATGAAGAGGAAAAGACCGC
CAAAGAGAATCCAAGCATATACTCTAATGTCATCAAGCTCCGTATAGTAA
AGCTCTCAAAGATGAGCAAGGAAGAATGGGCCAATGACGTCAAAACCCAC
CTTAATGAGCGTTATTACAAGATTGCGCCCGGGCCAGAACAGTCAAAACC
GAAACCTCTTGACACTGGGCTTAGTGCAAAGGAAGAGATAGCATTGGCGA
GTAAGCTTGTGACACGTCTGGAAGGTCTCGAGCAGTACGGCTACGTTACA
AAACCTCCGACGGACGCTGAAGTGGAAGGTGCCAGGAAAGGTGTTATTGA
ATCCAAGGGATGGGAAAAGTGCGATCGGTGTGGAGGCAGGTTCCAAGTCT
TCCCTGGTCGTCGGGAGGATGGAACCTTGACGACTGGAGGGCAATGCACA
TATCACCCGGGCAAACCTCTCTATCCGCCCAAGAAGAAGACCGATCACAT
CACGGGGCACAAAGATGCATACTTCTCGTGCTGCAACGAGTCAGTGGGAA
CTTCTGCTGGCTGTACCAAGGGCAAGACCCATGTATTCAAGGTATCGGAA
ACCAAACGACTCGCATCAGTATTCCAGTTTCAGAAAACCCCGGAACAACC
AGAGAAGGGGCGACTCCCACCAGTTTGCTTCGACTGTGAAATGGGTTACA
CGACACTGGGATTGGAACTGATTCGGTTAACCGCTGTTAGCTGGCCTCAA
GGCAAGACGCTCTTGGATATCTTGGTCAGACCCATCGGTGAAGTGTTGGA
TTTGAATTCCCGGTTTTCTGGTGTTTTCCCAGAGCACTACACGAAGGCCA
TTCCCTATGGGAGCTCTGGCTCTCAGACGATTTCACAGTTGGAGGACGGG
GAAGTGGACTCGCCTCCATTGCAGATTGTCGAGTCGCCTGCTGCAGCCCG
GGCGCTTCTATTTGAATGTCTTCAACCAGATACGCCACTCATTGGTCATG
CGATCGATAATGACCTCAATGCGTGCCGCATCATTCATCCGACAATCATT
GATACTGTGCTCCTCTACCCACATCCCCGGGGCTTACCTCTCCGTATGAG
CTTGAAGACTCTATGTCGAAGACACCTAGATCGAGACATCCAAACGGGAG
GCAGCAGCGGCCATGACTCAAAGGAAGACTCGATCGCTACGGGTGATCTG
GTGAGGGTCAAGGCAGCAGAGACGTGGAAGGTCCTCAAGTCTAAAGGCTG
GCGCATACATAACGACCAGCTTGTGCCTCCACCAGGCGCCGATGCGGAAG
CTGCTGCAGCACATGGAAGGCTTGGATCGGGAGCGGGTCAAAAGCGGGCA
AGCTCGGCGTTGGGAGATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1685294..1687264+ >CAN33_52690-T1 ID=CAN33_52690-T1|Name=CAN33_52690-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1971bp|location=Sequence derived from alignment at NKJJ01000020.1:1685294..1687264+ (Aspergillus niger FDAARGOS_311)
ATGTTTGCACCACTCGGTCTATTCAAGGATATACCTTGTCCTGAAGGGCA
AAATTGCTTGCTCTTGACCTGCATCTTCTCTCACCGGGACGTCGCCTCCA
CATCAGCCTCCCAAGGAGGCCGTCAGAACACTCATATACCAAGAACAGTC
AAGAACGAAATAGGAACAACATCAGGCGAAACAGCTGTCGAACCCAAAGC
ACATGCTCCGGGTGACGAGAAAAAGGCCAAGGCAGTTGGCAAGCCGGCAT
CTTCGCCCGCTAAAGAGGCACTCAGTCAAGGTTCTGTGTCAAAAGCTCCG
