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CAN33_52700-T1, CAN33_52700-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52700-T1
Unique NameCAN33_52700-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1689220..1689941+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52700-T1 ID=CAN33_52700-T1|Name=CAN33_52700-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=722bp|location=Sequence derived from alignment at NKJJ01000020.1:1689220..1689941+ (Aspergillus niger FDAARGOS_311)
ATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCA
GGCTATCCTTTCCGAGGAGGACAGACTTGTGGTGTGTATACATATCACCA
AGTCATGGCTGCGAAGCATATCATATCATACTAACCAAACGTATAAAGGT
CATCCGATTCGGTCGCGATCACGATGTCGACTGTACGACGTCACAAATCT
CCCTGATCACACTATGGGTGTAAGCTAACGCAGTGAATCGCAGGCATGCG
TCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAGTACGTCAA
GAAATCCTTTATCCATTCCTCCTTCCCAAAACGACTTTCTCCGGCAAGAA
GAAATTCGCAGTGACTAACCCCCAACCAGACTTCGCCGTAATCTACCTCT
GCGACATCGACGAGGTACCCGAGTTCAACACGATGTACGAACTCTTCGAC
CCAATGACCATCATGTTTTTCTACCGGAATAAGCACATGATGTGCGATTT
CGGCACAGGTAACAACAACAAGTTGAACTGGGTGCTTGAAGACAAGCAGG
AGATGATCGATATCATCGAGACCATCTACAAGGGCGCGAAGAAGGGACGT
GGTCTGGTCGTCAGCCCGAAGGGTAAGTCTATATACTGTCTTGATTGTCT
TCTTACTGGCTGGATGGTTTTGGCTGATGCATGATATCTGCTGTAGATTA
CTCGACGAGGTACCGTTACTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1689220..1689941+

>CAN33_52700-T1 ID=CAN33_52700-T1|Name=CAN33_52700-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2160bp|location=Sequence derived from alignment at NKJJ01000020.1:1689220..1689941+ (Aspergillus niger FDAARGOS_311)
ATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCA
GGCTATCCTTTCCGAGGAGGACAGACTTGTGGTCATCCGATTCGGTCGCG
ATCACGATGTCGACTGCATGCGTCAGGACGAAGTCCTTTTCAAGATCGCT
GAACGTGTGAAGAACTTCGCCGTAATCTACCTCTGCGACATCGACGAGGT
ACCCGAGTTCAACACGATGTACGAACTCTTCGACCCAATGACCATCATGT
TTTTCTACCGGAATAAGCACATGATGTGCGATTTCGGCACAGGTAACAAC
AACAAGTTGAACTGGGTGCTTGAAGACAAGCAGGAGATGATCGATATCAT
CGAGACCATCTACAAGGGCGCGAAGAAGGGACGTGGTCTGGTCGTCAGCC
CGAAGGATTACTCGACGAGGTACCGTTACTGAATGGGTTCCGTCGTTCTG
CCACATCTGCGTACAGCCTGGCACGTCGACCAGGCTATCCTTTCCGAGGA
GGACAGACTTGTGGTCATCCGATTCGGTCGCGATCACGATGTCGACTGCA
TGCGTCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAACTTC
GCCGTAATCTACCTCTGCGACATCGACGAGGTACCCGAGTTCAACACGAT
GTACGAACTCTTCGACCCAATGACCATCATGTTTTTCTACCGGAATAAGC
ACATGATGTGCGATTTCGGCACAGGTAACAACAACAAGTTGAACTGGGTG
CTTGAAGACAAGCAGGAGATGATCGATATCATCGAGACCATCTACAAGGG
CGCGAAGAAGGGACGTGGTCTGGTCGTCAGCCCGAAGGATTACTCGACGA
GGTACCGTTACTGAATGGGTTCCGTCGTTCTGCCACATCTGCGTACAGCC
TGGCACGTCGACCAGGCTATCCTTTCCGAGGAGGACAGACTTGTGGTCAT
CCGATTCGGTCGCGATCACGATGTCGACTGCATGCGTCAGGACGAAGTCC
TTTTCAAGATCGCTGAACGTGTGAAGAACTTCGCCGTAATCTACCTCTGC
GACATCGACGAGGTACCCGAGTTCAACACGATGTACGAACTCTTCGACCC
AATGACCATCATGTTTTTCTACCGGAATAAGCACATGATGTGCGATTTCG
GCACAGGTAACAACAACAAGTTGAACTGGGTGCTTGAAGACAAGCAGGAG
ATGATCGATATCATCGAGACCATCTACAAGGGCGCGAAGAAGGGACGTGG
TCTGGTCGTCAGCCCGAAGGATTACTCGACGAGGTACCGTTACTGAATGG
GTTCCGTCGTTCTGCCACATCTGCGTACAGCCTGGCACGTCGACCAGGCT
ATCCTTTCCGAGGAGGACAGACTTGTGGTCATCCGATTCGGTCGCGATCA
CGATGTCGACTGCATGCGTCAGGACGAAGTCCTTTTCAAGATCGCTGAAC
GTGTGAAGAACTTCGCCGTAATCTACCTCTGCGACATCGACGAGGTACCC
GAGTTCAACACGATGTACGAACTCTTCGACCCAATGACCATCATGTTTTT
CTACCGGAATAAGCACATGATGTGCGATTTCGGCACAGGTAACAACAACA
AGTTGAACTGGGTGCTTGAAGACAAGCAGGAGATGATCGATATCATCGAG
ACCATCTACAAGGGCGCGAAGAAGGGACGTGGTCTGGTCGTCAGCCCGAA
GGATTACTCGACGAGGTACCGTTACTGAATGGGTTCCGTCGTTCTGCCAC
ATCTGCGTACAGCCTGGCACGTCGACCAGGCTATCCTTTCCGAGGAGGAC
AGACTTGTGGTCATCCGATTCGGTCGCGATCACGATGTCGACTGCATGCG
TCAGGACGAAGTCCTTTTCAAGATCGCTGAACGTGTGAAGAACTTCGCCG
TAATCTACCTCTGCGACATCGACGAGGTACCCGAGTTCAACACGATGTAC
GAACTCTTCGACCCAATGACCATCATGTTTTTCTACCGGAATAAGCACAT
GATGTGCGATTTCGGCACAGGTAACAACAACAAGTTGAACTGGGTGCTTG
AAGACAAGCAGGAGATGATCGATATCATCGAGACCATCTACAAGGGCGCG
AAGAAGGGACGTGGTCTGGTCGTCAGCCCGAAGGATTACTCGACGAGGTA
CCGTTACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0046540U4/U6 x U5 tri-snRNP complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DIM1_2CAN33_52700Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52700-T1CAN33_52700-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52700-T1.exon1CAN33_52700-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_52700-T1.exon2CAN33_52700-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52700-T1.exon3CAN33_52700-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_52700-T1.exon4CAN33_52700-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_52700-T1.exon5CAN33_52700-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52700-T1.cdsCAN33_52700-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteBUSCO:EOG0926506U
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR004123
DBxrefPFAM:PF02966
ProductDimethyladenosine transferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1689220..1689941 +
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