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CAN33_52885-T1, CAN33_52885-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52885-T1
Unique NameCAN33_52885-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1795901..1796712-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52885-T1 ID=CAN33_52885-T1|Name=CAN33_52885-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=812bp|location=Sequence derived from alignment at NKJJ01000020.1:1795901..1796712- (Aspergillus niger FDAARGOS_311)
ATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTTGGTACGAAGGA
GATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAAGACCAGTAAGT
TTGATCCTCGATCTCCGTCCACCCATCGACTATGGCAATGTAAAAACTAA
CATGTTGCGTTAGCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGT
CACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGA
ATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCC
CTCTGGAGACACTACTATTCTGGTACTTTTCCCCTTATCGCGTATTTTCA
ACGAATCGTGGGGCAAGTGGCTGACATTGGGTGAAATCTTCAGGTACACA
AGGTTTGATCTTCGTTGTGGACTCCAGCGACACTGCTCGTTTGGAGGAGG
CTCGCTCCGAGCTTCACAAGATTATCAACGATCGCGAAATGAAGGATGCT
CTCTTGCTGGTCTTTGCCAATAAGCAGGATGTTCAAGGCCGTAAGTTTCC
ACCTTTAGGTTATAGATATCGACGTCGCGACTGACCAGGATTTTTCTTGC
AGACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGA
AGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGT
ATCTTCGAGGGCCTGGTAAGTTACACGCCCCCTCATTATTGCTTTGCCAT
CTAACGATCGATTGTCGCAGGCATGGCTCTCCAACAACGTGAAGACGCAA
CCCCAGAAATAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1795901..1796712-

>CAN33_52885-T1 ID=CAN33_52885-T1|Name=CAN33_52885-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2775bp|location=Sequence derived from alignment at NKJJ01000020.1:1795901..1796712- (Aspergillus niger FDAARGOS_311)
GCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAATAAACATGAGT
CCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGAAGGATAAGCT
GTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGTATCTTCGAGG
GCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGACACTGCTC
GTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACGATCGCGAA
ATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGATGTTCAAGG
CCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCACTATCC
CTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGAAGTTC
AATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGGAGACA
CTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTT
GGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAA
GACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAATAAACA
TGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGAAGGAT
AAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGTATCTT
CGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGACAC
TGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACGATC
GCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGATGTT
CAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCAC
TATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGA
AGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGG
AGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGA
TTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCT
GGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAAT
AAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGA
AGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGT
ATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGC
GACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAA
CGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGG
ATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTC
ACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAA
TGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCC
TCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGG
GAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATG
CTGCTGGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCA
GAAATAAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAA
GTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAA
CTGGTATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACT
CCAGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATT
ATCAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAA
GCAGGATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGG
ACGTCACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTAT
AAGAATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAG
ACCCCTCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATT
ATGGGGAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTT
GGATGCTGCTGGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAA
CCCCAGAAATAAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTC
ACCAAGTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGA
GGGAACTGGTATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGT
GGACTCCAGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACA
AGATTATCAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCC
AATAAGCAGGATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAA
TCAGGACGTCACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCA
CCTATAAGAATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAG
ATCAGACCCCTCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCA
AGATTATGGGGAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTG
GGTTTGGATGCTGCTGGAAAGACCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARF6CAN33_52885Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52885-T1CAN33_52885-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52885-T1.cdsCAN33_52885-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52885-T1.exon5CAN33_52885-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_52885-T1.exon4CAN33_52885-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_52885-T1.exon3CAN33_52885-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_52885-T1.exon2CAN33_52885-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52885-T1.exon1CAN33_52885-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264RJ7
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR041838
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Product Arf Arf6
ProductADP-ribosylation factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1795901..1796712 -
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