|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1858701..1859598- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_52990-T1 ID=CAN33_52990-T1|Name=CAN33_52990-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=898bp|location=Sequence derived from alignment at NKJJ01000020.1:1858701..1859598- (Aspergillus niger FDAARGOS_311)
ATGGCCAAGCTGGAACCCTACGTGCCAGGCTACTACCTGTGGAGCTACAT
GCCCTCCGTTCCGGCAGCGGTTATCTTTTTCGTCCTCTTCCTGGGGGCCA
CCGGAATCCACTTCTTCAAGCTAATCCGATCTCGAGCATGGTTCAATATC
CCCTTAGCCATTGGCGGCATTTGTATGTATTCCCTGTTATACTTATATAC
TCCACAAAAGACAGCCTTATGAACTAACACACAGTACAGTTGAGCTTATC
GGATTCATCGCAAGAATAATTTCGCATTTCCATACAGCGGATCTTGGGCC
TTACTGTATGCAGAGCGTGCTCATTCTCCTCGCTCCAGTTCTCTTCGCCG
CATCTGTATACATGACGCTAGGTCGGATCATACGGAGAGTCAACGGAGAG
CAACACTCTCTAATCCCCCTTCGTTGGTTGACGAGGGTCTTTGTCACGAG
CGATGTTCTTGCCTTCCTCATTCAAGGCAACGGAGCGGGCTTGCAGGTGA
TGGATTCAATGCAGACCTTATCGAAAGTCATTGTTATAGTCGGCCTTGTC
TTCCAAGTGGGCATGTTCGCTTTCTTCATCATTGTCTCGCTTGTATTCCA
CAAGCGTATGCAAAAGCGTCCGACATCCGATGCACAGTCACCGTGGAAAT
TTCACATGTATACGCTCTTCGCGGTCAGTGGTCTCATCCTGGTTCGGTCG
ATTTACCGTGTTGTTGAATATGCGATGGGGTATAACGGCTACCTCTTGAC
GAATGAGTGGCCACTCTATGTGTTTGACTCTGTGTTGATGTGGCTTGTTA
TGGCGATTTGGGCTACGAGATATCCTGGCGATATTCAGACAGGGAAGCCT
GAGATGGAGCTCCTTGCGACAAGGAGTGATGATGATACGACTGTATGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1858701..1859598- >CAN33_52990-T1 ID=CAN33_52990-T1|Name=CAN33_52990-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1662bp|location=Sequence derived from alignment at NKJJ01000020.1:1858701..1859598- (Aspergillus niger FDAARGOS_311)
TTGAGCTTATCGGATTCATCGCAAGAATAATTTCGCATTTCCATACAGCG
GATCTTGGGCCTTACTGTATGCAGAGCGTGCTCATTCTCCTCGCTCCAGT
TCTCTTCGCCGCATCTGTATACATGACGCTAGGTCGGATCATACGGAGAG
TCAACGGAGAGCAACACTCTCTAATCCCCCTTCGTTGGTTGACGAGGGTC
TTTGTCACGAGCGATGTTCTTGCCTTCCTCATTCAAGGCAACGGAGCGGG
CTTGCAGGTGATGGATTCAATGCAGACCTTATCGAAAGTCATTGTTATAG
TCGGCCTTGTCTTCCAAGTGGGCATGTTCGCTTTCTTCATCATTGTCTCG
CTTGTATTCCACAAGCGTATGCAAAAGCGTCCGACATCCGATGCACAGTC
ACCGTGGAAATTTCACATGTATACGCTCTTCGCGGTCAGTGGTCTCATCC
TGGTTCGGTCGATTTACCGTGTTGTTGAATATGCGATGGGGTATAACGGC
TACCTCTTGACGAATGAGTGGCCACTCTATGTGTTTGACTCTGTGTTGAT
GTGGCTTGTTATGGCGATTTGGGCTACGAGATATCCTGGCGATATTCAGA
CAGGGAAGCCTGAGATGGAGCTCCTTGCGACAAGGAGTGATGATGATACG
ACTGTATGAATGGCCAAGCTGGAACCCTACGTGCCAGGCTACTACCTGTG
GAGCTACATGCCCTCCGTTCCGGCAGCGGTTATCTTTTTCGTCCTCTTCC
TGGGGGCCACCGGAATCCACTTCTTCAAGCTAATCCGATCTCGAGCATGG
TTCAATATCCCCTTAGCCATTGGCGGCATTTTTGAGCTTATCGGATTCAT
CGCAAGAATAATTTCGCATTTCCATACAGCGGATCTTGGGCCTTACTGTA
TGCAGAGCGTGCTCATTCTCCTCGCTCCAGTTCTCTTCGCCGCATCTGTA
TACATGACGCTAGGTCGGATCATACGGAGAGTCAACGGAGAGCAACACTC
TCTAATCCCCCTTCGTTGGTTGACGAGGGTCTTTGTCACGAGCGATGTTC
TTGCCTTCCTCATTCAAGGCAACGGAGCGGGCTTGCAGGTGATGGATTCA
ATGCAGACCTTATCGAAAGTCATTGTTATAGTCGGCCTTGTCTTCCAAGT
GGGCATGTTCGCTTTCTTCATCATTGTCTCGCTTGTATTCCACAAGCGTA
TGCAAAAGCGTCCGACATCCGATGCACAGTCACCGTGGAAATTTCACATG
TATACGCTCTTCGCGGTCAGTGGTCTCATCCTGGTTCGGTCGATTTACCG
TGTTGTTGAATATGCGATGGGGTATAACGGCTACCTCTTGACGAATGAGT
GGCCACTCTATGTGTTTGACTCTGTGTTGATGTGGCTTGTTATGGCGATT
TGGGCTACGAGATATCCTGGCGATATTCAGACAGGGAAGCCTGAGATGGA
GCTCCTTGCGACAAGGAGTGATGATGATACGACTGTATGAATGGCCAAGC
TGGAACCCTACGTGCCAGGCTACTACCTGTGGAGCTACATGCCCTCCGTT
CCGGCAGCGGTTATCTTTTTCGTCCTCTTCCTGGGGGCCACCGGAATCCA
CTTCTTCAAGCTAATCCGATCTCGAGCATGGTTCAATATCCCCTTAGCCA
TTGGCGGCATTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1858701..1859598 - |
|