TCGAACAAGCCATCCCAATTCAATGGCCAAGCCAACGTCAAGCTTCAGTC
CTTATTAAGGGAAGTTACGCCTCCAGCAAAGCCAACGTCTACATCAGCCA
AAGCAAGCGCTCCCGGCTCTCGAAAATCTCTCCCACCAAGGCAAGCACCG
CGAGAAAGCCTAAACCCTCGGATGCTGACGAAAGCACCCGCGCCCCATGG
TGTGCGTCTGGCCATCCTCACCAAGTTGCATGCCGGTATGTCTGCTCTAA
ATGACAAGTTGGCCAAAGACAAAGAAAGCCAGGACAAATATCTTGTTCTC
ACGCCGAATGAGCTTATCACAATGGCCTTGGATGAAGAGGAAAAGACCGC
CAAAGAGAATCCAAGCATATACTCTAATGTCATCAAGCTCCGTATAGTAA
AGCTCTCAAAGATGAGCAAGGAAGAATGGGCCAATGACGTCAAAACCCAC
CTTAATGAGCGTTATTACAAGATTGCGCCCGGGCCAGAACAGTCAAAACC
GAAACCTCTTGACACTGGGCTTAGTGCAAAGGAAGAGATAGCATTGGCGA
GTAAGCTTGTGACACGTCTGGAAGGTCTCGAGCAGTACGGCTACGTTACA
AAACCTCCGACGGACGCTGAAGTGGAAGGTGCCAGGAAAGGTGTTATTGA
ATCCAAGGGATGGGAAAAGTGCGATCGGTGTGGAGGCAGGTTCCAAGTCT
TCCCTGGTCGTCGGGAGGATGGAACCTTGACGACTGGAGGGCAATGCACA
TATCACCCGGGCAAACCTCTCTATCCGCCCAAGAAGAAGACCGATCACAT
CACGGGGCACAAAGATGCATACTTCTCGTGCTGCAACGAGTCAGTGGGAA
CTTCTGCTGGCTGTACCAAGGGCAAGACCCATGTATTCAAGGTATCGGAA
ACCAAACGACTCGCATCAGTATTCCAGTTTCAGAAAACCCCGGAACAACC
AGAGAAGGGGCGACTCCCACCAGTTTGCTTCGACTGTGAAATGGGTTACA
CGACACTGGGATTGGAACTGATTCGGTTAACCGCTGTTAGCTGGCCTCAA
GGCAAGACGCTCTTGGATATCTTGGTCAGACCCATCGGTGAAGTGTTGGA
TTTGAATTCCCGGTTTTCTGGTGTTTTCCCAGAGCACTACACGAAGGCCA
TTCCCTATGGGAGCTCTGGCTCTCAGACGATTTCACAGTTGGAGGACGGG
GAAGTGGACTCGCCTCCATTGCAGATTGTCGAGTCGCCTGCTGCAGCCCG
GGCGCTTCTATTTGAATGTCTTCAACCAGATACGCCACTCATTGGTCATG
CGATCGATAATGACCTCAATGCGTGCCGCATCATTCATCCGACAATCATT
GATACTGTGCTCCTCTACCCACATCCCCGGGGCTTACCTCTCCGTATGAG
CTTGAAGACTCTATGTCGAAGACACCTAGATCGAGACATCCAAACGGGAG
GCAGCAGCGGCCATGACTCAAAGGAAGACTCGATCGCTACGGGTGATCTG
GTGAGGGTCAAGGCAGCAGAGACGTGGAAGGTCCTCAAGTCTAAAGGCTG
GCGCATACATAACGACCAGCTTGTGCCTCCACCAGGCGCCGATGCGGAAG
CTGCTGCAGCACATGGAAGGCTTGGATCGGGAGCGGGTCAAAAGCGGGCA
AGCTCGGCGTTGGGAGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR034922 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR013520 |
| Product | RNA exonuclease 3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1685294..1687264 + |
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